RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 TWISTNBQ3B726 338 aaPredicted RBP12.71□□□□□ -0.38
CUL1-202ENST00000409469 IFT57Q9NWB7 429 aa12.71□□□□□ -0.38
CUL1-202ENST00000409469 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.38
CUL1-202ENST00000409469 ZNF853P0CG23 659 aa12.7□□□□□ -0.38
CUL1-202ENST00000409469 CDK11BP21127 795 aaKnown RBP12.69□□□□□ -0.38
CUL1-202ENST00000409469 BACH2Q9BYV9 841 aa12.69□□□□□ -0.38
CUL1-202ENST00000409469 LRRC59Q96AG4 307 aaKnown RBP12.69□□□□□ -0.38
CUL1-202ENST00000409469 RGPD1P0DJD0 1748 aa12.69□□□□□ -0.38
CUL1-202ENST00000409469 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
CUL1-202ENST00000409469 CT47B1P0C2W7 299 aaPredicted RBP12.68□□□□□ -0.38
CUL1-202ENST00000409469 LMOD3Q0VAK6 560 aa12.68□□□□□ -0.38
CUL1-202ENST00000409469 IGSF1Q8N6C5 1336 aa12.68□□□□□ -0.38
CUL1-202ENST00000409469 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
CUL1-202ENST00000409469 ARHGEF10O15013 1369 aa12.67□□□□□ -0.38
CUL1-202ENST00000409469 CALD1Q05682 793 aaKnown RBP12.67□□□□□ -0.38
CUL1-202ENST00000409469 MRPL50Q8N5N7 158 aaKnown RBP12.67□□□□□ -0.38
CUL1-202ENST00000409469 TMEM94Q12767 1356 aa12.66□□□□□ -0.38
CUL1-202ENST00000409469 KIF16BQ96L93 1317 aa12.66□□□□□ -0.38
CUL1-202ENST00000409469 NBPF6Q5VWK0 638 aa12.66□□□□□ -0.38
CUL1-202ENST00000409469 NBPF4Q96M43 638 aa12.66□□□□□ -0.38
CUL1-202ENST00000409469 NECTIN2Q92692 538 aa12.65□□□□□ -0.38
CUL1-202ENST00000409469 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.38
CUL1-202ENST00000409469 KDRP35968 1356 aa12.65□□□□□ -0.39
CUL1-202ENST00000409469 MS4A1P11836 297 aa12.64□□□□□ -0.39
CUL1-202ENST00000409469 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
CUL1-202ENST00000409469 ALDH1L2Q3SY69 923 aa12.64□□□□□ -0.39
CUL1-202ENST00000409469 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
CUL1-202ENST00000409469 GCP02774 474 aa12.64□□□□□ -0.39
CUL1-202ENST00000409469 C8orf34Q49A92 452 aa12.64□□□□□ -0.39
CUL1-202ENST00000409469 CABLES1Q8TDN4 633 aa12.64□□□□□ -0.39
CUL1-202ENST00000409469 LTN1O94822 1766 aa12.64□□□□□ -0.39
CUL1-202ENST00000409469 CHL1O00533 1208 aa12.63□□□□□ -0.39
CUL1-202ENST00000409469 ANP32AP39687 249 aaKnown RBP12.63□□□□□ -0.39
CUL1-202ENST00000409469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.63□□□□□ -0.39
CUL1-202ENST00000409469 TSPYL4Q9UJ04 414 aa12.63□□□□□ -0.39
CUL1-202ENST00000409469 PDZRN3Q9UPQ7 1066 aa12.63□□□□□ -0.39
CUL1-202ENST00000409469 NWD1Q149M9 1564 aa12.63□□□□□ -0.39
CUL1-202ENST00000409469 C19orf44Q9H6X5 657 aa12.63□□□□□ -0.39
CUL1-202ENST00000409469 DDX19BQ9UMR2 479 aa12.63□□□□□ -0.39
CUL1-202ENST00000409469 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
CUL1-202ENST00000409469 STRCP1A6NGW2 1772 aa12.63□□□□□ -0.39
CUL1-202ENST00000409469 CRB1P82279 1406 aa12.63□□□□□ -0.39
CUL1-202ENST00000409469 IPO8O15397 1037 aaKnown RBP12.63□□□□□ -0.39
CUL1-202ENST00000409469 C1orf167Q5SNV9 1468 aa12.62□□□□□ -0.39
CUL1-202ENST00000409469 NFAT5O94916 1531 aa12.62□□□□□ -0.39
CUL1-202ENST00000409469 ATF3P18847 181 aa12.62□□□□□ -0.39
CUL1-202ENST00000409469 IP6K1Q92551 441 aa12.62□□□□□ -0.39
CUL1-202ENST00000409469 ZBTB40Q9NUA8 1239 aa12.62□□□□□ -0.39
CUL1-202ENST00000409469 KDM4FA0A1W2PPD8 638 aa12.61□□□□□ -0.39
CUL1-202ENST00000409469 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
CUL1-202ENST00000409469 RGPD2P0DJD1 1756 aa12.6□□□□□ -0.39
CUL1-202ENST00000409469 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
CUL1-202ENST00000409469 RWDD1Q9H446 243 aaPredicted RBP12.6□□□□□ -0.39
CUL1-202ENST00000409469 GNAT3A8MTJ3 354 aa12.59□□□□□ -0.39
CUL1-202ENST00000409469 G2E3Q7L622 706 aa12.59□□□□□ -0.39
CUL1-202ENST00000409469 MSH6P52701 1360 aa12.59□□□□□ -0.39
CUL1-202ENST00000409469 SEC24BO95487 1268 aa12.59□□□□□ -0.39
CUL1-202ENST00000409469 FAM161AQ3B820 660 aa12.59□□□□□ -0.39
CUL1-202ENST00000409469 LGR6Q9HBX8 967 aa12.59□□□□□ -0.39
CUL1-202ENST00000409469 F6X3S4 739 aa12.59□□□□□ -0.39
CUL1-202ENST00000409469 ZBTB7BO15156 539 aaPredicted RBP12.59□□□□□ -0.39
CUL1-202ENST00000409469 SLC4A2P04920 1241 aa12.59□□□□□ -0.39
CUL1-202ENST00000409469 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
CUL1-202ENST00000409469 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
CUL1-202ENST00000409469 CHRNA2Q15822 529 aa12.58□□□□□ -0.4
CUL1-202ENST00000409469 ANKRD24Q8TF21 1146 aa12.58□□□□□ -0.4
CUL1-202ENST00000409469 IPO9Q96P70 1041 aaKnown RBP12.58□□□□□ -0.4
CUL1-202ENST00000409469 MST1RQ04912 1400 aa12.57□□□□□ -0.4
CUL1-202ENST00000409469 SLC4A3P48751 1232 aa12.57□□□□□ -0.4
CUL1-202ENST00000409469 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
CUL1-202ENST00000409469 MPRIPQ6WCQ1 1025 aa12.57□□□□□ -0.4
CUL1-202ENST00000409469 ZNF428Q96B54 188 aa12.57□□□□□ -0.4
CUL1-202ENST00000409469 ABCC4O15439 1325 aa12.57□□□□□ -0.4
CUL1-202ENST00000409469 SLC4A10Q6U841 1118 aa12.56□□□□□ -0.4
CUL1-202ENST00000409469 NOP58Q9Y2X3 529 aaKnown RBP12.56□□□□□ -0.4
CUL1-202ENST00000409469 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
CUL1-202ENST00000409469 BRPF1P55201 1214 aaPredicted RBP12.56□□□□□ -0.4
CUL1-202ENST00000409469 LNPKQ9C0E8 428 aa12.56□□□□□ -0.4
CUL1-202ENST00000409469 KCNQ3O43525 872 aa12.55□□□□□ -0.4
CUL1-202ENST00000409469 SIRT2Q8IXJ6 389 aa12.55□□□□□ -0.4
CUL1-202ENST00000409469 RTL1A6NKG5 1358 aa12.55□□□□□ -0.4
CUL1-202ENST00000409469 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
CUL1-202ENST00000409469 RGS12O14924 1447 aa12.55□□□□□ -0.4
CUL1-202ENST00000409469 KIF24Q5T7B8 1368 aa12.55□□□□□ -0.4
CUL1-202ENST00000409469 ZNF530Q6P9A1 599 aaPredicted RBP12.55□□□□□ -0.4
CUL1-202ENST00000409469 PXDNQ92626 1479 aa12.54□□□□□ -0.4
CUL1-202ENST00000409469 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
CUL1-202ENST00000409469 HDAC1Q13547 482 aaPredicted RBP12.54□□□□□ -0.4
CUL1-202ENST00000409469 AAMPQ13685 434 aa12.54□□□□□ -0.4
CUL1-202ENST00000409469 ARHGAP45Q92619 1136 aa12.54□□□□□ -0.4
CUL1-202ENST00000409469 API5Q9BZZ5 524 aaKnown RBP12.53□□□□□ -0.4
CUL1-202ENST00000409469 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
CUL1-202ENST00000409469 MED1Q15648 1581 aaPredicted RBP12.53□□□□□ -0.4
CUL1-202ENST00000409469 USP19O94966 1318 aa12.53□□□□□ -0.4
CUL1-202ENST00000409469 RGPD5Q99666 1765 aa12.53□□□□□ -0.4
CUL1-202ENST00000409469 EIF2S2P20042 333 aaKnown RBP12.53□□□□□ -0.4
CUL1-202ENST00000409469 MEIS3Q99687 375 aa12.53□□□□□ -0.4
CUL1-202ENST00000409469 KIAA0232Q92628 1395 aa12.53□□□□□ -0.4
CUL1-202ENST00000409469 LMTK3Q96Q04 1460 aa12.52□□□□□ -0.4
CUL1-202ENST00000409469 APBB1O00213 710 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms