RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 KLHL34Q8N239 644 aa8.68□□□□□ -1.02
HMGN1P20-201ENST00000411849 ZNF692Q9BU19 519 aaPredicted RBP8.68□□□□□ -1.02
HMGN1P20-201ENST00000411849 EVC2Q86UK5 1308 aa8.68□□□□□ -1.02
HMGN1P20-201ENST00000411849 TTC21AQ8NDW8 1320 aa8.68□□□□□ -1.02
HMGN1P20-201ENST00000411849 SOX12O15370 315 aa8.67□□□□□ -1.02
HMGN1P20-201ENST00000411849 NBPF1Q3BBV0 1214 aa8.67□□□□□ -1.02
HMGN1P20-201ENST00000411849 TTC21BQ7Z4L5 1316 aa8.67□□□□□ -1.02
HMGN1P20-201ENST00000411849 PELP1Q8IZL8 1130 aaKnown RBP8.67□□□□□ -1.02
HMGN1P20-201ENST00000411849 ACSBG1Q96GR2 724 aa8.67□□□□□ -1.02
HMGN1P20-201ENST00000411849 GRIN3BO60391 1043 aa8.66□□□□□ -1.02
HMGN1P20-201ENST00000411849 IL2RBP14784 551 aa8.66□□□□□ -1.02
HMGN1P20-201ENST00000411849 ZNF827Q17R98 1081 aa8.66□□□□□ -1.02
HMGN1P20-201ENST00000411849 SLC27A3Q5K4L6 730 aa8.66□□□□□ -1.02
HMGN1P20-201ENST00000411849 NLRP2Q9NX02 1062 aa8.66□□□□□ -1.02
HMGN1P20-201ENST00000411849 C5P01031 1676 aa8.65□□□□□ -1.02
HMGN1P20-201ENST00000411849 KTN1Q86UP2 1357 aaKnown RBP8.65□□□□□ -1.02
HMGN1P20-201ENST00000411849 ERBB3P21860 1342 aa8.65□□□□□ -1.02
HMGN1P20-201ENST00000411849 SPDYE2BA6NHP3 402 aa8.65□□□□□ -1.02
HMGN1P20-201ENST00000411849 SPDYE6P0CI01 402 aa8.65□□□□□ -1.02
HMGN1P20-201ENST00000411849 SPDYE2Q495Y8 402 aa8.65□□□□□ -1.02
HMGN1P20-201ENST00000411849 TAF1LQ8IZX4 1826 aa8.64□□□□□ -1.03
HMGN1P20-201ENST00000411849 LRRC4BQ9NT99 713 aa8.64□□□□□ -1.03
HMGN1P20-201ENST00000411849 TFCP2L1Q9NZI6 479 aa8.64□□□□□ -1.03
HMGN1P20-201ENST00000411849 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
HMGN1P20-201ENST00000411849 PNPLA7Q6ZV29 1317 aa8.63□□□□□ -1.03
HMGN1P20-201ENST00000411849 HAX1O00165 279 aa8.63□□□□□ -1.03
HMGN1P20-201ENST00000411849 ATP10DQ9P241 1426 aa8.63□□□□□ -1.03
HMGN1P20-201ENST00000411849 NLGN2Q8NFZ4 835 aa8.62□□□□□ -1.03
HMGN1P20-201ENST00000411849 SSUH2Q9Y2M2 353 aa8.62□□□□□ -1.03
HMGN1P20-201ENST00000411849 USP31Q70CQ4 1352 aa8.61□□□□□ -1.03
HMGN1P20-201ENST00000411849 YBX3P16989 372 aaKnown RBP eCLIP8.61□□□□□ -1.03
HMGN1P20-201ENST00000411849 HMGB2P26583 209 aaKnown RBP8.61□□□□□ -1.03
HMGN1P20-201ENST00000411849 ANKRD24Q8TF21 1146 aa8.61□□□□□ -1.03
HMGN1P20-201ENST00000411849 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
HMGN1P20-201ENST00000411849 ANKRD36BQ8N2N9 1353 aa8.61□□□□□ -1.03
HMGN1P20-201ENST00000411849 UTRNP46939 3433 aa8.6□□□□□ -1.03
HMGN1P20-201ENST00000411849 HSPA6P17066 643 aa8.6□□□□□ -1.03
HMGN1P20-201ENST00000411849 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.6□□□□□ -1.03
HMGN1P20-201ENST00000411849 DDX54Q8TDD1 881 aaKnown RBP8.6□□□□□ -1.03
HMGN1P20-201ENST00000411849 SYTL4Q96C24 671 aaPredicted RBP8.6□□□□□ -1.03
HMGN1P20-201ENST00000411849 ITGB4P16144 1822 aa8.59□□□□□ -1.03
HMGN1P20-201ENST00000411849 UBR3Q6ZT12 1888 aa8.58□□□□□ -1.04
HMGN1P20-201ENST00000411849 CCNL1Q9UK58 526 aaPredicted RBP8.58□□□□□ -1.04
HMGN1P20-201ENST00000411849 CD2APQ9Y5K6 639 aa8.58□□□□□ -1.04
HMGN1P20-201ENST00000411849 ADCY9O60503 1353 aa8.58□□□□□ -1.04
HMGN1P20-201ENST00000411849 ROCK2O75116 1388 aaKnown RBP8.58□□□□□ -1.04
HMGN1P20-201ENST00000411849 EDC4Q6P2E9 1401 aaKnown RBP8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 PRIM1P49642 420 aaKnown RBP8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 KCNQ4P56696 695 aa8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 HDGFL2Q7Z4V5 671 aaPredicted RBP8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 NME9Q86XW9 330 aa8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 NSD2O96028 1365 aa8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 USP47Q96K76 1375 aa8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 SBNO2Q9Y2G9 1366 aa8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 C4BP0C0L5 1744 aa8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 CD163L1Q9NR16 1453 aa8.57□□□□□ -1.04
HMGN1P20-201ENST00000411849 COL23A1Q86Y22 540 aaPredicted RBP8.56□□□□□ -1.04
HMGN1P20-201ENST00000411849 FLAD1Q8NFF5 587 aa8.56□□□□□ -1.04
HMGN1P20-201ENST00000411849 IP6K1Q92551 441 aa8.56□□□□□ -1.04
HMGN1P20-201ENST00000411849 WDR90Q96KV7 1748 aa8.56□□□□□ -1.04
HMGN1P20-201ENST00000411849 TOGARAM1Q9Y4F4 1720 aa8.55□□□□□ -1.04
HMGN1P20-201ENST00000411849 KIF13BQ9NQT8 1826 aa8.55□□□□□ -1.04
HMGN1P20-201ENST00000411849 MSL1Q68DK7 614 aa8.55□□□□□ -1.04
HMGN1P20-201ENST00000411849 ZCRB1Q8TBF4 217 aaKnown RBP8.55□□□□□ -1.04
HMGN1P20-201ENST00000411849 ZNF526Q8TF50 670 aaPredicted RBP8.55□□□□□ -1.04
HMGN1P20-201ENST00000411849 L3MBTL2Q969R5 705 aa8.55□□□□□ -1.04
HMGN1P20-201ENST00000411849 TERF2IPQ9NYB0 399 aa8.55□□□□□ -1.04
HMGN1P20-201ENST00000411849 CICQ96RK0 1608 aaPredicted RBP8.54□□□□□ -1.04
HMGN1P20-201ENST00000411849 PRKAR2AP13861 404 aaKnown RBP8.54□□□□□ -1.04
HMGN1P20-201ENST00000411849 TMC1Q8TDI8 760 aa8.54□□□□□ -1.04
HMGN1P20-201ENST00000411849 LTV1Q96GA3 475 aaPredicted RBP8.54□□□□□ -1.04
HMGN1P20-201ENST00000411849 MEGF6O75095 1541 aa8.54□□□□□ -1.04
HMGN1P20-201ENST00000411849 NSD3Q9BZ95 1437 aa8.54□□□□□ -1.04
HMGN1P20-201ENST00000411849 CGNL1Q0VF96 1302 aa8.54□□□□□ -1.04
HMGN1P20-201ENST00000411849 N4BP2Q86UW6 1770 aaPredicted RBP8.53□□□□□ -1.04
HMGN1P20-201ENST00000411849 C19orf67A6NJJ6 358 aa8.53□□□□□ -1.04
HMGN1P20-201ENST00000411849 APLP1P51693 650 aa8.53□□□□□ -1.04
HMGN1P20-201ENST00000411849 KIF20BQ96Q89 1820 aa8.52□□□□□ -1.04
HMGN1P20-201ENST00000411849 PKD1L3Q7Z443 1732 aa8.52□□□□□ -1.05
HMGN1P20-201ENST00000411849 A0A1W2PP64 1363 aa8.52□□□□□ -1.05
HMGN1P20-201ENST00000411849 BRCA1P38398 1863 aaKnown RBP8.52□□□□□ -1.05
HMGN1P20-201ENST00000411849 AMPHP49418 695 aa8.52□□□□□ -1.05
HMGN1P20-201ENST00000411849 CEP350Q5VT06 3117 aa8.52□□□□□ -1.05
HMGN1P20-201ENST00000411849 SMG6Q86US8 1419 aaKnown RBP8.52□□□□□ -1.05
HMGN1P20-201ENST00000411849 MAP2P11137 1827 aaKnown RBP8.52□□□□□ -1.05
HMGN1P20-201ENST00000411849 ARFGEF1Q9Y6D6 1849 aa8.52□□□□□ -1.05
HMGN1P20-201ENST00000411849 IGSF1Q8N6C5 1336 aa8.52□□□□□ -1.05
HMGN1P20-201ENST00000411849 KIAA1551Q9HCM1 1747 aa8.51□□□□□ -1.05
HMGN1P20-201ENST00000411849 RTL1A6NKG5 1358 aa8.51□□□□□ -1.05
HMGN1P20-201ENST00000411849 PALLDQ8WX93 1383 aa8.51□□□□□ -1.05
HMGN1P20-201ENST00000411849 HOXC9P31274 260 aa8.51□□□□□ -1.05
HMGN1P20-201ENST00000411849 SPDYE1Q8NFV5 336 aaPredicted RBP8.51□□□□□ -1.05
HMGN1P20-201ENST00000411849 RAPGEF4Q8WZA2 1011 aa8.51□□□□□ -1.05
HMGN1P20-201ENST00000411849 KIF3CO14782 793 aa8.5□□□□□ -1.05
HMGN1P20-201ENST00000411849 TOMM70O94826 608 aa8.5□□□□□ -1.05
HMGN1P20-201ENST00000411849 SMARCC1Q92922 1105 aaPredicted RBP8.5□□□□□ -1.05
HMGN1P20-201ENST00000411849 COG3Q96JB2 828 aa8.5□□□□□ -1.05
HMGN1P20-201ENST00000411849 AK7Q96M32 723 aa8.5□□□□□ -1.05
HMGN1P20-201ENST00000411849 PUS7Q96PZ0 661 aaKnown RBP8.5□□□□□ -1.05
HMGN1P20-201ENST00000411849 SLC12A5Q9H2X9 1139 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms