RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 PLSCR1O15162 318 aa22.37■■□□□ 1.17
CGREF1-206ENST00000405600 USHBP1Q8N6Y0 703 aa22.37■■□□□ 1.17
CGREF1-206ENST00000405600 FLT4P35916 1363 aa22.37■■□□□ 1.17
CGREF1-206ENST00000405600 SMG6Q86US8 1419 aaKnown RBP22.37■■□□□ 1.17
CGREF1-206ENST00000405600 RREB1Q92766 1687 aa22.36■■□□□ 1.17
CGREF1-206ENST00000405600 NUP188Q5SRE5 1749 aa22.36■■□□□ 1.17
CGREF1-206ENST00000405600 ANKRD26Q9UPS8 1709 aa22.35■■□□□ 1.17
CGREF1-206ENST00000405600 RGPD2P0DJD1 1756 aa22.35■■□□□ 1.17
CGREF1-206ENST00000405600 HSP90AB2PQ58FF8 381 aa22.34■■□□□ 1.17
CGREF1-206ENST00000405600 NBPF6Q5VWK0 638 aa22.33■■□□□ 1.17
CGREF1-206ENST00000405600 NBPF4Q96M43 638 aa22.33■■□□□ 1.17
CGREF1-206ENST00000405600 INSRP06213 1382 aa22.33■■□□□ 1.17
CGREF1-206ENST00000405600 FAM208AQ9UK61 1670 aaKnown RBP22.33■■□□□ 1.16
CGREF1-206ENST00000405600 TNNT2P45379 298 aaPredicted RBP22.32■■□□□ 1.16
CGREF1-206ENST00000405600 CCDC184Q52MB2 194 aa22.32■■□□□ 1.16
CGREF1-206ENST00000405600 EMILIN1Q9Y6C2 1016 aa22.32■■□□□ 1.16
CGREF1-206ENST00000405600 BCL9O00512 1426 aa22.32■■□□□ 1.16
CGREF1-206ENST00000405600 MORC1Q86VD1 984 aa22.31■■□□□ 1.16
CGREF1-206ENST00000405600 FAM9BQ8IZU0 186 aa22.31■■□□□ 1.16
CGREF1-206ENST00000405600 SYTL4Q96C24 671 aaPredicted RBP22.31■■□□□ 1.16
CGREF1-206ENST00000405600 TXNRD1Q16881 649 aa22.31■■□□□ 1.16
CGREF1-206ENST00000405600 PROM2Q8N271 834 aa22.31■■□□□ 1.16
CGREF1-206ENST00000405600 ZCRB1Q8TBF4 217 aaKnown RBP22.31■■□□□ 1.16
CGREF1-206ENST00000405600 PPP2R1AP30153 589 aa22.3■■□□□ 1.16
CGREF1-206ENST00000405600 RAPGEF4Q8WZA2 1011 aa22.29■■□□□ 1.16
CGREF1-206ENST00000405600 LRP5O75197 1615 aa22.28■■□□□ 1.16
CGREF1-206ENST00000405600 PNISRQ8TF01 805 aaKnown RBP22.28■■□□□ 1.16
CGREF1-206ENST00000405600 ANO8Q9HCE9 1232 aaPredicted RBP22.28■■□□□ 1.16
CGREF1-206ENST00000405600 POLKQ9UBT6 870 aa22.28■■□□□ 1.16
CGREF1-206ENST00000405600 TATP17735 454 aaPredicted RBP22.27■■□□□ 1.16
CGREF1-206ENST00000405600 STK32BQ9NY57 414 aa22.26■■□□□ 1.15
CGREF1-206ENST00000405600 NHSQ6T4R5 1651 aa22.25■■□□□ 1.15
CGREF1-206ENST00000405600 MEGF6O75095 1541 aa22.24■■□□□ 1.15
CGREF1-206ENST00000405600 RGPD3A6NKT7 1758 aaPredicted RBP22.24■■□□□ 1.15
CGREF1-206ENST00000405600 RGPD4Q7Z3J3 1758 aa22.24■■□□□ 1.15
CGREF1-206ENST00000405600 PRIM1P49642 420 aaKnown RBP22.24■■□□□ 1.15
CGREF1-206ENST00000405600 HNRNPUQ00839 825 aaKnown RBP eCLIP22.24■■□□□ 1.15
CGREF1-206ENST00000405600 PPP1R1BQ9UD71 204 aaPredicted RBP22.23■■□□□ 1.15
CGREF1-206ENST00000405600 MAP2P11137 1827 aaKnown RBP22.23■■□□□ 1.15
CGREF1-206ENST00000405600 SPON1Q9HCB6 807 aa22.22■■□□□ 1.15
CGREF1-206ENST00000405600 BTAF1O14981 1849 aa22.22■■□□□ 1.15
CGREF1-206ENST00000405600 PDGFDQ9GZP0 370 aaPredicted RBP22.21■■□□□ 1.15
CGREF1-206ENST00000405600 SLC15A2Q16348 729 aa22.2■■□□□ 1.14
CGREF1-206ENST00000405600 ZBTB7AO95365 584 aa22.19■■□□□ 1.14
CGREF1-206ENST00000405600 CFAP53Q96M91 514 aa22.19■■□□□ 1.14
CGREF1-206ENST00000405600 WDR43Q15061 677 aaKnown RBP eCLIP22.18■■□□□ 1.14
CGREF1-206ENST00000405600 KCNQ4P56696 695 aa22.17■■□□□ 1.14
CGREF1-206ENST00000405600 ATF5Q9Y2D1 282 aaPredicted RBP22.17■■□□□ 1.14
CGREF1-206ENST00000405600 DOT1LQ8TEK3 1739 aa22.16■■□□□ 1.14
CGREF1-206ENST00000405600 SHANK3Q9BYB0 1731 aa22.16■■□□□ 1.14
CGREF1-206ENST00000405600 EIF4A2Q14240 407 aaKnown RBP22.15■■□□□ 1.14
CGREF1-206ENST00000405600 EYA1Q99502 592 aa22.15■■□□□ 1.14
CGREF1-206ENST00000405600 LRRC4BQ9NT99 713 aa22.15■■□□□ 1.14
CGREF1-206ENST00000405600 PCDH11XQ9BZA7 1347 aa22.15■■□□□ 1.14
CGREF1-206ENST00000405600 PCDH11YQ9BZA8 1340 aa22.15■■□□□ 1.14
CGREF1-206ENST00000405600 NCAPD2Q15021 1401 aa22.14■■□□□ 1.14
CGREF1-206ENST00000405600 ZBED9Q6R2W3 1325 aa22.13■■□□□ 1.13
CGREF1-206ENST00000405600 MPRIPQ6WCQ1 1025 aa22.12■■□□□ 1.13
CGREF1-206ENST00000405600 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
CGREF1-206ENST00000405600 ZNF827Q17R98 1081 aa22.11■■□□□ 1.13
CGREF1-206ENST00000405600 SPG7Q9UQ90 795 aa22.11■■□□□ 1.13
CGREF1-206ENST00000405600 CYP27B1O15528 508 aa22.1■■□□□ 1.13
CGREF1-206ENST00000405600 MTHFSP49914 203 aa22.1■■□□□ 1.13
CGREF1-206ENST00000405600 SLC27A3Q5K4L6 730 aa22.09■■□□□ 1.13
CGREF1-206ENST00000405600 CCNL1Q9UK58 526 aaPredicted RBP22.09■■□□□ 1.13
CGREF1-206ENST00000405600 IGSF1Q8N6C5 1336 aa22.09■■□□□ 1.13
CGREF1-206ENST00000405600 TFCP2L1Q9NZI6 479 aa22.08■■□□□ 1.13
CGREF1-206ENST00000405600 CASZ1Q86V15 1759 aa22.08■■□□□ 1.12
CGREF1-206ENST00000405600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.07■■□□□ 1.12
CGREF1-206ENST00000405600 MSH5O43196 834 aa22.06■■□□□ 1.12
CGREF1-206ENST00000405600 MTFR1LQ9H019 292 aa22.05■■□□□ 1.12
CGREF1-206ENST00000405600 NUDCQ9Y266 331 aa22.05■■□□□ 1.12
CGREF1-206ENST00000405600 IL13P35225 146 aa22.04■■□□□ 1.12
CGREF1-206ENST00000405600 AKT1S1Q96B36 256 aa22.04■■□□□ 1.12
CGREF1-206ENST00000405600 DCAF8L1A6NGE4 600 aa22.03■■□□□ 1.12
CGREF1-206ENST00000405600 IFNL2Q8IZJ0 200 aa22.03■■□□□ 1.12
CGREF1-206ENST00000405600 ADAMTS8Q9UP79 889 aa22.03■■□□□ 1.12
CGREF1-206ENST00000405600 PAPPAQ13219 1627 aa22.02■■□□□ 1.12
CGREF1-206ENST00000405600 DIAPH1O60610 1272 aaKnown RBP22.02■■□□□ 1.12
CGREF1-206ENST00000405600 PTGER2P43116 358 aa22.02■■□□□ 1.12
CGREF1-206ENST00000405600 PKD1L3Q7Z443 1732 aa22.01■■□□□ 1.11
CGREF1-206ENST00000405600 LY75O60449 1722 aa22.01■■□□□ 1.11
CGREF1-206ENST00000405600 PHKG2P15735 406 aa22■■□□□ 1.11
CGREF1-206ENST00000405600 KLHL34Q8N239 644 aa22■■□□□ 1.11
CGREF1-206ENST00000405600 NGEFQ8N5V2 710 aa22■■□□□ 1.11
CGREF1-206ENST00000405600 PIGBQ92521 554 aa22■■□□□ 1.11
CGREF1-206ENST00000405600 TMOD3Q9NYL9 352 aa22■■□□□ 1.11
CGREF1-206ENST00000405600 KDRP35968 1356 aa21.99■■□□□ 1.11
CGREF1-206ENST00000405600 PALLDQ8WX93 1383 aa21.99■■□□□ 1.11
CGREF1-206ENST00000405600 AMOTQ4VCS5 1084 aa21.99■■□□□ 1.11
CGREF1-206ENST00000405600 SULT6B1Q6IMI4 303 aa21.99■■□□□ 1.11
CGREF1-206ENST00000405600 ITGB4P16144 1822 aa21.98■■□□□ 1.11
CGREF1-206ENST00000405600 PNPLA7Q6ZV29 1317 aa21.98■■□□□ 1.11
CGREF1-206ENST00000405600 NKX1-1Q15270 411 aaPredicted RBP21.98■■□□□ 1.11
CGREF1-206ENST00000405600 PLEKHO1Q53GL0 409 aaPredicted RBP21.98■■□□□ 1.11
CGREF1-206ENST00000405600 AEBP1Q8IUX7 1158 aa21.98■■□□□ 1.11
CGREF1-206ENST00000405600 SMARCC1Q92922 1105 aaPredicted RBP21.98■■□□□ 1.11
CGREF1-206ENST00000405600 TOGARAM1Q9Y4F4 1720 aa21.98■■□□□ 1.11
CGREF1-206ENST00000405600 PNNQ9H307 717 aaKnown RBP21.97■■□□□ 1.11
CGREF1-206ENST00000405600 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms