RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 KIF7Q2M1P5 1343 aa27.71■■■□□ 2.03
CTTN-205ENST00000415461 ZCRB1Q8TBF4 217 aaKnown RBP27.71■■■□□ 2.03
CTTN-205ENST00000415461 SHANK3Q9BYB0 1731 aa27.7■■■□□ 2.03
CTTN-205ENST00000415461 RAPGEF4Q8WZA2 1011 aa27.7■■■□□ 2.02
CTTN-205ENST00000415461 POLKQ9UBT6 870 aa27.7■■■□□ 2.02
CTTN-205ENST00000415461 TXNRD1Q16881 649 aa27.69■■■□□ 2.02
CTTN-205ENST00000415461 WASHC2AQ641Q2 1341 aa27.68■■■□□ 2.02
CTTN-205ENST00000415461 NSD2O96028 1365 aa27.68■■■□□ 2.02
CTTN-205ENST00000415461 TATP17735 454 aaPredicted RBP27.67■■■□□ 2.02
CTTN-205ENST00000415461 BTAF1O14981 1849 aa27.66■■■□□ 2.02
CTTN-205ENST00000415461 NCAPD2Q15021 1401 aa27.66■■■□□ 2.02
CTTN-205ENST00000415461 DOT1LQ8TEK3 1739 aa27.64■■■□□ 2.01
CTTN-205ENST00000415461 SYTL4Q96C24 671 aaPredicted RBP27.63■■■□□ 2.01
CTTN-205ENST00000415461 MAP2P11137 1827 aaKnown RBP27.62■■■□□ 2.01
CTTN-205ENST00000415461 PRIM1P49642 420 aaKnown RBP27.61■■■□□ 2.01
CTTN-205ENST00000415461 KNSTRNQ9Y448 316 aa27.61■■■□□ 2.01
CTTN-205ENST00000415461 PCDH11XQ9BZA7 1347 aa27.61■■■□□ 2.01
CTTN-205ENST00000415461 PCDH11YQ9BZA8 1340 aa27.61■■■□□ 2.01
CTTN-205ENST00000415461 EYA1Q99502 592 aa27.6■■■□□ 2.01
CTTN-205ENST00000415461 EIF4A2Q14240 407 aaKnown RBP27.59■■■□□ 2.01
CTTN-205ENST00000415461 MORC1Q86VD1 984 aa27.59■■■□□ 2.01
CTTN-205ENST00000415461 STK32BQ9NY57 414 aa27.59■■■□□ 2.01
CTTN-205ENST00000415461 PAPPAQ13219 1627 aa27.58■■■□□ 2.01
CTTN-205ENST00000415461 PDGFDQ9GZP0 370 aaPredicted RBP27.57■■■□□ 2
CTTN-205ENST00000415461 SLC15A2Q16348 729 aa27.56■■■□□ 2
CTTN-205ENST00000415461 AMER1Q5JTC6 1135 aaPredicted RBP27.56■■■□□ 2
CTTN-205ENST00000415461 CASZ1Q86V15 1759 aa27.55■■■□□ 2
CTTN-205ENST00000415461 CYP27B1O15528 508 aa27.55■■■□□ 2
CTTN-205ENST00000415461 LRRC4BQ9NT99 713 aa27.55■■■□□ 2
CTTN-205ENST00000415461 PKD1L3Q7Z443 1732 aa27.55■■■□□ 2
CTTN-205ENST00000415461 KAT6BQ8WYB5 2073 aa27.54■■■□□ 2
CTTN-205ENST00000415461 SPON1Q9HCB6 807 aa27.52■■■□□ 2
CTTN-205ENST00000415461 IGSF1Q8N6C5 1336 aa27.5■■□□□ 1.99
CTTN-205ENST00000415461 ZNF827Q17R98 1081 aa27.5■■□□□ 1.99
CTTN-205ENST00000415461 KCNQ4P56696 695 aa27.49■■□□□ 1.99
CTTN-205ENST00000415461 SLC27A3Q5K4L6 730 aa27.49■■□□□ 1.99
CTTN-205ENST00000415461 SPG7Q9UQ90 795 aa27.49■■□□□ 1.99
CTTN-205ENST00000415461 TOGARAM1Q9Y4F4 1720 aa27.48■■□□□ 1.99
CTTN-205ENST00000415461 PER1O15534 1290 aaPredicted RBP27.48■■□□□ 1.99
CTTN-205ENST00000415461 ZBTB7AO95365 584 aa27.48■■□□□ 1.99
CTTN-205ENST00000415461 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.45■■□□□ 1.982e-14■□□□□ 10.7
CTTN-205ENST00000415461 LY75O60449 1722 aa27.44■■□□□ 1.98
CTTN-205ENST00000415461 CC2D1BQ5T0F9 858 aaKnown RBP27.44■■□□□ 1.98
CTTN-205ENST00000415461 MPRIPQ6WCQ1 1025 aa27.44■■□□□ 1.98
CTTN-205ENST00000415461 NKX1-1Q15270 411 aaPredicted RBP27.43■■□□□ 1.98
CTTN-205ENST00000415461 AKT1S1Q96B36 256 aa27.43■■□□□ 1.98
CTTN-205ENST00000415461 PPP1R1BQ9UD71 204 aaPredicted RBP27.43■■□□□ 1.98
CTTN-205ENST00000415461 CCNL1Q9UK58 526 aaPredicted RBP27.43■■□□□ 1.98
CTTN-205ENST00000415461 AEBP1Q8IUX7 1158 aa27.42■■□□□ 1.98
CTTN-205ENST00000415461 PLEKHG2Q9H7P9 1386 aa27.41■■□□□ 1.98
CTTN-205ENST00000415461 PHKG2P15735 406 aa27.41■■□□□ 1.98
CTTN-205ENST00000415461 PALLDQ8WX93 1383 aa27.4■■□□□ 1.98
CTTN-205ENST00000415461 ATF5Q9Y2D1 282 aaPredicted RBP27.4■■□□□ 1.98
CTTN-205ENST00000415461 IL13P35225 146 aa27.39■■□□□ 1.98
CTTN-205ENST00000415461 PTGER2P43116 358 aa27.39■■□□□ 1.98
CTTN-205ENST00000415461 IFNL2Q8IZJ0 200 aa27.39■■□□□ 1.98
CTTN-205ENST00000415461 PIGBQ92521 554 aa27.38■■□□□ 1.97
CTTN-205ENST00000415461 MTFR1LQ9H019 292 aa27.38■■□□□ 1.97
CTTN-205ENST00000415461 MTHFSP49914 203 aa27.37■■□□□ 1.97
CTTN-205ENST00000415461 CNGB1Q14028 1251 aaPredicted RBP27.37■■□□□ 1.97
CTTN-205ENST00000415461 TFCP2L1Q9NZI6 479 aa27.36■■□□□ 1.97
CTTN-205ENST00000415461 PNPLA7Q6ZV29 1317 aa27.36■■□□□ 1.97
CTTN-205ENST00000415461 NPC1L1Q9UHC9 1359 aa27.35■■□□□ 1.97
CTTN-205ENST00000415461 ITGB4P16144 1822 aa27.35■■□□□ 1.97
CTTN-205ENST00000415461 SULT6B1Q6IMI4 303 aa27.35■■□□□ 1.97
CTTN-205ENST00000415461 KDRP35968 1356 aa27.34■■□□□ 1.97
CTTN-205ENST00000415461 PLEKHO1Q53GL0 409 aaPredicted RBP27.33■■□□□ 1.97
CTTN-205ENST00000415461 TMOD3Q9NYL9 352 aa27.33■■□□□ 1.97
CTTN-205ENST00000415461 TUBGCP6Q96RT7 1819 aa27.32■■□□□ 1.96
CTTN-205ENST00000415461 ZNF530Q6P9A1 599 aaPredicted RBP27.32■■□□□ 1.96
CTTN-205ENST00000415461 SMARCC1Q92922 1105 aaPredicted RBP27.32■■□□□ 1.96
CTTN-205ENST00000415461 QSER1Q2KHR3 1735 aa27.31■■□□□ 1.96
CTTN-205ENST00000415461 SGIP1Q9BQI5 828 aa27.31■■□□□ 1.96
CTTN-205ENST00000415461 AMOTQ4VCS5 1084 aa27.3■■□□□ 1.96
CTTN-205ENST00000415461 KDM6AO15550 1401 aaPredicted RBP27.3■■□□□ 1.96
CTTN-205ENST00000415461 C5P01031 1676 aa27.3■■□□□ 1.96
CTTN-205ENST00000415461 ASAP1Q9ULH1 1129 aa27.28■■□□□ 1.96
CTTN-205ENST00000415461 DCAF5Q96JK2 942 aa27.27■■□□□ 1.96
CTTN-205ENST00000415461 HSP90AB1P08238 724 aaKnown RBP27.26■■□□□ 1.95
CTTN-205ENST00000415461 COL3A1P02461 1466 aaPredicted RBP27.25■■□□□ 1.95
CTTN-205ENST00000415461 DIAPH1O60610 1272 aaKnown RBP27.25■■□□□ 1.95
CTTN-205ENST00000415461 HMOX1P09601 288 aa27.25■■□□□ 1.95
CTTN-205ENST00000415461 SLC16A10Q8TF71 515 aa27.25■■□□□ 1.95
CTTN-205ENST00000415461 LOC102724428A0A0B4J2F2 783 aa27.24■■□□□ 1.95
CTTN-205ENST00000415461 ERVV-2B6SEH9 535 aa27.24■■□□□ 1.95
CTTN-205ENST00000415461 SIK1P57059 783 aa27.24■■□□□ 1.95
CTTN-205ENST00000415461 C1orf141Q5JVX7 400 aa27.24■■□□□ 1.95
CTTN-205ENST00000415461 ATG3Q9NT62 314 aa27.24■■□□□ 1.95
CTTN-205ENST00000415461 FHDC1Q9C0D6 1143 aaPredicted RBP27.23■■□□□ 1.95
CTTN-205ENST00000415461 C4BP0C0L5 1744 aa27.23■■□□□ 1.95
CTTN-205ENST00000415461 COL23A1Q86Y22 540 aaPredicted RBP27.22■■□□□ 1.95
CTTN-205ENST00000415461 ARXQ96QS3 562 aa27.22■■□□□ 1.95
CTTN-205ENST00000415461 TAF1LQ8IZX4 1826 aa27.22■■□□□ 1.95
CTTN-205ENST00000415461 MSH5O43196 834 aa27.21■■□□□ 1.95
CTTN-205ENST00000415461 LINC00116Q8NCU8 138 aa27.21■■□□□ 1.95
CTTN-205ENST00000415461 AK7Q96M32 723 aa27.2■■□□□ 1.94
CTTN-205ENST00000415461 ITPK1Q13572 414 aa27.19■■□□□ 1.94
CTTN-205ENST00000415461 AMIGO3Q86WK7 504 aa27.19■■□□□ 1.94
CTTN-205ENST00000415461 HMGB2P26583 209 aaKnown RBP27.18■■□□□ 1.94
CTTN-205ENST00000415461 CABP4P57796 275 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms