RNA–Protein interactions for RNA: ENST00000416445.6

CALCOCO2-203, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CALCOCO2, Length 1,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-203ENST00000416445 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
CALCOCO2-203ENST00000416445 DDX54Q8TDD1 881 aaKnown RBP13.4□□□□□ -0.26
CALCOCO2-203ENST00000416445 POLR3GLQ9BT43 218 aa13.4□□□□□ -0.26
CALCOCO2-203ENST00000416445 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
CALCOCO2-203ENST00000416445 RTL1A6NKG5 1358 aa13.39□□□□□ -0.27
CALCOCO2-203ENST00000416445 NSD2O96028 1365 aa13.39□□□□□ -0.27
CALCOCO2-203ENST00000416445 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
CALCOCO2-203ENST00000416445 KCNQ4P56696 695 aa13.39□□□□□ -0.27
CALCOCO2-203ENST00000416445 LRRC4BQ9NT99 713 aa13.39□□□□□ -0.27
CALCOCO2-203ENST00000416445 GOLGB1Q14789 3259 aaKnown RBP13.38□□□□□ -0.27
CALCOCO2-203ENST00000416445 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
CALCOCO2-203ENST00000416445 LY75O60449 1722 aa13.37□□□□□ -0.27
CALCOCO2-203ENST00000416445 INSRP06213 1382 aa13.37□□□□□ -0.27
CALCOCO2-203ENST00000416445 ZNF827Q17R98 1081 aa13.36□□□□□ -0.27
CALCOCO2-203ENST00000416445 CDCA8Q53HL2 280 aa13.36□□□□□ -0.27
CALCOCO2-203ENST00000416445 ITGB4P16144 1822 aa13.36□□□□□ -0.27
CALCOCO2-203ENST00000416445 PKD1L3Q7Z443 1732 aa13.35□□□□□ -0.27
CALCOCO2-203ENST00000416445 ZBTB7AO95365 584 aa13.35□□□□□ -0.27
CALCOCO2-203ENST00000416445 PRIM1P49642 420 aaKnown RBP13.35□□□□□ -0.27
CALCOCO2-203ENST00000416445 FLT4P35916 1363 aa13.35□□□□□ -0.27
CALCOCO2-203ENST00000416445 TNNT2P45379 298 aaPredicted RBP13.34□□□□□ -0.27
CALCOCO2-203ENST00000416445 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
CALCOCO2-203ENST00000416445 ZCRB1Q8TBF4 217 aaKnown RBP13.34□□□□□ -0.27
CALCOCO2-203ENST00000416445 PTGER2P43116 358 aa13.33□□□□□ -0.28
CALCOCO2-203ENST00000416445 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
CALCOCO2-203ENST00000416445 PANK3Q9H999 370 aa13.33□□□□□ -0.28
CALCOCO2-203ENST00000416445 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
CALCOCO2-203ENST00000416445 NCAPD2Q15021 1401 aa13.33□□□□□ -0.28
CALCOCO2-203ENST00000416445 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO2-203ENST00000416445 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO2-203ENST00000416445 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
CALCOCO2-203ENST00000416445 CYP27B1O15528 508 aa13.31□□□□□ -0.28
CALCOCO2-203ENST00000416445 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
CALCOCO2-203ENST00000416445 QSER1Q2KHR3 1735 aa13.31□□□□□ -0.28
CALCOCO2-203ENST00000416445 SMG6Q86US8 1419 aaKnown RBP13.31□□□□□ -0.28
CALCOCO2-203ENST00000416445 EYA1Q99502 592 aa13.3□□□□□ -0.28
CALCOCO2-203ENST00000416445 SPON1Q9HCB6 807 aa13.3□□□□□ -0.28
CALCOCO2-203ENST00000416445 STK32BQ9NY57 414 aa13.3□□□□□ -0.28
CALCOCO2-203ENST00000416445 TAF1LQ8IZX4 1826 aa13.3□□□□□ -0.28
CALCOCO2-203ENST00000416445 KIF24Q5T7B8 1368 aa13.3□□□□□ -0.28
CALCOCO2-203ENST00000416445 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
CALCOCO2-203ENST00000416445 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
CALCOCO2-203ENST00000416445 WASHC2AQ641Q2 1341 aa13.29□□□□□ -0.28
CALCOCO2-203ENST00000416445 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
CALCOCO2-203ENST00000416445 C5P01031 1676 aa13.28□□□□□ -0.28
CALCOCO2-203ENST00000416445 COL24A1Q17RW2 1714 aa13.28□□□□□ -0.28
CALCOCO2-203ENST00000416445 TATP17735 454 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO2-203ENST00000416445 EIF4A2Q14240 407 aaKnown RBP13.28□□□□□ -0.28
CALCOCO2-203ENST00000416445 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
CALCOCO2-203ENST00000416445 KIF7Q2M1P5 1343 aa13.27□□□□□ -0.29
CALCOCO2-203ENST00000416445 PNPLA7Q6ZV29 1317 aa13.26□□□□□ -0.29
CALCOCO2-203ENST00000416445 SMIM5Q71RC9 77 aa13.25□□□□□ -0.29
CALCOCO2-203ENST00000416445 AMIGO3Q86WK7 504 aa13.25□□□□□ -0.29
CALCOCO2-203ENST00000416445 PPP1R1BQ9UD71 204 aaPredicted RBP13.25□□□□□ -0.29
CALCOCO2-203ENST00000416445 PCDH11XQ9BZA7 1347 aa13.25□□□□□ -0.29
CALCOCO2-203ENST00000416445 PCDH11YQ9BZA8 1340 aa13.25□□□□□ -0.29
CALCOCO2-203ENST00000416445 AMER1Q5JTC6 1135 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO2-203ENST00000416445 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
CALCOCO2-203ENST00000416445 AEBP1Q8IUX7 1158 aa13.23□□□□□ -0.29
CALCOCO2-203ENST00000416445 SLC27A3Q5K4L6 730 aa13.22□□□□□ -0.29
CALCOCO2-203ENST00000416445 PIGBQ92521 554 aa13.22□□□□□ -0.29
CALCOCO2-203ENST00000416445 MTFR1LQ9H019 292 aa13.22□□□□□ -0.29
CALCOCO2-203ENST00000416445 CCNL1Q9UK58 526 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO2-203ENST00000416445 UBR3Q6ZT12 1888 aa13.22□□□□□ -0.29
CALCOCO2-203ENST00000416445 PALLDQ8WX93 1383 aa13.22□□□□□ -0.29
CALCOCO2-203ENST00000416445 IGSF1Q8N6C5 1336 aa13.22□□□□□ -0.29
CALCOCO2-203ENST00000416445 FHDC1Q9C0D6 1143 aaPredicted RBP13.22□□□□□ -0.29
CALCOCO2-203ENST00000416445 C4BP0C0L5 1744 aa13.21□□□□□ -0.29
CALCOCO2-203ENST00000416445 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.3
CALCOCO2-203ENST00000416445 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
CALCOCO2-203ENST00000416445 PER1O15534 1290 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-203ENST00000416445 PHKG2P15735 406 aa13.2□□□□□ -0.3
CALCOCO2-203ENST00000416445 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-203ENST00000416445 MORC1Q86VD1 984 aa13.2□□□□□ -0.3
CALCOCO2-203ENST00000416445 COL23A1Q86Y22 540 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO2-203ENST00000416445 SYT17Q9BSW7 474 aa13.2□□□□□ -0.3
CALCOCO2-203ENST00000416445 TFCP2L1Q9NZI6 479 aa13.19□□□□□ -0.3
CALCOCO2-203ENST00000416445 ASAP1Q9ULH1 1129 aa13.19□□□□□ -0.3
CALCOCO2-203ENST00000416445 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
CALCOCO2-203ENST00000416445 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
CALCOCO2-203ENST00000416445 IL13P35225 146 aa13.17□□□□□ -0.3
CALCOCO2-203ENST00000416445 ITPK1Q13572 414 aa13.17□□□□□ -0.3
CALCOCO2-203ENST00000416445 CNGB1Q14028 1251 aaPredicted RBP13.17□□□□□ -0.3
CALCOCO2-203ENST00000416445 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
CALCOCO2-203ENST00000416445 ARXQ96QS3 562 aa13.17□□□□□ -0.3
CALCOCO2-203ENST00000416445 SPG7Q9UQ90 795 aa13.17□□□□□ -0.3
CALCOCO2-203ENST00000416445 KNSTRNQ9Y448 316 aa13.17□□□□□ -0.3
CALCOCO2-203ENST00000416445 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
CALCOCO2-203ENST00000416445 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
CALCOCO2-203ENST00000416445 LINC00116Q8NCU8 138 aa13.16□□□□□ -0.3
CALCOCO2-203ENST00000416445 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
CALCOCO2-203ENST00000416445 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
CALCOCO2-203ENST00000416445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■■■■□ 24.7
CALCOCO2-203ENST00000416445 COL5A3P25940 1745 aaPredicted RBP13.15□□□□□ -0.3
CALCOCO2-203ENST00000416445 IFNL2Q8IZJ0 200 aa13.14□□□□□ -0.31
CALCOCO2-203ENST00000416445 ATG3Q9NT62 314 aa13.14□□□□□ -0.31
CALCOCO2-203ENST00000416445 COL3A1P02461 1466 aaPredicted RBP13.14□□□□□ -0.31
CALCOCO2-203ENST00000416445 MTHFSP49914 203 aa13.13□□□□□ -0.31
CALCOCO2-203ENST00000416445 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
CALCOCO2-203ENST00000416445 TMOD3Q9NYL9 352 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms