RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
PMS1-204ENST00000409823 SPATA31A1Q5TZJ5 1347 aa16.52■□□□□ 0.24
PMS1-204ENST00000409823 FAM208AQ9UK61 1670 aaKnown RBP16.52■□□□□ 0.24
PMS1-204ENST00000409823 PLEKHO1Q53GL0 409 aaPredicted RBP16.52■□□□□ 0.23
PMS1-204ENST00000409823 GAS2L2Q8NHY3 880 aa16.51■□□□□ 0.23
PMS1-204ENST00000409823 SPATA31A5Q5VU36 1347 aa16.51■□□□□ 0.23
PMS1-204ENST00000409823 SPATA31A7Q8IWB4 1347 aa16.51■□□□□ 0.23
PMS1-204ENST00000409823 FAM98CQ17RN3 349 aaKnown RBP16.51■□□□□ 0.23
PMS1-204ENST00000409823 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
PMS1-204ENST00000409823 NRAPQ86VF7 1730 aa16.5■□□□□ 0.23
PMS1-204ENST00000409823 ZNF521Q96K83 1311 aa16.5■□□□□ 0.23
PMS1-204ENST00000409823 A0A0G2JS52 829 aa16.49■□□□□ 0.23
PMS1-204ENST00000409823 MYT1Q01538 1121 aa16.49■□□□□ 0.23
PMS1-204ENST00000409823 MPRIPQ6WCQ1 1025 aa16.49■□□□□ 0.23
PMS1-204ENST00000409823 LAS1LQ9Y4W2 734 aaKnown RBP16.49■□□□□ 0.23
PMS1-204ENST00000409823 VPS72Q15906 364 aa16.49■□□□□ 0.23
PMS1-204ENST00000409823 AMOTQ4VCS5 1084 aa16.49■□□□□ 0.23
PMS1-204ENST00000409823 GNAT3A8MTJ3 354 aa16.49■□□□□ 0.23
PMS1-204ENST00000409823 RTF1Q92541 710 aaKnown RBP16.49■□□□□ 0.23
PMS1-204ENST00000409823 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
PMS1-204ENST00000409823 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
PMS1-204ENST00000409823 C1orf141Q5JVX7 400 aa16.48■□□□□ 0.23
PMS1-204ENST00000409823 ZCRB1Q8TBF4 217 aaKnown RBP16.48■□□□□ 0.23
PMS1-204ENST00000409823 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
PMS1-204ENST00000409823 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
PMS1-204ENST00000409823 CYP27B1O15528 508 aa16.48■□□□□ 0.23
PMS1-204ENST00000409823 NWD2Q9ULI1 1742 aa16.47■□□□□ 0.23
PMS1-204ENST00000409823 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
PMS1-204ENST00000409823 QTRT2Q9H974 415 aaKnown RBP16.47■□□□□ 0.23
PMS1-204ENST00000409823 OVOS2A0A0G2JMS6 1433 aa16.47■□□□□ 0.23
PMS1-204ENST00000409823 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
PMS1-204ENST00000409823 IL17REQ8NFR9 667 aa16.46■□□□□ 0.23
PMS1-204ENST00000409823 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
PMS1-204ENST00000409823 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
PMS1-204ENST00000409823 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
PMS1-204ENST00000409823 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
PMS1-204ENST00000409823 TSR2Q969E8 191 aaKnown RBP16.45■□□□□ 0.22
PMS1-204ENST00000409823 GJD4Q96KN9 370 aaPredicted RBP16.45■□□□□ 0.22
PMS1-204ENST00000409823 PHKG2P15735 406 aa16.45■□□□□ 0.22
PMS1-204ENST00000409823 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
PMS1-204ENST00000409823 LMOD3Q0VAK6 560 aa16.44■□□□□ 0.22
PMS1-204ENST00000409823 NGEFQ8N5V2 710 aa16.44■□□□□ 0.22
PMS1-204ENST00000409823 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
PMS1-204ENST00000409823 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
PMS1-204ENST00000409823 THRAP3Q9Y2W1 955 aaKnown RBP16.44■□□□□ 0.22
PMS1-204ENST00000409823 EXOC5O00471 708 aa16.43■□□□□ 0.22
PMS1-204ENST00000409823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.225e-7■■■□□ 15.2
PMS1-204ENST00000409823 DDB1Q16531 1140 aa16.43■□□□□ 0.22
PMS1-204ENST00000409823 WDR63Q8IWG1 891 aa16.43■□□□□ 0.22
PMS1-204ENST00000409823 DISP2A7MBM2 1401 aa16.43■□□□□ 0.22
PMS1-204ENST00000409823 SLFN5Q08AF3 891 aa16.43■□□□□ 0.22
PMS1-204ENST00000409823 PCDH11XQ9BZA7 1347 aa16.42■□□□□ 0.22
PMS1-204ENST00000409823 PCDH11YQ9BZA8 1340 aa16.42■□□□□ 0.22
PMS1-204ENST00000409823 BARGINQ6ZT62 677 aa16.42■□□□□ 0.22
PMS1-204ENST00000409823 PDE3BQ13370 1112 aa16.41■□□□□ 0.22
PMS1-204ENST00000409823 FAM182BQ5T319 152 aa16.41■□□□□ 0.22
PMS1-204ENST00000409823 DUSP27Q5VZP5 1158 aa16.41■□□□□ 0.22
PMS1-204ENST00000409823 E9PSI1 815 aa16.4■□□□□ 0.22
PMS1-204ENST00000409823 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
PMS1-204ENST00000409823 PARP4Q9UKK3 1724 aaKnown RBP16.4■□□□□ 0.22
PMS1-204ENST00000409823 ATRNO75882 1429 aa16.39■□□□□ 0.22
PMS1-204ENST00000409823 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
PMS1-204ENST00000409823 HTATSF1O43719 755 aaKnown RBP16.39■□□□□ 0.21
PMS1-204ENST00000409823 TEFQ10587 303 aa16.39■□□□□ 0.21
PMS1-204ENST00000409823 RGS17Q9UGC6 210 aaPredicted RBP16.39■□□□□ 0.21
PMS1-204ENST00000409823 FANCIQ9NVI1 1328 aa16.39■□□□□ 0.21
PMS1-204ENST00000409823 ZNF772Q68DY9 489 aaPredicted RBP16.38■□□□□ 0.21
PMS1-204ENST00000409823 CDCA7Q9BWT1 371 aaPredicted RBP16.38■□□□□ 0.21
PMS1-204ENST00000409823 MBIPQ9NS73 344 aa16.38■□□□□ 0.21
PMS1-204ENST00000409823 KDM6AO15550 1401 aaPredicted RBP16.38■□□□□ 0.21
PMS1-204ENST00000409823 GLI3P10071 1580 aa16.38■□□□□ 0.21
PMS1-204ENST00000409823 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
PMS1-204ENST00000409823 MARCH10Q8NA82 808 aaPredicted RBP16.38■□□□□ 0.21
PMS1-204ENST00000409823 DCAF5Q96JK2 942 aa16.38■□□□□ 0.21
PMS1-204ENST00000409823 CFAP44Q96MT7 982 aa16.38■□□□□ 0.21
PMS1-204ENST00000409823 PKD1L3Q7Z443 1732 aa16.37■□□□□ 0.21
PMS1-204ENST00000409823 ELL2O00472 640 aaPredicted RBP16.37■□□□□ 0.21
PMS1-204ENST00000409823 CALD1Q05682 793 aaKnown RBP16.37■□□□□ 0.21
PMS1-204ENST00000409823 SEPT12Q8IYM1 358 aa16.37■□□□□ 0.21
PMS1-204ENST00000409823 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
PMS1-204ENST00000409823 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
PMS1-204ENST00000409823 IFT57Q9NWB7 429 aa16.37■□□□□ 0.21
PMS1-204ENST00000409823 TSPYL4Q9UJ04 414 aa16.37■□□□□ 0.21
PMS1-204ENST00000409823 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.37■□□□□ 0.21
PMS1-204ENST00000409823 CEMIPQ8WUJ3 1361 aa16.36■□□□□ 0.21
PMS1-204ENST00000409823 GNAI1P63096 354 aa16.36■□□□□ 0.21
PMS1-204ENST00000409823 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
PMS1-204ENST00000409823 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
PMS1-204ENST00000409823 TNS2Q63HR2 1409 aa16.36■□□□□ 0.21
PMS1-204ENST00000409823 ZNF853P0CG23 659 aa16.35■□□□□ 0.21
PMS1-204ENST00000409823 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
PMS1-204ENST00000409823 IL16Q14005 1332 aa16.35■□□□□ 0.21
PMS1-204ENST00000409823 KCNQ3O43525 872 aa16.35■□□□□ 0.21
PMS1-204ENST00000409823 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
PMS1-204ENST00000409823 EXOSC9Q06265 439 aaKnown RBP16.35■□□□□ 0.21
PMS1-204ENST00000409823 POTEAQ6S8J7 498 aa16.35■□□□□ 0.21
PMS1-204ENST00000409823 ACSBG1Q96GR2 724 aa16.35■□□□□ 0.21
PMS1-204ENST00000409823 SHANK3Q9BYB0 1731 aa16.35■□□□□ 0.21
PMS1-204ENST00000409823 BTBD11A6QL63 1104 aa16.34■□□□□ 0.21
PMS1-204ENST00000409823 CABP4P57796 275 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms