RNA–Protein interactions for RNA: ENST00000416215.6

PTPN6-203, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 2,412 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-203ENST00000416215 RWDD1Q9H446 243 aaPredicted RBP17.17■□□□□ 0.34
PTPN6-203ENST00000416215 STRCP1A6NGW2 1772 aa17.17■□□□□ 0.34
PTPN6-203ENST00000416215 RTL1A6NKG5 1358 aa17.17■□□□□ 0.34
PTPN6-203ENST00000416215 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
PTPN6-203ENST00000416215 NPM2Q86SE8 214 aaKnown RBP17.16■□□□□ 0.34
PTPN6-203ENST00000416215 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
PTPN6-203ENST00000416215 ZBTB40Q9NUA8 1239 aa17.16■□□□□ 0.34
PTPN6-203ENST00000416215 ATF3P18847 181 aa17.16■□□□□ 0.34
PTPN6-203ENST00000416215 ARHGAP45Q92619 1136 aa17.16■□□□□ 0.34
PTPN6-203ENST00000416215 DDX17Q92841 729 aaKnown RBP17.16■□□□□ 0.34
PTPN6-203ENST00000416215 ANP32AP39687 249 aaKnown RBP17.14■□□□□ 0.33
PTPN6-203ENST00000416215 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
PTPN6-203ENST00000416215 GNAT3A8MTJ3 354 aa17.13■□□□□ 0.33
PTPN6-203ENST00000416215 ARHGEF25Q86VW2 580 aa17.13■□□□□ 0.33
PTPN6-203ENST00000416215 LRRC59Q96AG4 307 aaKnown RBP17.13■□□□□ 0.33
PTPN6-203ENST00000416215 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
PTPN6-203ENST00000416215 C8orf34Q49A92 452 aa17.13■□□□□ 0.33
PTPN6-203ENST00000416215 FAM161AQ3B820 660 aa17.12■□□□□ 0.33
PTPN6-203ENST00000416215 IL17REQ8NFR9 667 aa17.12■□□□□ 0.33
PTPN6-203ENST00000416215 KDM4FA0A1W2PPD8 638 aa17.12■□□□□ 0.33
PTPN6-203ENST00000416215 ZBTB7BO15156 539 aaPredicted RBP17.12■□□□□ 0.33
PTPN6-203ENST00000416215 KIAA0232Q92628 1395 aa17.12■□□□□ 0.33
PTPN6-203ENST00000416215 MST1RQ04912 1400 aa17.11■□□□□ 0.33
PTPN6-203ENST00000416215 TRPM3Q9HCF6 1732 aaPredicted RBP17.11■□□□□ 0.33
PTPN6-203ENST00000416215 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
PTPN6-203ENST00000416215 MSH6P52701 1360 aa17.11■□□□□ 0.33
PTPN6-203ENST00000416215 ABCC4O15439 1325 aa17.11■□□□□ 0.33
PTPN6-203ENST00000416215 HDAC1Q13547 482 aaPredicted RBP17.1■□□□□ 0.33
PTPN6-203ENST00000416215 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
PTPN6-203ENST00000416215 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
PTPN6-203ENST00000416215 USP19O94966 1318 aa17.1■□□□□ 0.33
PTPN6-203ENST00000416215 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
PTPN6-203ENST00000416215 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
PTPN6-203ENST00000416215 SLIT3O75094 1523 aa17.09■□□□□ 0.33
PTPN6-203ENST00000416215 IPO9Q96P70 1041 aaKnown RBP17.09■□□□□ 0.33
PTPN6-203ENST00000416215 KIF1AQ12756 1690 aa17.09■□□□□ 0.33
PTPN6-203ENST00000416215 HAP1P54257 671 aaPredicted RBP17.08■□□□□ 0.33
PTPN6-203ENST00000416215 ZC3H6P61129 1189 aaKnown RBP17.08■□□□□ 0.33
PTPN6-203ENST00000416215 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.33
PTPN6-203ENST00000416215 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
PTPN6-203ENST00000416215 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
PTPN6-203ENST00000416215 ANKRD24Q8TF21 1146 aa17.07■□□□□ 0.32
PTPN6-203ENST00000416215 PHRF1Q9P1Y6 1649 aaKnown RBP17.07■□□□□ 0.32
PTPN6-203ENST00000416215 TAF7Q15545 349 aaPredicted RBP17.06■□□□□ 0.32
PTPN6-203ENST00000416215 DCCP43146 1447 aa17.05■□□□□ 0.32
PTPN6-203ENST00000416215 NCOA3Q9Y6Q9 1424 aa17.05■□□□□ 0.32
PTPN6-203ENST00000416215 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
PTPN6-203ENST00000416215 SMC5Q8IY18 1101 aa17.05■□□□□ 0.32
PTPN6-203ENST00000416215 G2E3Q7L622 706 aa17.04■□□□□ 0.32
PTPN6-203ENST00000416215 CABLES1Q8TDN4 633 aa17.04■□□□□ 0.32
PTPN6-203ENST00000416215 LRRC37A3O60309 1634 aa17.04■□□□□ 0.32
PTPN6-203ENST00000416215 ANP32EQ9BTT0 268 aa17.04■□□□□ 0.32
PTPN6-203ENST00000416215 RGS12O14924 1447 aa17.03■□□□□ 0.32
PTPN6-203ENST00000416215 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
PTPN6-203ENST00000416215 ALS2Q96Q42 1657 aa17.03■□□□□ 0.32
PTPN6-203ENST00000416215 CHMP4BQ9H444 224 aaKnown RBP17.03■□□□□ 0.32
PTPN6-203ENST00000416215 MED1Q15648 1581 aaPredicted RBP17.03■□□□□ 0.32
PTPN6-203ENST00000416215 ERICH6Q7L0X2 663 aa17.02■□□□□ 0.32
PTPN6-203ENST00000416215 NECTIN2Q92692 538 aa17.02■□□□□ 0.32
PTPN6-203ENST00000416215 NOP58Q9Y2X3 529 aaKnown RBP17.02■□□□□ 0.32
PTPN6-203ENST00000416215 RGPD5Q99666 1765 aa17.02■□□□□ 0.32
PTPN6-203ENST00000416215 INTS3Q68E01 1043 aaKnown RBP17.02■□□□□ 0.32
PTPN6-203ENST00000416215 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.32
PTPN6-203ENST00000416215 NPHP3Q7Z494 1330 aa17.01■□□□□ 0.31
PTPN6-203ENST00000416215 PLEKHO1Q53GL0 409 aaPredicted RBP17.01■□□□□ 0.31
PTPN6-203ENST00000416215 ZNF530Q6P9A1 599 aaPredicted RBP17.01■□□□□ 0.31
PTPN6-203ENST00000416215 STRCQ7RTU9 1775 aa17.01■□□□□ 0.31
PTPN6-203ENST00000416215 PTPRCP08575 1304 aa17.01■□□□□ 0.31
PTPN6-203ENST00000416215 MPRIPQ6WCQ1 1025 aa17■□□□□ 0.31
PTPN6-203ENST00000416215 ZBTB47Q9UFB7 747 aaPredicted RBP17■□□□□ 0.31
PTPN6-203ENST00000416215 XIRP1Q702N8 1843 aaKnown RBP17■□□□□ 0.31
PTPN6-203ENST00000416215 CEMIPQ8WUJ3 1361 aa17■□□□□ 0.31
PTPN6-203ENST00000416215 ZNF335Q9H4Z2 1342 aaPredicted RBP17■□□□□ 0.31
PTPN6-203ENST00000416215 SEC24BO95487 1268 aa17■□□□□ 0.31
PTPN6-203ENST00000416215 F6X3S4 739 aa16.99■□□□□ 0.31
PTPN6-203ENST00000416215 AKAP4Q5JQC9 854 aa16.99■□□□□ 0.31
PTPN6-203ENST00000416215 ERBB3P21860 1342 aa16.99■□□□□ 0.31
PTPN6-203ENST00000416215 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
PTPN6-203ENST00000416215 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
PTPN6-203ENST00000416215 STK31Q9BXU1 1019 aa16.98■□□□□ 0.31
PTPN6-203ENST00000416215 NCAPD2Q15021 1401 aa16.98■□□□□ 0.31
PTPN6-203ENST00000416215 NUCB1Q02818 461 aa16.98■□□□□ 0.31
PTPN6-203ENST00000416215 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
PTPN6-203ENST00000416215 AMOTQ4VCS5 1084 aa16.98■□□□□ 0.31
PTPN6-203ENST00000416215 CCDC30Q5VVM6 783 aa16.98■□□□□ 0.31
PTPN6-203ENST00000416215 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
PTPN6-203ENST00000416215 SLC4A10Q6U841 1118 aa16.97■□□□□ 0.31
PTPN6-203ENST00000416215 SPATA31A3Q5VYP0 1347 aa16.97■□□□□ 0.31
PTPN6-203ENST00000416215 KCNQ3O43525 872 aa16.97■□□□□ 0.31
PTPN6-203ENST00000416215 PXDNQ92626 1479 aa16.97■□□□□ 0.31
PTPN6-203ENST00000416215 C1orf141Q5JVX7 400 aa16.96■□□□□ 0.31
PTPN6-203ENST00000416215 NLRP2Q9NX02 1062 aa16.96■□□□□ 0.31
PTPN6-203ENST00000416215 TNS3Q68CZ2 1445 aa16.96■□□□□ 0.31
PTPN6-203ENST00000416215 TEFQ10587 303 aa16.96■□□□□ 0.3
PTPN6-203ENST00000416215 ANKRD45Q5TZF3 282 aa16.96■□□□□ 0.3
PTPN6-203ENST00000416215 CHD1LQ86WJ1 897 aa16.96■□□□□ 0.3
PTPN6-203ENST00000416215 MEIS3Q99687 375 aa16.96■□□□□ 0.3
PTPN6-203ENST00000416215 RNMTO43148 476 aaKnown RBP16.95■□□□□ 0.3
PTPN6-203ENST00000416215 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
PTPN6-203ENST00000416215 EIF4A1P60842 406 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms