RNA–Protein interactions for RNA: ENST00000400248.6

DEPDC5-205, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene DEPDC5, Length 5,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-205ENST00000400248 NUP160Q12769 1436 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 ATP10BO94823 1461 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 SRGAP3O43295 1099 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 KDM4AO75164 1064 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 MAP3K11Q16584 847 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 CWC27Q6UX04 472 aaKnown RBP11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 LEKR1Q6ZMV7 388 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 CEP57L1Q8IYX8 460 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 CFAP45Q9UL16 551 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 RPGRIP1LQ68CZ1 1315 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 GPRASP1Q5JY77 1395 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 NLRP2Q9NX02 1062 aa11.73□□□□□ -0.53
DEPDC5-205ENST00000400248 XPCQ01831 940 aaPredicted RBP11.72□□□□□ -0.53
DEPDC5-205ENST00000400248 FILIP1Q7Z7B0 1213 aa11.72□□□□□ -0.53
DEPDC5-205ENST00000400248 EXOC6BQ9Y2D4 811 aa11.72□□□□□ -0.53
DEPDC5-205ENST00000400248 PDCL3Q9H2J4 239 aa11.72□□□□□ -0.53
DEPDC5-205ENST00000400248 TBC1D2BQ9UPU7 963 aa11.72□□□□□ -0.53
DEPDC5-205ENST00000400248 CCDC183Q5T5S1 534 aa11.71□□□□□ -0.53
DEPDC5-205ENST00000400248 UPF3BQ9BZI7 483 aaKnown RBP11.71□□□□□ -0.53
DEPDC5-205ENST00000400248 TARBP1Q13395 1621 aaKnown RBP11.71□□□□□ -0.53
DEPDC5-205ENST00000400248 TRIM27P14373 513 aa11.71□□□□□ -0.53
DEPDC5-205ENST00000400248 ABTB2Q8N961 1025 aa11.71□□□□□ -0.53
DEPDC5-205ENST00000400248 THUMPD2Q9BTF0 503 aaKnown RBP11.71□□□□□ -0.54
DEPDC5-205ENST00000400248 H0YHG0 523 aa11.71□□□□□ -0.54
DEPDC5-205ENST00000400248 MX1P20591 662 aa11.71□□□□□ -0.54
DEPDC5-205ENST00000400248 AACSQ86V21 672 aa11.71□□□□□ -0.54
DEPDC5-205ENST00000400248 TXNDC2Q86VQ3 553 aa11.71□□□□□ -0.54
DEPDC5-205ENST00000400248 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 CCAR1Q8IX12 1150 aaKnown RBP11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 CBFA2T2O43439 604 aa11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 SMARCA5O60264 1052 aaPredicted RBP11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 CASTP20810 708 aaKnown RBP11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 PIP4K2AP48426 406 aaPredicted RBP11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 BMP2KLQ5H9B9 411 aa11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 SIL1Q9H173 461 aa11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 KRT32Q14532 448 aa11.7□□□□□ -0.54
DEPDC5-205ENST00000400248 OFD1O75665 1012 aa11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 RTEL1-TNFRSF6BF6WH68 1400 aa11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 RRS1Q15050 365 aaKnown RBP11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 PPFIBP1Q86W92 1011 aa11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 RALGAPBQ86X10 1494 aa11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 RAD21O60216 631 aa11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 BAG4O95429 457 aaKnown RBP11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 MCM5P33992 734 aa11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 DACH1Q9UI36 760 aa11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 DHX29Q7Z478 1369 aaKnown RBP11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 PLEKHH1Q9ULM0 1364 aa11.69□□□□□ -0.54
DEPDC5-205ENST00000400248 KLHL40Q2TBA0 621 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 TBC1D9Q6ZT07 1266 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 FERMT3Q86UX7 667 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 DISP1Q96F81 1524 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 ERLIN1O75477 346 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 AXDND1Q5T1B0 1012 aaPredicted RBP11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 CCDC83Q8IWF9 413 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 FAM177A1Q8N128 213 aaPredicted RBP11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 ADGRL1O94910 1474 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 CD109Q6YHK3 1445 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 CAMK4Q16566 473 aa11.68□□□□□ -0.54
DEPDC5-205ENST00000400248 CLCN1P35523 988 aa11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 MAGEC2Q9UBF1 373 aaPredicted RBP11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 KIF2AO00139 706 aaPredicted RBP11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 SYTL4Q96C24 671 aaPredicted RBP11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 FYB1O15117 783 aa11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 XRCC6P12956 609 aaKnown RBP eCLIP11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 TXLNAP40222 546 aa11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 KIF1BPQ96EK5 621 aa11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 USP25Q9UHP3 1055 aa11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 SCAND2PQ9GZW5 306 aaPredicted RBP11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 EIF3JO75822 258 aaKnown RBP11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 C8orf34Q49A92 452 aa11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 TTC39AQ5SRH9 613 aa11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 UBXN4Q92575 508 aa11.67□□□□□ -0.54
DEPDC5-205ENST00000400248 SMTNL1A8MU46 457 aa11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 GLRX3O76003 335 aaKnown RBP11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 PTPN14Q15678 1187 aa11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 PLCH2O75038 1416 aa11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 RAB11FIP3O75154 756 aa11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 EPS15P42566 896 aa11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 CBX1P83916 185 aa11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 RRP12Q5JTH9 1297 aaKnown RBP11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 ZNF530Q6P9A1 599 aaPredicted RBP11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 TRIM22Q8IYM9 498 aa11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 ZNHIT6Q9NWK9 470 aaKnown RBP11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.66□□□□□ -0.549e-7■■■■■ 35.3
DEPDC5-205ENST00000400248 SH2B1Q9NRF2 756 aaPredicted RBP11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 DISP3Q9P2K9 1392 aa11.66□□□□□ -0.54
DEPDC5-205ENST00000400248 SHANK2Q9UPX8 1470 aa11.65□□□□□ -0.54
DEPDC5-205ENST00000400248 PRPF40BQ6NWY9 871 aaKnown RBP11.65□□□□□ -0.54
DEPDC5-205ENST00000400248 PRDM10Q9NQV6 1147 aa11.65□□□□□ -0.54
DEPDC5-205ENST00000400248 TAF3Q5VWG9 929 aa11.65□□□□□ -0.54
DEPDC5-205ENST00000400248 DDX11Q96FC9 970 aa11.65□□□□□ -0.54
DEPDC5-205ENST00000400248 HDAC1Q13547 482 aaPredicted RBP11.65□□□□□ -0.55
DEPDC5-205ENST00000400248 RDXP35241 583 aaKnown RBP11.64□□□□□ -0.55
DEPDC5-205ENST00000400248 LIMCH1Q9UPQ0 1083 aa11.64□□□□□ -0.55
DEPDC5-205ENST00000400248 MCM10Q7L590 875 aa11.64□□□□□ -0.55
DEPDC5-205ENST00000400248 CTNNA3Q9UI47 895 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms