RNA–Protein interactions for RNA: ENST00000405570.5

CTNNB1-204, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTNNB1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-204ENST00000405570 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
CTNNB1-204ENST00000405570 CBX1P83916 185 aa12.22□□□□□ -0.45
CTNNB1-204ENST00000405570 DNTTIP2Q5QJE6 756 aaKnown RBP12.22□□□□□ -0.45
CTNNB1-204ENST00000405570 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
CTNNB1-204ENST00000405570 QRICH2Q9H0J4 1663 aa12.22□□□□□ -0.45
CTNNB1-204ENST00000405570 GTF2F1P35269 517 aaKnown RBP eCLIP12.21□□□□□ -0.452e-18■■■■■ 80.7
CTNNB1-204ENST00000405570 BRPF1P55201 1214 aaPredicted RBP12.21□□□□□ -0.45
CTNNB1-204ENST00000405570 FGD1P98174 961 aa12.21□□□□□ -0.45
CTNNB1-204ENST00000405570 ALKQ9UM73 1620 aa12.21□□□□□ -0.45
CTNNB1-204ENST00000405570 EVC2Q86UK5 1308 aa12.21□□□□□ -0.45
CTNNB1-204ENST00000405570 ST18O60284 1047 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 MBD3O95983 291 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 HMGN5P82970 282 aaKnown RBP12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 ATP2B3Q16720 1220 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 WAPLQ7Z5K2 1190 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 GTPBP4Q9BZE4 634 aaKnown RBP12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 PTPRMP28827 1452 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 TTC22Q5TAA0 569 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 MPNDQ8N594 471 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 PIBF1Q8WXW3 757 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 TSPY26PQ9H489 355 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 NSD2O96028 1365 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 PIK3R4Q99570 1358 aa12.2□□□□□ -0.46
CTNNB1-204ENST00000405570 ZNF830Q96NB3 372 aaPredicted RBP12.19□□□□□ -0.46
CTNNB1-204ENST00000405570 ARHGEF28Q8N1W1 1705 aaKnown RBP12.19□□□□□ -0.46
CTNNB1-204ENST00000405570 TULP4Q9NRJ4 1543 aa12.19□□□□□ -0.46
CTNNB1-204ENST00000405570 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
CTNNB1-204ENST00000405570 NOLC1Q14978 699 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■□□□ 12.1
CTNNB1-204ENST00000405570 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
CTNNB1-204ENST00000405570 FAM177BA6PVY3 158 aa12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 INTS3Q68E01 1043 aaKnown RBP12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 ARHGAP45Q92619 1136 aa12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 CFAP44Q96MT7 982 aa12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 KIF20AO95235 890 aa12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 ZNF428Q96B54 188 aa12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 METP08581 1390 aa12.18□□□□□ -0.46
CTNNB1-204ENST00000405570 LTKP29376 864 aa12.17□□□□□ -0.46
CTNNB1-204ENST00000405570 C17orf53Q8N3J3 647 aaPredicted RBP12.17□□□□□ -0.46
CTNNB1-204ENST00000405570 ANKRD36BQ8N2N9 1353 aa12.17□□□□□ -0.46
CTNNB1-204ENST00000405570 COL3A1P02461 1466 aaPredicted RBP12.17□□□□□ -0.46
CTNNB1-204ENST00000405570 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
CTNNB1-204ENST00000405570 TMEM2Q9UHN6 1383 aa12.17□□□□□ -0.46
CTNNB1-204ENST00000405570 PTCH1Q13635 1447 aa12.17□□□□□ -0.46
CTNNB1-204ENST00000405570 VAMP4O75379 141 aa12.16□□□□□ -0.46
CTNNB1-204ENST00000405570 ABCC4O15439 1325 aa12.16□□□□□ -0.46
CTNNB1-204ENST00000405570 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
CTNNB1-204ENST00000405570 BRD1O95696 1058 aa12.16□□□□□ -0.46
CTNNB1-204ENST00000405570 TXNDC2Q86VQ3 553 aa12.16□□□□□ -0.46
CTNNB1-204ENST00000405570 OTUD7AQ8TE49 926 aaPredicted RBP12.16□□□□□ -0.46
CTNNB1-204ENST00000405570 TTC12Q9H892 705 aaPredicted RBP12.16□□□□□ -0.46
CTNNB1-204ENST00000405570 SDSP20132 328 aa12.15□□□□□ -0.46
CTNNB1-204ENST00000405570 TSPYL6Q8N831 410 aa12.15□□□□□ -0.46
CTNNB1-204ENST00000405570 CDK19Q9BWU1 502 aa12.15□□□□□ -0.46
CTNNB1-204ENST00000405570 DCTPP1Q9H773 170 aa12.15□□□□□ -0.46
CTNNB1-204ENST00000405570 BCL2L12Q9HB09 334 aa12.15□□□□□ -0.46
CTNNB1-204ENST00000405570 SPTLC3Q9NUV7 552 aa12.15□□□□□ -0.46
CTNNB1-204ENST00000405570 FKBP5Q13451 457 aaPredicted RBP12.15□□□□□ -0.46
CTNNB1-204ENST00000405570 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.47
CTNNB1-204ENST00000405570 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
CTNNB1-204ENST00000405570 SYAP1Q96A49 352 aaPredicted RBP12.14□□□□□ -0.47
CTNNB1-204ENST00000405570 TMX3Q96JJ7 454 aa12.14□□□□□ -0.47
CTNNB1-204ENST00000405570 GGNBP2Q9H3C7 697 aa12.14□□□□□ -0.47
CTNNB1-204ENST00000405570 USP25Q9UHP3 1055 aa12.14□□□□□ -0.47
CTNNB1-204ENST00000405570 SPDYE4A6NLX3 237 aa12.14□□□□□ -0.47
CTNNB1-204ENST00000405570 PUS7Q96PZ0 661 aaKnown RBP12.14□□□□□ -0.47
CTNNB1-204ENST00000405570 UVSSAQ2YD98 709 aa12.13□□□□□ -0.47
CTNNB1-204ENST00000405570 NRXN3Q9Y4C0 1643 aa12.13□□□□□ -0.47
CTNNB1-204ENST00000405570 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
CTNNB1-204ENST00000405570 CASC1Q6TDU7 716 aa12.13□□□□□ -0.47
CTNNB1-204ENST00000405570 FAM184AQ8NB25 1140 aa12.13□□□□□ -0.47
CTNNB1-204ENST00000405570 ELL2O00472 640 aaPredicted RBP12.12□□□□□ -0.47
CTNNB1-204ENST00000405570 REC8O95072 547 aa12.12□□□□□ -0.47
CTNNB1-204ENST00000405570 ADCY5O95622 1261 aa12.12□□□□□ -0.47
CTNNB1-204ENST00000405570 PDCL2Q8N4E4 241 aa12.12□□□□□ -0.47
CTNNB1-204ENST00000405570 SLC26A8Q96RN1 970 aa12.12□□□□□ -0.47
CTNNB1-204ENST00000405570 DIAPH1O60610 1272 aaKnown RBP12.12□□□□□ -0.47
CTNNB1-204ENST00000405570 PHF14O94880 888 aa12.12□□□□□ -0.47
CTNNB1-204ENST00000405570 NEK4P51957 841 aa12.12□□□□□ -0.47
CTNNB1-204ENST00000405570 UBR1Q8IWV7 1749 aa12.11□□□□□ -0.47
CTNNB1-204ENST00000405570 THUMPD2Q9BTF0 503 aaKnown RBP12.11□□□□□ -0.47
CTNNB1-204ENST00000405570 GDPD2Q9HCC8 539 aa12.11□□□□□ -0.47
CTNNB1-204ENST00000405570 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
CTNNB1-204ENST00000405570 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
CTNNB1-204ENST00000405570 A0A1W2PP64 1363 aa12.11□□□□□ -0.47
CTNNB1-204ENST00000405570 C3P01024 1663 aa12.11□□□□□ -0.47
CTNNB1-204ENST00000405570 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
CTNNB1-204ENST00000405570 ERC2O15083 957 aa12.1□□□□□ -0.47
CTNNB1-204ENST00000405570 CUL4AQ13619 759 aa12.1□□□□□ -0.47
CTNNB1-204ENST00000405570 FOXD4L6Q3SYB3 417 aaPredicted RBP12.1□□□□□ -0.47
CTNNB1-204ENST00000405570 FOXD4L3Q6VB84 417 aaPredicted RBP12.1□□□□□ -0.47
CTNNB1-204ENST00000405570 SMARCA5O60264 1052 aaPredicted RBP12.1□□□□□ -0.47
CTNNB1-204ENST00000405570 FCHSD2O94868 740 aa12.1□□□□□ -0.47
CTNNB1-204ENST00000405570 U2AF2P26368 475 aaKnown RBP eCLIP12.1□□□□□ -0.473e-9■□□□□ 10.3
CTNNB1-204ENST00000405570 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms