RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 CHRNA2Q15822 529 aa23.29■■□□□ 1.32
RTN4R-202ENST00000416372 CCDC136Q96JN2 1154 aa23.29■■□□□ 1.32
RTN4R-202ENST00000416372 BCL2L13Q9BXK5 485 aa23.29■■□□□ 1.32
RTN4R-202ENST00000416372 CAMTA1Q9Y6Y1 1673 aa23.29■■□□□ 1.32
RTN4R-202ENST00000416372 NCAPD2Q15021 1401 aa23.29■■□□□ 1.32
RTN4R-202ENST00000416372 GNAT3A8MTJ3 354 aa23.29■■□□□ 1.32
RTN4R-202ENST00000416372 HAP1P54257 671 aaPredicted RBP23.29■■□□□ 1.32
RTN4R-202ENST00000416372 FBXO41Q8TF61 875 aa23.29■■□□□ 1.32
RTN4R-202ENST00000416372 FRAT1Q92837 279 aaPredicted RBP23.29■■□□□ 1.32
RTN4R-202ENST00000416372 MAP3K5Q99683 1374 aa23.28■■□□□ 1.32
RTN4R-202ENST00000416372 ROBO1Q9Y6N7 1651 aa23.28■■□□□ 1.32
RTN4R-202ENST00000416372 SMC4Q9NTJ3 1288 aa23.27■■□□□ 1.32
RTN4R-202ENST00000416372 CRB1P82279 1406 aa23.27■■□□□ 1.32
RTN4R-202ENST00000416372 CHL1O00533 1208 aa23.25■■□□□ 1.31
RTN4R-202ENST00000416372 CSB-PGBD3P0DP91 1061 aa23.25■■□□□ 1.31
RTN4R-202ENST00000416372 PDE3AQ14432 1141 aa23.25■■□□□ 1.31
RTN4R-202ENST00000416372 PLEKHO1Q53GL0 409 aaPredicted RBP23.25■■□□□ 1.31
RTN4R-202ENST00000416372 NLRP2Q9NX02 1062 aa23.25■■□□□ 1.31
RTN4R-202ENST00000416372 ABCA3Q99758 1704 aa23.25■■□□□ 1.31
RTN4R-202ENST00000416372 CERKQ8TCT0 537 aa23.24■■□□□ 1.31
RTN4R-202ENST00000416372 SSH1Q8WYL5 1049 aa23.24■■□□□ 1.31
RTN4R-202ENST00000416372 LMO7Q8WWI1 1683 aa23.24■■□□□ 1.31
RTN4R-202ENST00000416372 ZNF428Q96B54 188 aa23.24■■□□□ 1.31
RTN4R-202ENST00000416372 PRDM11Q9NQV5 511 aa23.24■■□□□ 1.31
RTN4R-202ENST00000416372 FAM208AQ9UK61 1670 aaKnown RBP23.23■■□□□ 1.31
RTN4R-202ENST00000416372 AMOTQ4VCS5 1084 aa23.23■■□□□ 1.31
RTN4R-202ENST00000416372 ALDH1L2Q3SY69 923 aa23.22■■□□□ 1.31
RTN4R-202ENST00000416372 VAMP4O75379 141 aa23.22■■□□□ 1.31
RTN4R-202ENST00000416372 TSPYL6Q8N831 410 aa23.22■■□□□ 1.31
RTN4R-202ENST00000416372 LRRC37A3O60309 1634 aa23.21■■□□□ 1.31
RTN4R-202ENST00000416372 AHDC1Q5TGY3 1603 aaPredicted RBP23.21■■□□□ 1.31
RTN4R-202ENST00000416372 ELL2O00472 640 aaPredicted RBP23.21■■□□□ 1.31
RTN4R-202ENST00000416372 TWISTNBQ3B726 338 aaPredicted RBP23.21■■□□□ 1.31
RTN4R-202ENST00000416372 ZNF530Q6P9A1 599 aaPredicted RBP23.21■■□□□ 1.31
RTN4R-202ENST00000416372 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
RTN4R-202ENST00000416372 ZKSCAN2Q63HK3 967 aa23.2■■□□□ 1.3
RTN4R-202ENST00000416372 IL17REQ8NFR9 667 aa23.2■■□□□ 1.3
RTN4R-202ENST00000416372 PANK1Q8TE04 598 aa23.19■■□□□ 1.3
RTN4R-202ENST00000416372 RAPGEF4Q8WZA2 1011 aa23.19■■□□□ 1.3
RTN4R-202ENST00000416372 TSPYL4Q9UJ04 414 aa23.19■■□□□ 1.3
RTN4R-202ENST00000416372 AKAP4Q5JQC9 854 aa23.18■■□□□ 1.3
RTN4R-202ENST00000416372 MIS18AQ9NYP9 233 aa23.18■■□□□ 1.3
RTN4R-202ENST00000416372 C1orf141Q5JVX7 400 aa23.17■■□□□ 1.3
RTN4R-202ENST00000416372 KIF16BQ96L93 1317 aa23.17■■□□□ 1.3
RTN4R-202ENST00000416372 MS4A1P11836 297 aa23.17■■□□□ 1.3
RTN4R-202ENST00000416372 TATP17735 454 aaPredicted RBP23.16■■□□□ 1.3
RTN4R-202ENST00000416372 NOB1Q9ULX3 412 aaKnown RBP23.15■■□□□ 1.3
RTN4R-202ENST00000416372 TNNQ9UQP3 1299 aa23.15■■□□□ 1.3
RTN4R-202ENST00000416372 COG6Q9Y2V7 657 aa23.15■■□□□ 1.3
RTN4R-202ENST00000416372 IPO8O15397 1037 aaKnown RBP23.14■■□□□ 1.3
RTN4R-202ENST00000416372 TAF7Q15545 349 aaPredicted RBP23.14■■□□□ 1.3
RTN4R-202ENST00000416372 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.3
RTN4R-202ENST00000416372 TOM1O60784 492 aa23.14■■□□□ 1.29
RTN4R-202ENST00000416372 BRPF1P55201 1214 aaPredicted RBP23.14■■□□□ 1.29
RTN4R-202ENST00000416372 CEMIPQ8WUJ3 1361 aa23.13■■□□□ 1.29
RTN4R-202ENST00000416372 RLBP1P12271 317 aa23.13■■□□□ 1.29
RTN4R-202ENST00000416372 KRT24Q2M2I5 525 aa23.13■■□□□ 1.29
RTN4R-202ENST00000416372 FTSJ3Q8IY81 847 aaKnown RBP23.13■■□□□ 1.29
RTN4R-202ENST00000416372 DZIP1LQ8IYY4 767 aaKnown RBP23.13■■□□□ 1.29
RTN4R-202ENST00000416372 MRPL50Q8N5N7 158 aaKnown RBP23.13■■□□□ 1.29
RTN4R-202ENST00000416372 BABAM1Q9NWV8 329 aa23.13■■□□□ 1.29
RTN4R-202ENST00000416372 WDR17Q8IZU2 1322 aa23.13■■□□□ 1.29
RTN4R-202ENST00000416372 ATF7IPQ6VMQ6 1270 aa23.12■■□□□ 1.29
RTN4R-202ENST00000416372 LGR6Q9HBX8 967 aa23.12■■□□□ 1.29
RTN4R-202ENST00000416372 COL5A2P05997 1499 aaPredicted RBP23.12■■□□□ 1.29
RTN4R-202ENST00000416372 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
RTN4R-202ENST00000416372 PHLPP1O60346 1717 aa23.11■■□□□ 1.29
RTN4R-202ENST00000416372 TRIM27P14373 513 aa23.11■■□□□ 1.29
RTN4R-202ENST00000416372 MPRIPQ6WCQ1 1025 aa23.11■■□□□ 1.29
RTN4R-202ENST00000416372 MEGF6O75095 1541 aa23.1■■□□□ 1.29
RTN4R-202ENST00000416372 COL22A1Q8NFW1 1626 aaPredicted RBP23.1■■□□□ 1.29
RTN4R-202ENST00000416372 TCERG1O14776 1098 aaKnown RBP23.1■■□□□ 1.29
RTN4R-202ENST00000416372 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
RTN4R-202ENST00000416372 PIP4K2BP78356 416 aa23.09■■□□□ 1.29
RTN4R-202ENST00000416372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.09■■□□□ 1.29
RTN4R-202ENST00000416372 PLEKHG2Q9H7P9 1386 aa23.09■■□□□ 1.29
RTN4R-202ENST00000416372 RNMTO43148 476 aaKnown RBP23.09■■□□□ 1.29
RTN4R-202ENST00000416372 EVA1CP58658 441 aa23.09■■□□□ 1.29
RTN4R-202ENST00000416372 TEFQ10587 303 aa23.09■■□□□ 1.29
RTN4R-202ENST00000416372 OVOS2A0A0G2JMS6 1433 aa23.08■■□□□ 1.29
RTN4R-202ENST00000416372 VIRMAQ69YN4 1812 aaKnown RBP23.07■■□□□ 1.28
RTN4R-202ENST00000416372 MVPQ14764 893 aaKnown RBP23.07■■□□□ 1.28
RTN4R-202ENST00000416372 STRN4Q9NRL3 753 aa23.07■■□□□ 1.28
RTN4R-202ENST00000416372 ARHGAP45Q92619 1136 aa23.06■■□□□ 1.28
RTN4R-202ENST00000416372 COL16A1Q07092 1604 aaPredicted RBP23.06■■□□□ 1.28
RTN4R-202ENST00000416372 AAMPQ13685 434 aa23.06■■□□□ 1.28
RTN4R-202ENST00000416372 CARD10Q9BWT7 1032 aa23.05■■□□□ 1.28
RTN4R-202ENST00000416372 UBAP1LF5GYI3 381 aa23.04■■□□□ 1.28
RTN4R-202ENST00000416372 PKD1L3Q7Z443 1732 aa23.04■■□□□ 1.28
RTN4R-202ENST00000416372 COL14A1Q05707 1796 aaKnown RBP23.04■■□□□ 1.28
RTN4R-202ENST00000416372 PARP4Q9UKK3 1724 aaKnown RBP23.03■■□□□ 1.28
RTN4R-202ENST00000416372 PHKG2P15735 406 aa23.03■■□□□ 1.28
RTN4R-202ENST00000416372 LARP1Q6PKG0 1096 aaKnown RBP23.03■■□□□ 1.28
RTN4R-202ENST00000416372 IFNL2Q8IZJ0 200 aa23.03■■□□□ 1.28
RTN4R-202ENST00000416372 ADAMTS7Q9UKP4 1686 aa23.02■■□□□ 1.28
RTN4R-202ENST00000416372 ITPRIPQ8IWB1 547 aa23.02■■□□□ 1.28
RTN4R-202ENST00000416372 BTG4Q9NY30 223 aa23.02■■□□□ 1.28
RTN4R-202ENST00000416372 KDM3BQ7LBC6 1761 aa23.02■■□□□ 1.28
RTN4R-202ENST00000416372 SOS1Q07889 1333 aaPredicted RBP23.02■■□□□ 1.28
RTN4R-202ENST00000416372 BTBD11A6QL63 1104 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms