RNA–Protein interactions for RNA: ENST00000409760.1

VAMP8-202, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-202ENST00000409760 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
VAMP8-202ENST00000409760 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
VAMP8-202ENST00000409760 MTFR1LQ9H019 292 aa13.17□□□□□ -0.3
VAMP8-202ENST00000409760 GGNBP2Q9H3C7 697 aa13.17□□□□□ -0.3
VAMP8-202ENST00000409760 QSER1Q2KHR3 1735 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 NSD3Q9BZ95 1437 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 AMPHP49418 695 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 NBPF6Q5VWK0 638 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 NBPF4Q96M43 638 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 CARD14Q9BXL6 1004 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 KIF24Q5T7B8 1368 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 LY75O60449 1722 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 COL24A1Q17RW2 1714 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 KIF20BQ96Q89 1820 aa13.16□□□□□ -0.3
VAMP8-202ENST00000409760 TUBGCP6Q96RT7 1819 aa13.14□□□□□ -0.31
VAMP8-202ENST00000409760 YY1P25490 414 aa13.14□□□□□ -0.31
VAMP8-202ENST00000409760 PRIM1P49642 420 aaKnown RBP13.14□□□□□ -0.31
VAMP8-202ENST00000409760 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
VAMP8-202ENST00000409760 FHDC1Q9C0D6 1143 aaPredicted RBP13.14□□□□□ -0.31
VAMP8-202ENST00000409760 INSRP06213 1382 aa13.14□□□□□ -0.31
VAMP8-202ENST00000409760 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
VAMP8-202ENST00000409760 MAP3K5Q99683 1374 aa13.13□□□□□ -0.31
VAMP8-202ENST00000409760 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
VAMP8-202ENST00000409760 SLC27A3Q5K4L6 730 aa13.13□□□□□ -0.31
VAMP8-202ENST00000409760 USHBP1Q8N6Y0 703 aa13.13□□□□□ -0.31
VAMP8-202ENST00000409760 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
VAMP8-202ENST00000409760 PANK3Q9H999 370 aa13.13□□□□□ -0.31
VAMP8-202ENST00000409760 ANKRD26Q9UPS8 1709 aa13.13□□□□□ -0.31
VAMP8-202ENST00000409760 PNPLA7Q6ZV29 1317 aa13.13□□□□□ -0.31
VAMP8-202ENST00000409760 FLT4P35916 1363 aa13.12□□□□□ -0.31
VAMP8-202ENST00000409760 KCNQ4P56696 695 aa13.12□□□□□ -0.31
VAMP8-202ENST00000409760 KNSTRNQ9Y448 316 aa13.12□□□□□ -0.31
VAMP8-202ENST00000409760 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
VAMP8-202ENST00000409760 UTRNP46939 3433 aa13.11□□□□□ -0.31
VAMP8-202ENST00000409760 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
VAMP8-202ENST00000409760 ARXQ96QS3 562 aa13.1□□□□□ -0.31
VAMP8-202ENST00000409760 EMILIN1Q9Y6C2 1016 aa13.1□□□□□ -0.31
VAMP8-202ENST00000409760 SMG6Q86US8 1419 aaKnown RBP13.1□□□□□ -0.31
VAMP8-202ENST00000409760 PKD1L3Q7Z443 1732 aa13.1□□□□□ -0.31
VAMP8-202ENST00000409760 SYTL4Q96C24 671 aaPredicted RBP13.09□□□□□ -0.31
VAMP8-202ENST00000409760 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
VAMP8-202ENST00000409760 CYP27B1O15528 508 aa13.08□□□□□ -0.32
VAMP8-202ENST00000409760 SLC16A10Q8TF71 515 aa13.08□□□□□ -0.32
VAMP8-202ENST00000409760 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
VAMP8-202ENST00000409760 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
VAMP8-202ENST00000409760 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
VAMP8-202ENST00000409760 PCDH11XQ9BZA7 1347 aa13.06□□□□□ -0.32
VAMP8-202ENST00000409760 PCDH11YQ9BZA8 1340 aa13.06□□□□□ -0.32
VAMP8-202ENST00000409760 C5P01031 1676 aa13.05□□□□□ -0.32
VAMP8-202ENST00000409760 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
VAMP8-202ENST00000409760 MORC1Q86VD1 984 aa13.05□□□□□ -0.32
VAMP8-202ENST00000409760 TFCP2L1Q9NZI6 479 aa13.05□□□□□ -0.32
VAMP8-202ENST00000409760 WASHC2AQ641Q2 1341 aa13.05□□□□□ -0.32
VAMP8-202ENST00000409760 COL23A1Q86Y22 540 aaPredicted RBP13.04□□□□□ -0.32
VAMP8-202ENST00000409760 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
VAMP8-202ENST00000409760 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
VAMP8-202ENST00000409760 ZNF784Q8NCA9 323 aaPredicted RBP13.03□□□□□ -0.32
VAMP8-202ENST00000409760 POLKQ9UBT6 870 aa13.03□□□□□ -0.32
VAMP8-202ENST00000409760 ITGB4P16144 1822 aa13.03□□□□□ -0.32
VAMP8-202ENST00000409760 TAF1LQ8IZX4 1826 aa13.03□□□□□ -0.32
VAMP8-202ENST00000409760 NPC1L1Q9UHC9 1359 aa13.03□□□□□ -0.32
VAMP8-202ENST00000409760 MAP2P11137 1827 aaKnown RBP13.02□□□□□ -0.32
VAMP8-202ENST00000409760 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.33
VAMP8-202ENST00000409760 PER1O15534 1290 aaPredicted RBP13.02□□□□□ -0.33
VAMP8-202ENST00000409760 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.33
VAMP8-202ENST00000409760 AMIGO3Q86WK7 504 aa13.02□□□□□ -0.33
VAMP8-202ENST00000409760 NLGN2Q8NFZ4 835 aa13.02□□□□□ -0.33
VAMP8-202ENST00000409760 EYA1Q99502 592 aa13.02□□□□□ -0.33
VAMP8-202ENST00000409760 C4BP0C0L5 1744 aa13.01□□□□□ -0.33
VAMP8-202ENST00000409760 POLD1P28340 1107 aa13□□□□□ -0.33
VAMP8-202ENST00000409760 TNNT2P45379 298 aaPredicted RBP13□□□□□ -0.33
VAMP8-202ENST00000409760 MPRIPQ6WCQ1 1025 aa13□□□□□ -0.33
VAMP8-202ENST00000409760 PIGBQ92521 554 aa13□□□□□ -0.33
VAMP8-202ENST00000409760 GOLGB1Q14789 3259 aaKnown RBP13□□□□□ -0.33
VAMP8-202ENST00000409760 CHD4Q14839 1912 aa13□□□□□ -0.33
VAMP8-202ENST00000409760 PLEKHG2Q9H7P9 1386 aa12.99□□□□□ -0.33
VAMP8-202ENST00000409760 EIF4A2Q14240 407 aaKnown RBP12.99□□□□□ -0.33
VAMP8-202ENST00000409760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.99□□□□□ -0.33
VAMP8-202ENST00000409760 UBR3Q6ZT12 1888 aa12.98□□□□□ -0.33
VAMP8-202ENST00000409760 MSL1Q68DK7 614 aa12.98□□□□□ -0.33
VAMP8-202ENST00000409760 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
VAMP8-202ENST00000409760 PHKG2P15735 406 aa12.97□□□□□ -0.33
VAMP8-202ENST00000409760 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
VAMP8-202ENST00000409760 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
VAMP8-202ENST00000409760 YBX3P16989 372 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■□□□□ 9.5
VAMP8-202ENST00000409760 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
VAMP8-202ENST00000409760 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
VAMP8-202ENST00000409760 KDRP35968 1356 aa12.95□□□□□ -0.34
VAMP8-202ENST00000409760 ITPK1Q13572 414 aa12.95□□□□□ -0.34
VAMP8-202ENST00000409760 GPR162Q16538 588 aa12.95□□□□□ -0.34
VAMP8-202ENST00000409760 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
VAMP8-202ENST00000409760 ASAP1Q9ULH1 1129 aa12.95□□□□□ -0.34
VAMP8-202ENST00000409760 LOC102724428A0A0B4J2F2 783 aa12.94□□□□□ -0.34
VAMP8-202ENST00000409760 MSH5O43196 834 aa12.94□□□□□ -0.34
VAMP8-202ENST00000409760 HMGB2P26583 209 aaKnown RBP12.94□□□□□ -0.34
VAMP8-202ENST00000409760 SIK1P57059 783 aa12.94□□□□□ -0.34
VAMP8-202ENST00000409760 CC2D1BQ5T0F9 858 aaKnown RBP12.94□□□□□ -0.34
VAMP8-202ENST00000409760 FLAD1Q8NFF5 587 aa12.94□□□□□ -0.34
VAMP8-202ENST00000409760 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
VAMP8-202ENST00000409760 SLC4A9Q96Q91 983 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 282.6 ms