RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 KIF20BQ96Q89 1820 aa30.29■■■□□ 2.44
ACTB-203ENST00000417101 PRIM1P49642 420 aaKnown RBP30.29■■■□□ 2.44
ACTB-203ENST00000417101 MYOM1P52179 1685 aa30.28■■■□□ 2.44
ACTB-203ENST00000417101 INSRP06213 1382 aa30.28■■■□□ 2.44
ACTB-203ENST00000417101 PAPPAQ13219 1627 aa30.27■■■□□ 2.44
ACTB-203ENST00000417101 RAPGEF4Q8WZA2 1011 aa30.27■■■□□ 2.44
ACTB-203ENST00000417101 FLT4P35916 1363 aa30.27■■■□□ 2.44
ACTB-203ENST00000417101 ZNF827Q17R98 1081 aa30.26■■■□□ 2.43
ACTB-203ENST00000417101 MTFR1LQ9H019 292 aa30.26■■■□□ 2.43
ACTB-203ENST00000417101 CGNL1Q0VF96 1302 aa30.24■■■□□ 2.43
ACTB-203ENST00000417101 SLC27A3Q5K4L6 730 aa30.24■■■□□ 2.43
ACTB-203ENST00000417101 KIF24Q5T7B8 1368 aa30.24■■■□□ 2.43
ACTB-203ENST00000417101 SHANK3Q9BYB0 1731 aa30.23■■■□□ 2.43
ACTB-203ENST00000417101 DCAF8L1A6NGE4 600 aa30.23■■■□□ 2.43
ACTB-203ENST00000417101 EMILIN1Q9Y6C2 1016 aa30.23■■■□□ 2.43
ACTB-203ENST00000417101 TATP17735 454 aaPredicted RBP30.22■■■□□ 2.43
ACTB-203ENST00000417101 POLR3GLQ9BT43 218 aa30.22■■■□□ 2.43
ACTB-203ENST00000417101 DOT1LQ8TEK3 1739 aa30.22■■■□□ 2.43
ACTB-203ENST00000417101 NSD2O96028 1365 aa30.21■■■□□ 2.43
ACTB-203ENST00000417101 KCNQ4P56696 695 aa30.2■■■□□ 2.43
ACTB-203ENST00000417101 AKT1S1Q96B36 256 aa30.2■■■□□ 2.43
ACTB-203ENST00000417101 SGIP1Q9BQI5 828 aa30.19■■■□□ 2.42
ACTB-203ENST00000417101 PPM1GO15355 546 aaPredicted RBP30.18■■■□□ 2.42
ACTB-203ENST00000417101 FHDC1Q9C0D6 1143 aaPredicted RBP30.17■■■□□ 2.42
ACTB-203ENST00000417101 YY1P25490 414 aa30.16■■■□□ 2.42
ACTB-203ENST00000417101 PCDH11XQ9BZA7 1347 aa30.15■■■□□ 2.42
ACTB-203ENST00000417101 PCDH11YQ9BZA8 1340 aa30.15■■■□□ 2.42
ACTB-203ENST00000417101 SYT17Q9BSW7 474 aa30.14■■■□□ 2.42
ACTB-203ENST00000417101 EIF4G2P78344 907 aaKnown RBP eCLIP30.13■■■□□ 2.41
ACTB-203ENST00000417101 ARXQ96QS3 562 aa30.13■■■□□ 2.41
ACTB-203ENST00000417101 TFCP2L1Q9NZI6 479 aa30.13■■■□□ 2.41
ACTB-203ENST00000417101 CCNL1Q9UK58 526 aaPredicted RBP30.13■■■□□ 2.41
ACTB-203ENST00000417101 CCER1Q8TC90 406 aaPredicted RBP30.12■■■□□ 2.41
ACTB-203ENST00000417101 HSPA5P11021 654 aaKnown RBP30.11■■■□□ 2.41
ACTB-203ENST00000417101 PNPLA7Q6ZV29 1317 aa30.11■■■□□ 2.41
ACTB-203ENST00000417101 CYP27B1O15528 508 aa30.1■■■□□ 2.41
ACTB-203ENST00000417101 WASHC2AQ641Q2 1341 aa30.1■■■□□ 2.41
ACTB-203ENST00000417101 LY75O60449 1722 aa30.1■■■□□ 2.41
ACTB-203ENST00000417101 SLC16A10Q8TF71 515 aa30.09■■■□□ 2.41
ACTB-203ENST00000417101 POLKQ9UBT6 870 aa30.08■■■□□ 2.41
ACTB-203ENST00000417101 TNNT2P45379 298 aaPredicted RBP30.06■■■□□ 2.4
ACTB-203ENST00000417101 NCAPD2Q15021 1401 aa30.05■■■□□ 2.4
ACTB-203ENST00000417101 ANKRD26Q9UPS8 1709 aa30.05■■■□□ 2.4
ACTB-203ENST00000417101 UTRNP46939 3433 aa30.05■■■□□ 2.4
ACTB-203ENST00000417101 MPRIPQ6WCQ1 1025 aa30.05■■■□□ 2.4
ACTB-203ENST00000417101 EYA1Q99502 592 aa30.05■■■□□ 2.4
ACTB-203ENST00000417101 QSER1Q2KHR3 1735 aa30.05■■■□□ 2.4
ACTB-203ENST00000417101 MAP2P11137 1827 aaKnown RBP30.03■■■□□ 2.4
ACTB-203ENST00000417101 POLD1P28340 1107 aa30.02■■■□□ 2.4
ACTB-203ENST00000417101 PANK3Q9H999 370 aa30.02■■■□□ 2.4
ACTB-203ENST00000417101 SPG7Q9UQ90 795 aa30.02■■■□□ 2.4
ACTB-203ENST00000417101 TUBGCP6Q96RT7 1819 aa30.01■■■□□ 2.4
ACTB-203ENST00000417101 PALLDQ8WX93 1383 aa30.01■■■□□ 2.39
ACTB-203ENST00000417101 MAP3K5Q99683 1374 aa30.01■■■□□ 2.39
ACTB-203ENST00000417101 PKD1L3Q7Z443 1732 aa30■■■□□ 2.39
ACTB-203ENST00000417101 MSH5O43196 834 aa29.99■■■□□ 2.39
ACTB-203ENST00000417101 EIF4A2Q14240 407 aaKnown RBP29.98■■■□□ 2.39
ACTB-203ENST00000417101 KLHL34Q8N239 644 aa29.98■■■□□ 2.39
ACTB-203ENST00000417101 NKX1-1Q15270 411 aaPredicted RBP29.97■■■□□ 2.39
ACTB-203ENST00000417101 COL23A1Q86Y22 540 aaPredicted RBP29.97■■■□□ 2.39
ACTB-203ENST00000417101 TOGARAM1Q9Y4F4 1720 aa29.96■■■□□ 2.39
ACTB-203ENST00000417101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.96■■■□□ 2.39
ACTB-203ENST00000417101 PIGBQ92521 554 aa29.95■■■□□ 2.39
ACTB-203ENST00000417101 SMARCC1Q92922 1105 aaPredicted RBP29.95■■■□□ 2.39
ACTB-203ENST00000417101 ITGB4P16144 1822 aa29.92■■■□□ 2.38
ACTB-203ENST00000417101 HMGB2P26583 209 aaKnown RBP29.92■■■□□ 2.38
ACTB-203ENST00000417101 COL24A1Q17RW2 1714 aa29.92■■■□□ 2.38
ACTB-203ENST00000417101 C5P01031 1676 aa29.91■■■□□ 2.38
ACTB-203ENST00000417101 IFNL2Q8IZJ0 200 aa29.91■■■□□ 2.38
ACTB-203ENST00000417101 PHKG2P15735 406 aa29.9■■■□□ 2.38
ACTB-203ENST00000417101 MSL1Q68DK7 614 aa29.89■■■□□ 2.38
ACTB-203ENST00000417101 TMOD3Q9NYL9 352 aa29.89■■■□□ 2.38
ACTB-203ENST00000417101 GPR162Q16538 588 aa29.88■■■□□ 2.37
ACTB-203ENST00000417101 MORC1Q86VD1 984 aa29.88■■■□□ 2.37
ACTB-203ENST00000417101 GOLGB1Q14789 3259 aaKnown RBP29.88■■■□□ 2.37
ACTB-203ENST00000417101 FLAD1Q8NFF5 587 aa29.87■■■□□ 2.37
ACTB-203ENST00000417101 IGSF1Q8N6C5 1336 aa29.87■■■□□ 2.37
ACTB-203ENST00000417101 AK7Q96M32 723 aa29.86■■■□□ 2.37
ACTB-203ENST00000417101 TAF1LQ8IZX4 1826 aa29.85■■■□□ 2.37
ACTB-203ENST00000417101 NLGN2Q8NFZ4 835 aa29.85■■■□□ 2.37
ACTB-203ENST00000417101 LOC102724428A0A0B4J2F2 783 aa29.84■■■□□ 2.37
ACTB-203ENST00000417101 SIK1P57059 783 aa29.84■■■□□ 2.37
ACTB-203ENST00000417101 ASAP1Q9ULH1 1129 aa29.84■■■□□ 2.37
ACTB-203ENST00000417101 KNSTRNQ9Y448 316 aa29.84■■■□□ 2.37
ACTB-203ENST00000417101 PELP1Q8IZL8 1130 aaKnown RBP29.83■■■□□ 2.37
ACTB-203ENST00000417101 C4BP0C0L5 1744 aa29.82■■■□□ 2.36
ACTB-203ENST00000417101 PLEKHG2Q9H7P9 1386 aa29.82■■■□□ 2.36
ACTB-203ENST00000417101 AMIGO3Q86WK7 504 aa29.82■■■□□ 2.36
ACTB-203ENST00000417101 PHF14O94880 888 aa29.8■■■□□ 2.36
ACTB-203ENST00000417101 SMIM5Q71RC9 77 aa29.8■■■□□ 2.36
ACTB-203ENST00000417101 ZNF784Q8NCA9 323 aaPredicted RBP29.8■■■□□ 2.36
ACTB-203ENST00000417101 LINC00116Q8NCU8 138 aa29.8■■■□□ 2.36
ACTB-203ENST00000417101 PLEKHO1Q53GL0 409 aaPredicted RBP29.79■■■□□ 2.36
ACTB-203ENST00000417101 ATG3Q9NT62 314 aa29.78■■■□□ 2.36
ACTB-203ENST00000417101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.77■■■□□ 2.36
ACTB-203ENST00000417101 ITPK1Q13572 414 aa29.77■■■□□ 2.36
ACTB-203ENST00000417101 ATP6V1AP38606 617 aa29.76■■■□□ 2.35
ACTB-203ENST00000417101 ZNF530Q6P9A1 599 aaPredicted RBP29.76■■■□□ 2.35
ACTB-203ENST00000417101 AEBP1Q8IUX7 1158 aa29.76■■■□□ 2.35
ACTB-203ENST00000417101 CHD4Q14839 1912 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms