RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 SCTRP47872 440 aa9.24□□□□□ -0.93
PTPRK-209ENST00000415046 RNF144AP50876 292 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-209ENST00000415046 LYSMD3Q7Z3D4 306 aa9.24□□□□□ -0.93
PTPRK-209ENST00000415046 GPR161Q8N6U8 529 aaKnown RBP9.24□□□□□ -0.93
PTPRK-209ENST00000415046 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
PTPRK-209ENST00000415046 CYP2U1Q7Z449 544 aa9.23□□□□□ -0.93
PTPRK-209ENST00000415046 PRM3Q9NNZ6 103 aa9.23□□□□□ -0.93
PTPRK-209ENST00000415046 TRAK2O60296 914 aa9.22□□□□□ -0.93
PTPRK-209ENST00000415046 GPC1P35052 558 aa9.22□□□□□ -0.93
PTPRK-209ENST00000415046 KRT76Q01546 638 aa9.22□□□□□ -0.93
PTPRK-209ENST00000415046 IRF5Q13568 498 aa9.22□□□□□ -0.93
PTPRK-209ENST00000415046 CCDC180Q9P1Z9 1646 aa9.22□□□□□ -0.93
PTPRK-209ENST00000415046 A0A1W2PRU2 124 aa9.21□□□□□ -0.94
PTPRK-209ENST00000415046 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.94
PTPRK-209ENST00000415046 CEP126Q9P2H0 1117 aa9.21□□□□□ -0.94
PTPRK-209ENST00000415046 MEN1O00255 615 aa9.2□□□□□ -0.94
PTPRK-209ENST00000415046 CLN3Q13286 438 aa9.2□□□□□ -0.94
PTPRK-209ENST00000415046 EIF4G2P78344 907 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTPRK-209ENST00000415046 PRICKLE2Q7Z3G6 844 aa9.19□□□□□ -0.94
PTPRK-209ENST00000415046 CCDC85AQ96PX6 553 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-209ENST00000415046 COL25A1Q9BXS0 654 aaPredicted RBP9.19□□□□□ -0.94
PTPRK-209ENST00000415046 CDC14CA4D256 554 aa9.18□□□□□ -0.94
PTPRK-209ENST00000415046 MCM6Q14566 821 aa9.18□□□□□ -0.94
PTPRK-209ENST00000415046 SV2AQ7L0J3 742 aa9.18□□□□□ -0.94
PTPRK-209ENST00000415046 VWA5B2Q8N398 1253 aa9.18□□□□□ -0.94
PTPRK-209ENST00000415046 CNTNAP3BQ96NU0 1288 aa9.18□□□□□ -0.94
PTPRK-209ENST00000415046 CNTNAP3Q9BZ76 1288 aa9.18□□□□□ -0.94
PTPRK-209ENST00000415046 RHOQP17081 205 aa9.17□□□□□ -0.94
PTPRK-209ENST00000415046 ARHGEF10LQ9HCE6 1279 aa9.17□□□□□ -0.94
PTPRK-209ENST00000415046 RNFT1Q5M7Z0 435 aa9.16□□□□□ -0.94
PTPRK-209ENST00000415046 PHTF2Q8N3S3 785 aa9.16□□□□□ -0.94
PTPRK-209ENST00000415046 NLRP3Q96P20 1036 aa9.16□□□□□ -0.94
PTPRK-209ENST00000415046 CDCA7Q9BWT1 371 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-209ENST00000415046 GRIP2Q9C0E4 1043 aa9.16□□□□□ -0.94
PTPRK-209ENST00000415046 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
PTPRK-209ENST00000415046 GDPD2Q9HCC8 539 aa9.16□□□□□ -0.94
PTPRK-209ENST00000415046 CUEDC1Q9NWM3 386 aaPredicted RBP9.16□□□□□ -0.94
PTPRK-209ENST00000415046 MYCP01106 439 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-209ENST00000415046 GNRH1P01148 92 aa9.15□□□□□ -0.94
PTPRK-209ENST00000415046 SPATA31C2B4DYI2 1134 aa9.14□□□□□ -0.95
PTPRK-209ENST00000415046 ABL2P42684 1182 aa9.14□□□□□ -0.95
PTPRK-209ENST00000415046 VAC14Q08AM6 782 aa9.14□□□□□ -0.95
PTPRK-209ENST00000415046 SLC27A3Q5K4L6 730 aa9.14□□□□□ -0.95
PTPRK-209ENST00000415046 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
PTPRK-209ENST00000415046 CHIC2Q9UKJ5 165 aa9.13□□□□□ -0.95
PTPRK-209ENST00000415046 DOLKQ9UPQ8 538 aa9.13□□□□□ -0.95
PTPRK-209ENST00000415046 DYRK1BQ9Y463 629 aa9.13□□□□□ -0.95
PTPRK-209ENST00000415046 IL2RAP01589 272 aa9.12□□□□□ -0.95
PTPRK-209ENST00000415046 POU4F2Q12837 409 aa9.12□□□□□ -0.95
PTPRK-209ENST00000415046 WASHC4Q2M389 1173 aa9.12□□□□□ -0.95
PTPRK-209ENST00000415046 SLFNL1Q499Z3 407 aa9.12□□□□□ -0.95
PTPRK-209ENST00000415046 WDR44Q5JSH3 913 aa9.12□□□□□ -0.95
PTPRK-209ENST00000415046 NBPF10Q6P3W6 841 aaKnown RBP9.12□□□□□ -0.95
PTPRK-209ENST00000415046 NBPF15Q8N660 670 aa9.12□□□□□ -0.95
PTPRK-209ENST00000415046 ZNF837Q96EG3 531 aaPredicted RBP9.12□□□□□ -0.95
PTPRK-209ENST00000415046 GMCL1Q96IK5 515 aa9.12□□□□□ -0.95
PTPRK-209ENST00000415046 ESYT1Q9BSJ8 1104 aa9.12□□□□□ -0.95
PTPRK-209ENST00000415046 SLURP2P0DP57 97 aa9.11□□□□□ -0.95
PTPRK-209ENST00000415046 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
PTPRK-209ENST00000415046 RNF135Q8IUD6 432 aa9.11□□□□□ -0.95
PTPRK-209ENST00000415046 TRIM22Q8IYM9 498 aa9.11□□□□□ -0.95
PTPRK-209ENST00000415046 CNKSR1Q969H4 720 aa9.11□□□□□ -0.95
PTPRK-209ENST00000415046 HRH3Q9Y5N1 445 aa9.11□□□□□ -0.95
PTPRK-209ENST00000415046 WASLO00401 505 aaPredicted RBP9.09□□□□□ -0.95
PTPRK-209ENST00000415046 SOX11P35716 441 aa9.09□□□□□ -0.95
PTPRK-209ENST00000415046 USP4Q13107 963 aa9.09□□□□□ -0.95
PTPRK-209ENST00000415046 GAS6Q14393 721 aa9.09□□□□□ -0.95
PTPRK-209ENST00000415046 TAS1R3Q7RTX0 852 aa9.09□□□□□ -0.95
PTPRK-209ENST00000415046 CENPCQ03188 943 aa9.08□□□□□ -0.96
PTPRK-209ENST00000415046 ZNF385CQ66K41 422 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-209ENST00000415046 XAGE2Q96GT9 111 aa9.08□□□□□ -0.96
PTPRK-209ENST00000415046 FHDC1Q9C0D6 1143 aaPredicted RBP9.08□□□□□ -0.96
PTPRK-209ENST00000415046 COG6Q9Y2V7 657 aa9.08□□□□□ -0.96
PTPRK-209ENST00000415046 H7C1W4 665 aa9.07□□□□□ -0.96
PTPRK-209ENST00000415046 DBN1Q16643 649 aa9.07□□□□□ -0.96
PTPRK-209ENST00000415046 OXLD1Q5BKU9 147 aa9.07□□□□□ -0.96
PTPRK-209ENST00000415046 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
PTPRK-209ENST00000415046 RIPOR1Q6ZS17 1223 aa9.07□□□□□ -0.96
PTPRK-209ENST00000415046 TIMMDC1Q9NPL8 285 aa9.07□□□□□ -0.96
PTPRK-209ENST00000415046 SRSF11Q05519 484 aaKnown RBP9.06□□□□□ -0.96
PTPRK-209ENST00000415046 SVOPQ8N4V2 548 aa9.06□□□□□ -0.96
PTPRK-209ENST00000415046 SIRT1Q96EB6 747 aa9.06□□□□□ -0.96
PTPRK-209ENST00000415046 GAS2L1Q99501 681 aaPredicted RBP9.06□□□□□ -0.96
PTPRK-209ENST00000415046 ETNK1Q9HBU6 452 aa9.06□□□□□ -0.96
PTPRK-209ENST00000415046 ADAMTS2O95450 1211 aa9.05□□□□□ -0.96
PTPRK-209ENST00000415046 SEMA3FQ13275 785 aa9.05□□□□□ -0.96
PTPRK-209ENST00000415046 MAP7D1Q3KQU3 841 aa9.05□□□□□ -0.96
PTPRK-209ENST00000415046 WHAMMQ8TF30 809 aa9.05□□□□□ -0.96
PTPRK-209ENST00000415046 ZSCAN10Q96SZ4 725 aaPredicted RBP9.05□□□□□ -0.96
PTPRK-209ENST00000415046 F11P03951 625 aa9.04□□□□□ -0.96
PTPRK-209ENST00000415046 FOXR1Q6PIV2 292 aa9.04□□□□□ -0.96
PTPRK-209ENST00000415046 PLPP7Q8NBV4 271 aa9.04□□□□□ -0.96
PTPRK-209ENST00000415046 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
PTPRK-209ENST00000415046 GPR25O00155 361 aa9.03□□□□□ -0.96
PTPRK-209ENST00000415046 ARHGEF15O94989 841 aa9.03□□□□□ -0.96
PTPRK-209ENST00000415046 STAU1O95793 577 aaKnown RBP9.03□□□□□ -0.96
PTPRK-209ENST00000415046 GTPBP3Q969Y2 492 aaKnown RBP9.03□□□□□ -0.96
PTPRK-209ENST00000415046 ADAMTS8Q9UP79 889 aa9.03□□□□□ -0.96
PTPRK-209ENST00000415046 A0A1B0GTH6 734 aa9.02□□□□□ -0.97
PTPRK-209ENST00000415046 SCNN1DP51172 638 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms