RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 CHD4Q14839 1912 aa13.13□□□□□ -0.31
NIF3L1-206ENST00000416651 SSH2Q76I76 1423 aa13.12□□□□□ -0.31
NIF3L1-206ENST00000416651 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
NIF3L1-206ENST00000416651 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
NIF3L1-206ENST00000416651 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
NIF3L1-206ENST00000416651 PHRF1Q9P1Y6 1649 aaKnown RBP13.1□□□□□ -0.31
NIF3L1-206ENST00000416651 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
NIF3L1-206ENST00000416651 C14orf93Q9H972 538 aaKnown RBP13.09□□□□□ -0.31
NIF3L1-206ENST00000416651 SBF2Q86WG5 1849 aa13.09□□□□□ -0.31
NIF3L1-206ENST00000416651 GPRASP1Q5JY77 1395 aa13.08□□□□□ -0.31
NIF3L1-206ENST00000416651 ANKARQ7Z5J8 1434 aa13.08□□□□□ -0.32
NIF3L1-206ENST00000416651 EVA1CP58658 441 aa13.08□□□□□ -0.32
NIF3L1-206ENST00000416651 EFCAB3Q8N7B9 438 aa13.08□□□□□ -0.32
NIF3L1-206ENST00000416651 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
NIF3L1-206ENST00000416651 TCP11L2Q8N4U5 519 aa13.07□□□□□ -0.32
NIF3L1-206ENST00000416651 NGDNQ8NEJ9 315 aaKnown RBP13.07□□□□□ -0.32
NIF3L1-206ENST00000416651 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
NIF3L1-206ENST00000416651 GIGYF1O75420 1035 aaPredicted RBP13.06□□□□□ -0.32
NIF3L1-206ENST00000416651 POGKQ9P215 609 aa13.06□□□□□ -0.32
NIF3L1-206ENST00000416651 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
NIF3L1-206ENST00000416651 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
NIF3L1-206ENST00000416651 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
NIF3L1-206ENST00000416651 PLSCR1O15162 318 aa13.05□□□□□ -0.32
NIF3L1-206ENST00000416651 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
NIF3L1-206ENST00000416651 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
NIF3L1-206ENST00000416651 DHX57Q6P158 1386 aaKnown RBP13.04□□□□□ -0.32
NIF3L1-206ENST00000416651 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
NIF3L1-206ENST00000416651 VARS2Q5ST30 1063 aaKnown RBP13.03□□□□□ -0.32
NIF3L1-206ENST00000416651 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
NIF3L1-206ENST00000416651 TULP4Q9NRJ4 1543 aa13.03□□□□□ -0.32
NIF3L1-206ENST00000416651 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.32
NIF3L1-206ENST00000416651 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.32
NIF3L1-206ENST00000416651 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.33
NIF3L1-206ENST00000416651 TXNRD1Q16881 649 aa13.02□□□□□ -0.33
NIF3L1-206ENST00000416651 LRRC37A3O60309 1634 aa13.02□□□□□ -0.33
NIF3L1-206ENST00000416651 GPR162Q16538 588 aa13.01□□□□□ -0.33
NIF3L1-206ENST00000416651 RNF166Q96A37 237 aaPredicted RBP13.01□□□□□ -0.33
NIF3L1-206ENST00000416651 ARXQ96QS3 562 aa13.01□□□□□ -0.33
NIF3L1-206ENST00000416651 OVOS2A0A0G2JMS6 1433 aa13.01□□□□□ -0.33
NIF3L1-206ENST00000416651 OVOS2A0A0J9YW53 1432 aa13.01□□□□□ -0.33
NIF3L1-206ENST00000416651 OVOS2Q6IE36 1432 aa13.01□□□□□ -0.33
NIF3L1-206ENST00000416651 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
NIF3L1-206ENST00000416651 COL5A2P05997 1499 aaPredicted RBP13□□□□□ -0.33
NIF3L1-206ENST00000416651 ATP7BP35670 1465 aa13□□□□□ -0.33
NIF3L1-206ENST00000416651 ZBTB7CA1YPR0 619 aa13□□□□□ -0.33
NIF3L1-206ENST00000416651 STK32BQ9NY57 414 aa13□□□□□ -0.33
NIF3L1-206ENST00000416651 TMEM92Q6UXU6 159 aa12.99□□□□□ -0.33
NIF3L1-206ENST00000416651 MICALL2Q8IY33 904 aa12.99□□□□□ -0.33
NIF3L1-206ENST00000416651 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
NIF3L1-206ENST00000416651 MTFR1LQ9H019 292 aa12.99□□□□□ -0.33
NIF3L1-206ENST00000416651 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
NIF3L1-206ENST00000416651 NUDT16Q96DE0 195 aaKnown RBP12.98□□□□□ -0.33
NIF3L1-206ENST00000416651 ZNF827Q17R98 1081 aa12.97□□□□□ -0.33
NIF3L1-206ENST00000416651 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
NIF3L1-206ENST00000416651 ACEP12821 1306 aa12.96□□□□□ -0.33
NIF3L1-206ENST00000416651 DDB1Q16531 1140 aa12.96□□□□□ -0.33
NIF3L1-206ENST00000416651 ZSWIM6Q9HCJ5 1215 aa12.96□□□□□ -0.33
NIF3L1-206ENST00000416651 CPDO75976 1380 aa12.95□□□□□ -0.34
NIF3L1-206ENST00000416651 GOLGB1Q14789 3259 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-206ENST00000416651 USP19O94966 1318 aa12.95□□□□□ -0.34
NIF3L1-206ENST00000416651 RIOK3O14730 519 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-206ENST00000416651 YBX3P16989 372 aaKnown RBP eCLIP12.95□□□□□ -0.344e-6■□□□□ 11.2
NIF3L1-206ENST00000416651 AXIN2Q9Y2T1 843 aa12.95□□□□□ -0.34
NIF3L1-206ENST00000416651 CRB1P82279 1406 aa12.95□□□□□ -0.34
NIF3L1-206ENST00000416651 GCP02774 474 aa12.94□□□□□ -0.34
NIF3L1-206ENST00000416651 ZNF687Q8N1G0 1237 aa12.94□□□□□ -0.34
NIF3L1-206ENST00000416651 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
NIF3L1-206ENST00000416651 ACSBG1Q96GR2 724 aa12.94□□□□□ -0.34
NIF3L1-206ENST00000416651 MPHOSPH9Q99550 1183 aa12.94□□□□□ -0.34
NIF3L1-206ENST00000416651 PAPPAQ13219 1627 aa12.93□□□□□ -0.34
NIF3L1-206ENST00000416651 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
NIF3L1-206ENST00000416651 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
NIF3L1-206ENST00000416651 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
NIF3L1-206ENST00000416651 SOX12O15370 315 aa12.92□□□□□ -0.34
NIF3L1-206ENST00000416651 CDK19Q9BWU1 502 aa12.92□□□□□ -0.34
NIF3L1-206ENST00000416651 LRRC4BQ9NT99 713 aa12.92□□□□□ -0.34
NIF3L1-206ENST00000416651 ATP10DQ9P241 1426 aa12.92□□□□□ -0.34
NIF3L1-206ENST00000416651 WNK3Q9BYP7 1800 aa12.92□□□□□ -0.34
NIF3L1-206ENST00000416651 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
NIF3L1-206ENST00000416651 ZNF526Q8TF50 670 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-206ENST00000416651 COL18A1P39060 1754 aa12.91□□□□□ -0.34
NIF3L1-206ENST00000416651 AKAP12Q02952 1782 aa12.91□□□□□ -0.34
NIF3L1-206ENST00000416651 POLR3AO14802 1390 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-206ENST00000416651 HSPA6P17066 643 aa12.9□□□□□ -0.34
NIF3L1-206ENST00000416651 KCNQ4P56696 695 aa12.9□□□□□ -0.34
NIF3L1-206ENST00000416651 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
NIF3L1-206ENST00000416651 TOPAZ1Q8N9V7 1692 aa12.89□□□□□ -0.35
NIF3L1-206ENST00000416651 ITSN1Q15811 1721 aa12.89□□□□□ -0.35
NIF3L1-206ENST00000416651 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
NIF3L1-206ENST00000416651 EIF3AQ14152 1382 aaKnown RBP12.89□□□□□ -0.35
NIF3L1-206ENST00000416651 RGPD5Q99666 1765 aa12.89□□□□□ -0.35
NIF3L1-206ENST00000416651 ARHGEF28Q8N1W1 1705 aaKnown RBP12.88□□□□□ -0.35
NIF3L1-206ENST00000416651 BCL9O00512 1426 aa12.88□□□□□ -0.35
NIF3L1-206ENST00000416651 C11orf95C9JLR9 678 aaPredicted RBP12.87□□□□□ -0.35
NIF3L1-206ENST00000416651 TUBGCP6Q96RT7 1819 aa12.86□□□□□ -0.35
NIF3L1-206ENST00000416651 PLEKHG3A1L390 1219 aa12.86□□□□□ -0.35
NIF3L1-206ENST00000416651 PNPLA7Q6ZV29 1317 aa12.86□□□□□ -0.35
NIF3L1-206ENST00000416651 AATKQ6ZMQ8 1374 aa12.85□□□□□ -0.35
NIF3L1-206ENST00000416651 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.85□□□□□ -0.35
NIF3L1-206ENST00000416651 ARSIQ5FYB1 569 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms