RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 SCTRP47872 440 aa9.12□□□□□ -0.95
LSM5-206ENST00000409987 MPNDQ8N594 471 aa9.12□□□□□ -0.95
LSM5-206ENST00000409987 SIRT1Q96EB6 747 aa9.12□□□□□ -0.95
LSM5-206ENST00000409987 PLA2G2EQ9NZK7 142 aa9.12□□□□□ -0.95
LSM5-206ENST00000409987 FSHRP23945 695 aa9.11□□□□□ -0.95
LSM5-206ENST00000409987 PATL2C9JE40 543 aaKnown RBP9.1□□□□□ -0.95
LSM5-206ENST00000409987 WNT7AO00755 349 aa9.1□□□□□ -0.95
LSM5-206ENST00000409987 CCDC102BQ68D86 513 aa9.1□□□□□ -0.95
LSM5-206ENST00000409987 PHLDB3Q6NSJ2 640 aa9.1□□□□□ -0.95
LSM5-206ENST00000409987 TPCN2Q8NHX9 752 aa9.1□□□□□ -0.95
LSM5-206ENST00000409987 CLP1Q92989 425 aaKnown RBP9.1□□□□□ -0.95
LSM5-206ENST00000409987 MRGPRX2Q96LB1 330 aa9.1□□□□□ -0.95
LSM5-206ENST00000409987 GZF1Q9H116 711 aaPredicted RBP9.1□□□□□ -0.95
LSM5-206ENST00000409987 TMPRSS4Q9NRS4 437 aa9.1□□□□□ -0.95
LSM5-206ENST00000409987 SFI1A8K8P3 1242 aa9.09□□□□□ -0.95
LSM5-206ENST00000409987 ADH1CP00326 375 aa9.09□□□□□ -0.95
LSM5-206ENST00000409987 MYCP01106 439 aaPredicted RBP9.09□□□□□ -0.95
LSM5-206ENST00000409987 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
LSM5-206ENST00000409987 PSME1Q06323 249 aa9.09□□□□□ -0.95
LSM5-206ENST00000409987 SPRYD7Q5W111 196 aa9.09□□□□□ -0.95
LSM5-206ENST00000409987 SEC13P55735 322 aa9.08□□□□□ -0.96
LSM5-206ENST00000409987 SWI5Q1ZZU3 235 aa9.08□□□□□ -0.96
LSM5-206ENST00000409987 IVNS1ABPQ9Y6Y0 642 aa9.08□□□□□ -0.96
LSM5-206ENST00000409987 SSFA2P28290 1259 aa9.07□□□□□ -0.96
LSM5-206ENST00000409987 DHX9Q08211 1270 aaKnown RBP9.07□□□□□ -0.96
LSM5-206ENST00000409987 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
LSM5-206ENST00000409987 B4GALNT3Q6L9W6 998 aa9.07□□□□□ -0.96
LSM5-206ENST00000409987 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
LSM5-206ENST00000409987 CYLDQ9NQC7 956 aa9.07□□□□□ -0.96
LSM5-206ENST00000409987 A0A0G2JS52 829 aa9.06□□□□□ -0.96
LSM5-206ENST00000409987 NR3C2P08235 984 aa9.06□□□□□ -0.96
LSM5-206ENST00000409987 NR5A1Q13285 461 aa9.06□□□□□ -0.96
LSM5-206ENST00000409987 ZNF784Q8NCA9 323 aaPredicted RBP9.06□□□□□ -0.96
LSM5-206ENST00000409987 ATP2B4P23634 1241 aa9.05□□□□□ -0.96
LSM5-206ENST00000409987 PPP1R26Q5T8A7 1209 aaPredicted RBP9.05□□□□□ -0.96
LSM5-206ENST00000409987 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
LSM5-206ENST00000409987 CCDC116Q8IYX3 515 aa9.05□□□□□ -0.96
LSM5-206ENST00000409987 RBM19Q9Y4C8 960 aaKnown RBP9.05□□□□□ -0.96
LSM5-206ENST00000409987 LILRA1O75019 489 aa9.04□□□□□ -0.96
LSM5-206ENST00000409987 STAU1O95793 577 aaKnown RBP9.04□□□□□ -0.96
LSM5-206ENST00000409987 ZNF598Q86UK7 904 aaKnown RBP9.04□□□□□ -0.96
LSM5-206ENST00000409987 PKD2L1Q9P0L9 805 aa9.04□□□□□ -0.96
LSM5-206ENST00000409987 GNEQ9Y223 722 aaKnown RBP9.04□□□□□ -0.96
LSM5-206ENST00000409987 CCDC9Q9Y3X0 531 aaKnown RBP9.04□□□□□ -0.96
LSM5-206ENST00000409987 TMEM229AB2RXF0 380 aa9.03□□□□□ -0.96
LSM5-206ENST00000409987 PRMT3O60678 531 aa9.03□□□□□ -0.96
LSM5-206ENST00000409987 LGR5O75473 907 aa9.03□□□□□ -0.96
LSM5-206ENST00000409987 OCLNQ16625 522 aa9.03□□□□□ -0.96
LSM5-206ENST00000409987 TXNDC2Q86VQ3 553 aa9.03□□□□□ -0.96
LSM5-206ENST00000409987 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.03□□□□□ -0.96
LSM5-206ENST00000409987 ADD1P35611 737 aaKnown RBP9.02□□□□□ -0.97
LSM5-206ENST00000409987 SCNN1DP51172 638 aa9.02□□□□□ -0.97
LSM5-206ENST00000409987 FOXC1Q12948 553 aa9.02□□□□□ -0.97
LSM5-206ENST00000409987 TMCO4Q5TGY1 634 aa9.02□□□□□ -0.97
LSM5-206ENST00000409987 TSEN2Q8NCE0 465 aaKnown RBP9.02□□□□□ -0.97
LSM5-206ENST00000409987 PRIMPOLQ96LW4 560 aa9.02□□□□□ -0.97
LSM5-206ENST00000409987 PRKD2Q9BZL6 878 aa9.02□□□□□ -0.97
LSM5-206ENST00000409987 ESF1Q9H501 851 aaKnown RBP9.02□□□□□ -0.97
LSM5-206ENST00000409987 ZNF358Q9NW07 568 aa9.02□□□□□ -0.97
LSM5-206ENST00000409987 M0R2N6 131 aa9.01□□□□□ -0.97
LSM5-206ENST00000409987 ALDH1A1P00352 501 aa9.01□□□□□ -0.97
LSM5-206ENST00000409987 SCNN1AP37088 669 aa9.01□□□□□ -0.97
LSM5-206ENST00000409987 MYT1Q01538 1121 aa9.01□□□□□ -0.97
LSM5-206ENST00000409987 GDF10P55107 478 aa9□□□□□ -0.97
LSM5-206ENST00000409987 NNTQ13423 1086 aa9□□□□□ -0.97
LSM5-206ENST00000409987 HINFPQ9BQA5 517 aa9□□□□□ -0.97
LSM5-206ENST00000409987 CXXC1Q9P0U4 656 aaPredicted RBP9□□□□□ -0.97
LSM5-206ENST00000409987 V9GY48 417 aaPredicted RBP9□□□□□ -0.97
LSM5-206ENST00000409987 ARID4AP29374 1257 aaPredicted RBP8.99□□□□□ -0.97
LSM5-206ENST00000409987 C1orf216Q8TAB5 229 aa8.99□□□□□ -0.97
LSM5-206ENST00000409987 CCER1Q8TC90 406 aaPredicted RBP8.99□□□□□ -0.97
LSM5-206ENST00000409987 TRIM52Q96A61 297 aa8.99□□□□□ -0.97
LSM5-206ENST00000409987 ETNK1Q9HBU6 452 aa8.99□□□□□ -0.97
LSM5-206ENST00000409987 PGPEP1Q9NXJ5 209 aa8.99□□□□□ -0.97
LSM5-206ENST00000409987 EMILIN1Q9Y6C2 1016 aa8.99□□□□□ -0.97
LSM5-206ENST00000409987 WASLO00401 505 aaPredicted RBP8.98□□□□□ -0.97
LSM5-206ENST00000409987 RANGAP1P46060 587 aaPredicted RBP8.98□□□□□ -0.97
LSM5-206ENST00000409987 CYP2U1Q7Z449 544 aa8.98□□□□□ -0.97
LSM5-206ENST00000409987 SNIP1Q8TAD8 396 aaKnown RBP8.98□□□□□ -0.97
LSM5-206ENST00000409987 GDF9O60383 454 aa8.97□□□□□ -0.97
LSM5-206ENST00000409987 INHAP05111 366 aa8.97□□□□□ -0.97
LSM5-206ENST00000409987 WEE1P30291 646 aa8.97□□□□□ -0.97
LSM5-206ENST00000409987 MFAP1P55081 439 aaKnown RBP8.97□□□□□ -0.97
LSM5-206ENST00000409987 SND1Q7KZF4 910 aaKnown RBP eCLIP8.97□□□□□ -0.97
LSM5-206ENST00000409987 TAS1R3Q7RTX0 852 aa8.97□□□□□ -0.97
LSM5-206ENST00000409987 WASF2Q9Y6W5 498 aa8.97□□□□□ -0.97
LSM5-206ENST00000409987 J3QL48 77 aa8.96□□□□□ -0.98
LSM5-206ENST00000409987 GNRH1P01148 92 aa8.96□□□□□ -0.98
LSM5-206ENST00000409987 EPHA4P54764 986 aa8.96□□□□□ -0.98
LSM5-206ENST00000409987 GAS2L2Q8NHY3 880 aa8.96□□□□□ -0.98
LSM5-206ENST00000409987 SERTAD1Q9UHV2 236 aa8.96□□□□□ -0.98
LSM5-206ENST00000409987 SERPINB4P48594 390 aa8.95□□□□□ -0.98
LSM5-206ENST00000409987 CBLBQ13191 982 aa8.95□□□□□ -0.98
LSM5-206ENST00000409987 TNS4Q8IZW8 715 aa8.95□□□□□ -0.98
LSM5-206ENST00000409987 KDF1Q8NAX2 398 aaPredicted RBP8.95□□□□□ -0.98
LSM5-206ENST00000409987 SLC4A9Q96Q91 983 aa8.95□□□□□ -0.98
LSM5-206ENST00000409987 PURBQ96QR8 312 aaKnown RBP8.95□□□□□ -0.98
LSM5-206ENST00000409987 KLF16Q9BXK1 252 aaPredicted RBP8.95□□□□□ -0.98
LSM5-206ENST00000409987 RAB6BQ9NRW1 208 aa8.95□□□□□ -0.98
LSM5-206ENST00000409987 TNFRSF10AO00220 468 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms