RNA–Protein interactions for RNA: ENST00000402412.5

R3HDM2-204, Transcript of R3H domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,372 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-204ENST00000402412 CCDC34Q96HJ3 373 aa16.55■□□□□ 0.24
R3HDM2-204ENST00000402412 NUCB2P80303 420 aa16.54■□□□□ 0.24
R3HDM2-204ENST00000402412 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
R3HDM2-204ENST00000402412 F6X3S4 739 aa16.54■□□□□ 0.24
R3HDM2-204ENST00000402412 FERMT3Q86UX7 667 aa16.54■□□□□ 0.24
R3HDM2-204ENST00000402412 SKIDA1Q1XH10 827 aa16.53■□□□□ 0.24
R3HDM2-204ENST00000402412 KLHL34Q8N239 644 aa16.53■□□□□ 0.24
R3HDM2-204ENST00000402412 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
R3HDM2-204ENST00000402412 KIF1BO60333 1816 aa16.52■□□□□ 0.24
R3HDM2-204ENST00000402412 C14orf93Q9H972 538 aaKnown RBP16.52■□□□□ 0.24
R3HDM2-204ENST00000402412 SASS6Q6UVJ0 657 aa16.52■□□□□ 0.23
R3HDM2-204ENST00000402412 RALYLQ86SE5 291 aaKnown RBP16.52■□□□□ 0.23
R3HDM2-204ENST00000402412 PATL2C9JE40 543 aaKnown RBP16.52■□□□□ 0.23
R3HDM2-204ENST00000402412 TRIM29Q14134 588 aa16.52■□□□□ 0.23
R3HDM2-204ENST00000402412 RNF20Q5VTR2 975 aa16.52■□□□□ 0.23
R3HDM2-204ENST00000402412 SSH1Q8WYL5 1049 aa16.52■□□□□ 0.23
R3HDM2-204ENST00000402412 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
R3HDM2-204ENST00000402412 COL17A1Q9UMD9 1497 aaPredicted RBP16.51■□□□□ 0.23
R3HDM2-204ENST00000402412 PODXL2Q9NZ53 605 aa16.51■□□□□ 0.23
R3HDM2-204ENST00000402412 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
R3HDM2-204ENST00000402412 AGLP35573 1532 aa16.51■□□□□ 0.23
R3HDM2-204ENST00000402412 PDE3AQ14432 1141 aa16.5■□□□□ 0.23
R3HDM2-204ENST00000402412 TRIM5Q9C035 493 aa16.5■□□□□ 0.23
R3HDM2-204ENST00000402412 CWC27Q6UX04 472 aaKnown RBP16.5■□□□□ 0.23
R3HDM2-204ENST00000402412 CAMSAP1Q5T5Y3 1602 aa16.5■□□□□ 0.23
R3HDM2-204ENST00000402412 ZMYM3Q14202 1370 aa16.5■□□□□ 0.23
R3HDM2-204ENST00000402412 PDILTQ8N807 584 aa16.5■□□□□ 0.23
R3HDM2-204ENST00000402412 DNAJC5Q9H3Z4 198 aa16.5■□□□□ 0.23
R3HDM2-204ENST00000402412 BRPF1P55201 1214 aaPredicted RBP16.49■□□□□ 0.23
R3HDM2-204ENST00000402412 MVPQ14764 893 aaKnown RBP16.49■□□□□ 0.23
R3HDM2-204ENST00000402412 MYOM2P54296 1465 aa16.49■□□□□ 0.23
R3HDM2-204ENST00000402412 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
R3HDM2-204ENST00000402412 CCDC73Q6ZRK6 1079 aa16.49■□□□□ 0.23
R3HDM2-204ENST00000402412 ZNF771Q7L3S4 317 aaPredicted RBP16.49■□□□□ 0.23
R3HDM2-204ENST00000402412 PIBF1Q8WXW3 757 aa16.48■□□□□ 0.23
R3HDM2-204ENST00000402412 TESK2Q96S53 571 aa16.48■□□□□ 0.23
R3HDM2-204ENST00000402412 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
R3HDM2-204ENST00000402412 ERC2O15083 957 aa16.48■□□□□ 0.23
R3HDM2-204ENST00000402412 MRE11P49959 708 aa16.48■□□□□ 0.23
R3HDM2-204ENST00000402412 ZNF530Q6P9A1 599 aaPredicted RBP16.48■□□□□ 0.23
R3HDM2-204ENST00000402412 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
R3HDM2-204ENST00000402412 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 ATF3P18847 181 aa16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 CHD1LQ86WJ1 897 aa16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 FAM177A1Q8N128 213 aaPredicted RBP16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 ZC3H13Q5T200 1668 aaKnown RBP16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 GDPD2Q9HCC8 539 aa16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 ARHGEF40Q8TER5 1519 aa16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 GNAI2P04899 355 aa16.47■□□□□ 0.23
R3HDM2-204ENST00000402412 ANXA1P04083 346 aa16.46■□□□□ 0.23
R3HDM2-204ENST00000402412 TSR1Q2NL82 804 aaKnown RBP16.46■□□□□ 0.23
R3HDM2-204ENST00000402412 CCDC30Q5VVM6 783 aa16.46■□□□□ 0.23
R3HDM2-204ENST00000402412 DDX11Q96FC9 970 aa16.46■□□□□ 0.23
R3HDM2-204ENST00000402412 TNRQ92752 1358 aa16.46■□□□□ 0.23
R3HDM2-204ENST00000402412 DISP3Q9P2K9 1392 aa16.46■□□□□ 0.23
R3HDM2-204ENST00000402412 GNAI3P08754 354 aa16.46■□□□□ 0.23
R3HDM2-204ENST00000402412 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 NME9Q86XW9 330 aa16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 ERVK-7P63135 1459 aa16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 FAM83GA6ND36 823 aa16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 GOLGA6L1Q8N7Z2 621 aa16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 JARID2Q92833 1246 aaPredicted RBP16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 KAT6BQ8WYB5 2073 aa16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 PRM3Q9NNZ6 103 aa16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 BCORL1Q5H9F3 1711 aa16.45■□□□□ 0.22
R3HDM2-204ENST00000402412 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
R3HDM2-204ENST00000402412 ADGRB3O60242 1522 aa16.44■□□□□ 0.22
R3HDM2-204ENST00000402412 MCM4P33991 863 aa16.44■□□□□ 0.22
R3HDM2-204ENST00000402412 CNTROBQ8N137 903 aa16.44■□□□□ 0.22
R3HDM2-204ENST00000402412 MADDQ8WXG6 1647 aa16.43■□□□□ 0.22
R3HDM2-204ENST00000402412 REREQ9P2R6 1566 aa16.43■□□□□ 0.22
R3HDM2-204ENST00000402412 CEBPAP49715 358 aaPredicted RBP16.42■□□□□ 0.22
R3HDM2-204ENST00000402412 NEURL4Q96JN8 1562 aa16.42■□□□□ 0.22
R3HDM2-204ENST00000402412 IGHDP01880 384 aa16.42■□□□□ 0.22
R3HDM2-204ENST00000402412 CCDC82Q8N4S0 544 aa16.42■□□□□ 0.22
R3HDM2-204ENST00000402412 CEP89Q96ST8 783 aa16.42■□□□□ 0.22
R3HDM2-204ENST00000402412 NUTM2BA6NNL0 878 aaPredicted RBP16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 NUTM2EB1AL46 878 aaPredicted RBP16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 RARSP54136 660 aaKnown RBP16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 NAP1L1P55209 391 aaKnown RBP16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 NUTM2AQ8IVF1 878 aaPredicted RBP16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 SRCIN1Q9C0H9 1055 aa16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 DTNBO60941 627 aa16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 HSP90AB4PQ58FF6 505 aa16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 FILIP1Q7Z7B0 1213 aa16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 AACSQ86V21 672 aa16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 LRRCC1Q9C099 1032 aa16.41■□□□□ 0.22
R3HDM2-204ENST00000402412 SMC2O95347 1197 aa16.4■□□□□ 0.22
R3HDM2-204ENST00000402412 CAMK4Q16566 473 aa16.4■□□□□ 0.22
R3HDM2-204ENST00000402412 RIMS2Q9UQ26 1411 aa16.39■□□□□ 0.21
R3HDM2-204ENST00000402412 ERICH2A1L162 156 aa16.39■□□□□ 0.21
R3HDM2-204ENST00000402412 K7ELQ4 463 aaPredicted RBP16.39■□□□□ 0.21
R3HDM2-204ENST00000402412 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
R3HDM2-204ENST00000402412 JAKMIP1Q96N16 626 aaKnown RBP16.39■□□□□ 0.21
R3HDM2-204ENST00000402412 SYCE3A1L190 88 aa16.39■□□□□ 0.21
R3HDM2-204ENST00000402412 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms