RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 SPON1Q9HCB6 807 aa24.65■■□□□ 1.54
CPNE1-210ENST00000416778 FAM208AQ9UK61 1670 aaKnown RBP24.65■■□□□ 1.54
CPNE1-210ENST00000416778 MEGF6O75095 1541 aa24.65■■□□□ 1.54
CPNE1-210ENST00000416778 TATP17735 454 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-210ENST00000416778 STK32BQ9NY57 414 aa24.64■■□□□ 1.54
CPNE1-210ENST00000416778 SMG6Q86US8 1419 aaKnown RBP24.63■■□□□ 1.53
CPNE1-210ENST00000416778 RGPD2P0DJD1 1756 aa24.62■■□□□ 1.53
CPNE1-210ENST00000416778 LRRC4BQ9NT99 713 aa24.62■■□□□ 1.53
CPNE1-210ENST00000416778 KIF20BQ96Q89 1820 aa24.62■■□□□ 1.53
CPNE1-210ENST00000416778 NHSQ6T4R5 1651 aa24.61■■□□□ 1.53
CPNE1-210ENST00000416778 TNNT2P45379 298 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-210ENST00000416778 SYTL4Q96C24 671 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-210ENST00000416778 EYA1Q99502 592 aa24.6■■□□□ 1.53
CPNE1-210ENST00000416778 KAT6BQ8WYB5 2073 aa24.6■■□□□ 1.53
CPNE1-210ENST00000416778 CYP27B1O15528 508 aa24.56■■□□□ 1.52
CPNE1-210ENST00000416778 SLC27A3Q5K4L6 730 aa24.56■■□□□ 1.52
CPNE1-210ENST00000416778 NSD2O96028 1365 aa24.55■■□□□ 1.52
CPNE1-210ENST00000416778 ZBTB7AO95365 584 aa24.55■■□□□ 1.52
CPNE1-210ENST00000416778 KCNQ4P56696 695 aa24.53■■□□□ 1.52
CPNE1-210ENST00000416778 EIF4A2Q14240 407 aaKnown RBP24.53■■□□□ 1.52
CPNE1-210ENST00000416778 ZNF827Q17R98 1081 aa24.53■■□□□ 1.52
CPNE1-210ENST00000416778 AKT1S1Q96B36 256 aa24.53■■□□□ 1.52
CPNE1-210ENST00000416778 ATF5Q9Y2D1 282 aaPredicted RBP24.53■■□□□ 1.52
CPNE1-210ENST00000416778 BTAF1O14981 1849 aa24.53■■□□□ 1.52
CPNE1-210ENST00000416778 PCDH11XQ9BZA7 1347 aa24.53■■□□□ 1.52
CPNE1-210ENST00000416778 PCDH11YQ9BZA8 1340 aa24.53■■□□□ 1.52
CPNE1-210ENST00000416778 NCAPD2Q15021 1401 aa24.52■■□□□ 1.52
CPNE1-210ENST00000416778 PTGER2P43116 358 aa24.52■■□□□ 1.52
CPNE1-210ENST00000416778 KNSTRNQ9Y448 316 aa24.52■■□□□ 1.52
CPNE1-210ENST00000416778 MAP2P11137 1827 aaKnown RBP24.51■■□□□ 1.51
CPNE1-210ENST00000416778 NKX1-1Q15270 411 aaPredicted RBP24.51■■□□□ 1.51
CPNE1-210ENST00000416778 MORC1Q86VD1 984 aa24.51■■□□□ 1.51
CPNE1-210ENST00000416778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.51■■□□□ 1.511e-6■■□□□ 12.2
CPNE1-210ENST00000416778 PPP1R1BQ9UD71 204 aaPredicted RBP24.51■■□□□ 1.51
CPNE1-210ENST00000416778 KIF7Q2M1P5 1343 aa24.51■■□□□ 1.51
CPNE1-210ENST00000416778 SPG7Q9UQ90 795 aa24.5■■□□□ 1.51
CPNE1-210ENST00000416778 SHANK3Q9BYB0 1731 aa24.49■■□□□ 1.51
CPNE1-210ENST00000416778 AMER1Q5JTC6 1135 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-210ENST00000416778 MTFR1LQ9H019 292 aa24.48■■□□□ 1.51
CPNE1-210ENST00000416778 CASZ1Q86V15 1759 aa24.47■■□□□ 1.51
CPNE1-210ENST00000416778 PER1O15534 1290 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-210ENST00000416778 MPRIPQ6WCQ1 1025 aa24.47■■□□□ 1.51
CPNE1-210ENST00000416778 SGIP1Q9BQI5 828 aa24.46■■□□□ 1.51
CPNE1-210ENST00000416778 ANKRD26Q9UPS8 1709 aa24.45■■□□□ 1.5
CPNE1-210ENST00000416778 CCNL1Q9UK58 526 aaPredicted RBP24.45■■□□□ 1.5
CPNE1-210ENST00000416778 PAPPAQ13219 1627 aa24.43■■□□□ 1.5
CPNE1-210ENST00000416778 PIGBQ92521 554 aa24.43■■□□□ 1.5
CPNE1-210ENST00000416778 TFCP2L1Q9NZI6 479 aa24.43■■□□□ 1.5
CPNE1-210ENST00000416778 IGSF1Q8N6C5 1336 aa24.42■■□□□ 1.5
CPNE1-210ENST00000416778 IFNL2Q8IZJ0 200 aa24.42■■□□□ 1.5
CPNE1-210ENST00000416778 PNPLA7Q6ZV29 1317 aa24.41■■□□□ 1.5
CPNE1-210ENST00000416778 PHKG2P15735 406 aa24.41■■□□□ 1.5
CPNE1-210ENST00000416778 SLC16A10Q8TF71 515 aa24.41■■□□□ 1.5
CPNE1-210ENST00000416778 DOT1LQ8TEK3 1739 aa24.41■■□□□ 1.5
CPNE1-210ENST00000416778 IL13P35225 146 aa24.38■■□□□ 1.49
CPNE1-210ENST00000416778 SMARCC1Q92922 1105 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-210ENST00000416778 PLEKHO1Q53GL0 409 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-210ENST00000416778 ARXQ96QS3 562 aa24.36■■□□□ 1.49
CPNE1-210ENST00000416778 SYT17Q9BSW7 474 aa24.36■■□□□ 1.49
CPNE1-210ENST00000416778 PALLDQ8WX93 1383 aa24.36■■□□□ 1.49
CPNE1-210ENST00000416778 LY75O60449 1722 aa24.35■■□□□ 1.49
CPNE1-210ENST00000416778 HMGB2P26583 209 aaKnown RBP24.35■■□□□ 1.49
CPNE1-210ENST00000416778 MTHFSP49914 203 aa24.35■■□□□ 1.49
CPNE1-210ENST00000416778 COL23A1Q86Y22 540 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-210ENST00000416778 AEBP1Q8IUX7 1158 aa24.35■■□□□ 1.49
CPNE1-210ENST00000416778 FHDC1Q9C0D6 1143 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-210ENST00000416778 PKD1L3Q7Z443 1732 aa24.35■■□□□ 1.49
CPNE1-210ENST00000416778 PLEKHG2Q9H7P9 1386 aa24.34■■□□□ 1.49
CPNE1-210ENST00000416778 TMOD3Q9NYL9 352 aa24.34■■□□□ 1.49
CPNE1-210ENST00000416778 AMOTQ4VCS5 1084 aa24.33■■□□□ 1.49
CPNE1-210ENST00000416778 ASAP1Q9ULH1 1129 aa24.33■■□□□ 1.49
CPNE1-210ENST00000416778 CC2D1BQ5T0F9 858 aaKnown RBP24.32■■□□□ 1.48
CPNE1-210ENST00000416778 SULT6B1Q6IMI4 303 aa24.32■■□□□ 1.48
CPNE1-210ENST00000416778 ERVV-2B6SEH9 535 aa24.31■■□□□ 1.48
CPNE1-210ENST00000416778 ATG3Q9NT62 314 aa24.31■■□□□ 1.48
CPNE1-210ENST00000416778 DCAF8L1A6NGE4 600 aa24.3■■□□□ 1.48
CPNE1-210ENST00000416778 DCAF5Q96JK2 942 aa24.3■■□□□ 1.48
CPNE1-210ENST00000416778 LOC102724428A0A0B4J2F2 783 aa24.29■■□□□ 1.48
CPNE1-210ENST00000416778 HSP90AB1P08238 724 aaKnown RBP24.29■■□□□ 1.48
CPNE1-210ENST00000416778 SIK1P57059 783 aa24.29■■□□□ 1.48
CPNE1-210ENST00000416778 TOGARAM1Q9Y4F4 1720 aa24.28■■□□□ 1.48
CPNE1-210ENST00000416778 ZNF530Q6P9A1 599 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-210ENST00000416778 MSH5O43196 834 aa24.27■■□□□ 1.48
CPNE1-210ENST00000416778 POLD1P28340 1107 aa24.27■■□□□ 1.48
CPNE1-210ENST00000416778 ITGB4P16144 1822 aa24.26■■□□□ 1.47
CPNE1-210ENST00000416778 FLAD1Q8NFF5 587 aa24.26■■□□□ 1.47
CPNE1-210ENST00000416778 KDRP35968 1356 aa24.26■■□□□ 1.47
CPNE1-210ENST00000416778 NPC1L1Q9UHC9 1359 aa24.26■■□□□ 1.47
CPNE1-210ENST00000416778 ITPK1Q13572 414 aa24.25■■□□□ 1.47
CPNE1-210ENST00000416778 AMIGO3Q86WK7 504 aa24.25■■□□□ 1.47
CPNE1-210ENST00000416778 ATP6V1AP38606 617 aa24.24■■□□□ 1.47
CPNE1-210ENST00000416778 LINC00116Q8NCU8 138 aa24.24■■□□□ 1.47
CPNE1-210ENST00000416778 QSER1Q2KHR3 1735 aa24.24■■□□□ 1.47
CPNE1-210ENST00000416778 MAP3K5Q99683 1374 aa24.23■■□□□ 1.47
CPNE1-210ENST00000416778 DIAPH1O60610 1272 aaKnown RBP24.22■■□□□ 1.47
CPNE1-210ENST00000416778 CABP4P57796 275 aa24.22■■□□□ 1.47
CPNE1-210ENST00000416778 C1orf141Q5JVX7 400 aa24.22■■□□□ 1.47
CPNE1-210ENST00000416778 SMIM5Q71RC9 77 aa24.22■■□□□ 1.47
CPNE1-210ENST00000416778 AK7Q96M32 723 aa24.22■■□□□ 1.47
CPNE1-210ENST00000416778 SLC4A9Q96Q91 983 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms