RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GAS2L2Q8NHY3 880 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 TBC1D2Q9BYX2 928 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 EHBP1L1Q8N3D4 1523 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 ARHGEF12Q9NZN5 1544 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 MTUS2Q5JR59 1369 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 JAKMIP3Q5VZ66 844 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 PCDHGA4Q9Y5G9 962 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 ANKRD30BQ9BXX2 1392 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 E2F4Q16254 413 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 ERBB3P21860 1342 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 SNAPC4Q5SXM2 1469 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 AMOTQ4VCS5 1084 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 MFSD4BQ5TF39 518 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 KCTD17Q8N5Z5 321 aa6.29□□□□□ -1.4
HERC4-205ENST00000412272 PRPF38AQ8NAV1 312 aaKnown RBP6.29□□□□□ -1.4
HERC4-205ENST00000412272 MAP2K2P36507 400 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 SYCP1Q15431 976 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 APBB1IPQ7Z5R6 666 aaPredicted RBP6.28□□□□□ -1.4
HERC4-205ENST00000412272 KDM6BO15054 1643 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 KINO60870 393 aaKnown RBP6.28□□□□□ -1.4
HERC4-205ENST00000412272 ADCY2Q08462 1091 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 GPT2Q8TD30 523 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 ZNF396Q96N95 335 aaPredicted RBP6.28□□□□□ -1.4
HERC4-205ENST00000412272 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.28□□□□□ -1.4
HERC4-205ENST00000412272 IL16Q14005 1332 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 A0A1B0GUL7 405 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 CAPN15O75808 1086 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 NEFHP12036 1026 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 TBC1D25Q3MII6 688 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 NAIF1Q69YI7 327 aaPredicted RBP6.28□□□□□ -1.4
HERC4-205ENST00000412272 KIF18AQ8NI77 898 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 SUN2Q9UH99 717 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 ANKRD30AQ9BXX3 1397 aa6.28□□□□□ -1.4
HERC4-205ENST00000412272 MAGEA8P43361 318 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 PIAS4Q8N2W9 510 aaPredicted RBP6.27□□□□□ -1.41
HERC4-205ENST00000412272 SNX21Q969T3 373 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 THOC1Q96FV9 657 aaKnown RBP6.27□□□□□ -1.41
HERC4-205ENST00000412272 DEF6Q9H4E7 631 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 PPFIA2O75334 1257 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 MCTP2Q6DN12 878 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 NLRP13Q86W25 1043 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 KRT222Q8N1A0 295 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 IRX1P78414 480 aaPredicted RBP6.27□□□□□ -1.41
HERC4-205ENST00000412272 NEXNQ0ZGT2 675 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 SMC5Q8IY18 1101 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 ANKRD20A12PQ8NF67 263 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 FHOD3Q2V2M9 1422 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 ZNF521Q96K83 1311 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 PLEKHG2Q9H7P9 1386 aa6.27□□□□□ -1.41
HERC4-205ENST00000412272 GOLGA6L6A8MZA4 724 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 CEP89Q96ST8 783 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 CEP170Q5SW79 1584 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 OATP04181 439 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 MYBL2P10244 700 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 NCBP1Q09161 790 aaKnown RBP6.26□□□□□ -1.41
HERC4-205ENST00000412272 CEP126Q9P2H0 1117 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 REREQ9P2R6 1566 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 KIAA2012Q0VF49 1180 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 RAB3GAP1Q15042 981 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 DZIP3Q86Y13 1208 aaKnown RBP6.26□□□□□ -1.41
HERC4-205ENST00000412272 MMTAG2Q9BU76 263 aaKnown RBP6.26□□□□□ -1.41
HERC4-205ENST00000412272 RMI1Q9H9A7 625 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 CGNL1Q0VF96 1302 aa6.26□□□□□ -1.41
HERC4-205ENST00000412272 TTC31Q49AM3 519 aaPredicted RBP6.26□□□□□ -1.41
HERC4-205ENST00000412272 SCAF11Q99590 1463 aaKnown RBP6.26□□□□□ -1.41
HERC4-205ENST00000412272 ROCK1Q13464 1354 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 TBC1D8BQ0IIM8 1120 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 RASA3Q14644 834 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 BMS1Q14692 1282 aaKnown RBP6.25□□□□□ -1.41
HERC4-205ENST00000412272 SRLQ86TD4 932 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 CCDC125Q86Z20 511 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 TRMT2AQ8IZ69 625 aaKnown RBP6.25□□□□□ -1.41
HERC4-205ENST00000412272 HELBQ8NG08 1087 aaPredicted RBP6.25□□□□□ -1.41
HERC4-205ENST00000412272 EPB41L2O43491 1005 aaKnown RBP6.25□□□□□ -1.41
HERC4-205ENST00000412272 C20orf194Q5TEA3 1177 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 CCDC26Q8TAB7 109 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 CCDC39Q9UFE4 941 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 RPGRIP1LQ68CZ1 1315 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 C21orf2O43822 256 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 ALDH1B1P30837 517 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 FKBP5Q13451 457 aaPredicted RBP6.25□□□□□ -1.41
HERC4-205ENST00000412272 KLHL40Q2TBA0 621 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 TSPYL2Q9H2G4 693 aaPredicted RBP6.25□□□□□ -1.41
HERC4-205ENST00000412272 BLOC1S6Q9UL45 172 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 SYNMO15061 1565 aa6.25□□□□□ -1.41
HERC4-205ENST00000412272 ZKSCAN2Q63HK3 967 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 KCNV1Q6PIU1 500 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 GBP4Q96PP9 640 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 LZTS2Q9BRK4 669 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 ST7Q9NRC1 585 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 TBC1D2BQ9UPU7 963 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 KRBA2Q6ZNG9 492 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.24□□□□□ -1.41
HERC4-205ENST00000412272 ZCRB1Q8TBF4 217 aaKnown RBP6.24□□□□□ -1.41
HERC4-205ENST00000412272 KIF1BPQ96EK5 621 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 ITSN2Q9NZM3 1697 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 RBM47A0AV96 593 aaKnown RBP6.24□□□□□ -1.41
HERC4-205ENST00000412272 CDC37Q16543 378 aaPredicted RBP6.24□□□□□ -1.41
HERC4-205ENST00000412272 NCAPG2Q86XI2 1143 aa6.24□□□□□ -1.41
HERC4-205ENST00000412272 GOLGA6L1Q8N7Z2 621 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms