RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 HIP1O00291 1037 aa17.38■□□□□ 0.37
GABPA-202ENST00000400075 HYPKQ9NX55 129 aa17.38■□□□□ 0.37
GABPA-202ENST00000400075 PPIP5K1Q6PFW1 1433 aa17.38■□□□□ 0.37
GABPA-202ENST00000400075 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
GABPA-202ENST00000400075 C1orf115Q9H7X2 142 aa17.37■□□□□ 0.37
GABPA-202ENST00000400075 FOXD4L5Q5VV16 416 aaPredicted RBP17.37■□□□□ 0.37
GABPA-202ENST00000400075 FOXD4L4Q8WXT5 416 aaPredicted RBP17.37■□□□□ 0.37
GABPA-202ENST00000400075 STK32BQ9NY57 414 aa17.37■□□□□ 0.37
GABPA-202ENST00000400075 CNKSR2Q8WXI2 1034 aa17.37■□□□□ 0.37
GABPA-202ENST00000400075 XBP1P17861 261 aa17.36■□□□□ 0.37
GABPA-202ENST00000400075 L1TD1Q5T7N2 865 aaKnown RBP17.36■□□□□ 0.37
GABPA-202ENST00000400075 PTMSP20962 102 aa17.36■□□□□ 0.37
GABPA-202ENST00000400075 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
GABPA-202ENST00000400075 NSD2O96028 1365 aa17.36■□□□□ 0.37
GABPA-202ENST00000400075 CCDC47Q96A33 483 aaKnown RBP17.36■□□□□ 0.37
GABPA-202ENST00000400075 BAG6P46379 1132 aa17.35■□□□□ 0.37
GABPA-202ENST00000400075 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
GABPA-202ENST00000400075 CDC5LQ99459 802 aaKnown RBP17.35■□□□□ 0.37
GABPA-202ENST00000400075 RTCBQ9Y3I0 505 aaKnown RBP17.35■□□□□ 0.37
GABPA-202ENST00000400075 FBLN1P23142 703 aa17.34■□□□□ 0.37
GABPA-202ENST00000400075 BRMS1Q9HCU9 246 aa17.34■□□□□ 0.37
GABPA-202ENST00000400075 IFT57Q9NWB7 429 aa17.34■□□□□ 0.37
GABPA-202ENST00000400075 PES1O00541 588 aaKnown RBP17.34■□□□□ 0.37
GABPA-202ENST00000400075 IDH1O75874 414 aaKnown RBP17.33■□□□□ 0.37
GABPA-202ENST00000400075 AKAP2Q9Y2D5 859 aa17.33■□□□□ 0.37
GABPA-202ENST00000400075 TPD52L1Q16890 204 aaPredicted RBP17.33■□□□□ 0.36
GABPA-202ENST00000400075 AACSQ86V21 672 aa17.33■□□□□ 0.36
GABPA-202ENST00000400075 LRRCC1Q9C099 1032 aa17.33■□□□□ 0.36
GABPA-202ENST00000400075 CTTNBP2Q8WZ74 1663 aa17.33■□□□□ 0.36
GABPA-202ENST00000400075 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.36
GABPA-202ENST00000400075 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
GABPA-202ENST00000400075 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
GABPA-202ENST00000400075 FAM98CQ17RN3 349 aaKnown RBP17.32■□□□□ 0.36
GABPA-202ENST00000400075 CEP89Q96ST8 783 aa17.32■□□□□ 0.36
GABPA-202ENST00000400075 ZFYVE16Q7Z3T8 1539 aa17.32■□□□□ 0.36
GABPA-202ENST00000400075 PDE3AQ14432 1141 aa17.32■□□□□ 0.36
GABPA-202ENST00000400075 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
GABPA-202ENST00000400075 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
GABPA-202ENST00000400075 PSMA5P28066 241 aa17.31■□□□□ 0.36
GABPA-202ENST00000400075 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
GABPA-202ENST00000400075 CRACR2BQ8N4Y2 399 aaPredicted RBP17.31■□□□□ 0.36
GABPA-202ENST00000400075 STK11IPQ8N1F8 1099 aa17.31■□□□□ 0.36
GABPA-202ENST00000400075 DNAAF4Q8WXU2 420 aa17.31■□□□□ 0.36
GABPA-202ENST00000400075 TMEM2Q9UHN6 1383 aa17.3■□□□□ 0.36
GABPA-202ENST00000400075 TRPM2O94759 1503 aa17.3■□□□□ 0.36
GABPA-202ENST00000400075 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
GABPA-202ENST00000400075 ANKRD36BQ8N2N9 1353 aa17.3■□□□□ 0.36
GABPA-202ENST00000400075 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
GABPA-202ENST00000400075 TDO2P48775 406 aa17.3■□□□□ 0.36
GABPA-202ENST00000400075 FOXD4L6Q3SYB3 417 aaPredicted RBP17.3■□□□□ 0.36
GABPA-202ENST00000400075 FOXD4L3Q6VB84 417 aaPredicted RBP17.3■□□□□ 0.36
GABPA-202ENST00000400075 DZIP1Q86YF9 867 aaKnown RBP17.3■□□□□ 0.36
GABPA-202ENST00000400075 GCC1Q96CN9 775 aa17.3■□□□□ 0.36
GABPA-202ENST00000400075 NLRP3Q96P20 1036 aa17.29■□□□□ 0.36
GABPA-202ENST00000400075 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
GABPA-202ENST00000400075 BCAR3O75815 825 aa17.29■□□□□ 0.36
GABPA-202ENST00000400075 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
GABPA-202ENST00000400075 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
GABPA-202ENST00000400075 CDC45O75419 566 aa17.28■□□□□ 0.36
GABPA-202ENST00000400075 LTKP29376 864 aa17.28■□□□□ 0.36
GABPA-202ENST00000400075 C16orf71Q8IYS4 520 aaPredicted RBP17.28■□□□□ 0.36
GABPA-202ENST00000400075 SLC39A6Q13433 755 aa17.28■□□□□ 0.36
GABPA-202ENST00000400075 SLF2Q8IX21 1173 aa17.28■□□□□ 0.36
GABPA-202ENST00000400075 CWC25Q9NXE8 425 aaPredicted RBP17.27■□□□□ 0.36
GABPA-202ENST00000400075 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.36
GABPA-202ENST00000400075 ATP5J2-PTCD1G3V325 749 aa17.27■□□□□ 0.36
GABPA-202ENST00000400075 AKAP4Q5JQC9 854 aa17.27■□□□□ 0.36
GABPA-202ENST00000400075 ARHGEF10O15013 1369 aa17.27■□□□□ 0.36
GABPA-202ENST00000400075 SLC5A1P13866 664 aa17.27■□□□□ 0.35
GABPA-202ENST00000400075 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.35
GABPA-202ENST00000400075 IL1RAPL2Q9NP60 686 aa17.27■□□□□ 0.35
GABPA-202ENST00000400075 ZRANB1Q9UGI0 708 aa17.27■□□□□ 0.35
GABPA-202ENST00000400075 SMC3Q9UQE7 1217 aa17.27■□□□□ 0.35
GABPA-202ENST00000400075 USP5P45974 858 aa17.26■□□□□ 0.35
GABPA-202ENST00000400075 FLT4P35916 1363 aa17.26■□□□□ 0.35
GABPA-202ENST00000400075 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
GABPA-202ENST00000400075 VPS37CA5D8V6 355 aaPredicted RBP17.26■□□□□ 0.35
GABPA-202ENST00000400075 RPAP2Q8IXW5 612 aaPredicted RBP17.26■□□□□ 0.35
GABPA-202ENST00000400075 DDX17Q92841 729 aaKnown RBP17.26■□□□□ 0.35
GABPA-202ENST00000400075 SIRT1Q96EB6 747 aa17.26■□□□□ 0.35
GABPA-202ENST00000400075 ZNF287Q9HBT7 754 aa17.26■□□□□ 0.35
GABPA-202ENST00000400075 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
GABPA-202ENST00000400075 AIDAQ96BJ3 306 aa17.26■□□□□ 0.35
GABPA-202ENST00000400075 CCNL1Q9UK58 526 aaPredicted RBP17.26■□□□□ 0.35
GABPA-202ENST00000400075 APBA3O96018 575 aa17.25■□□□□ 0.35
GABPA-202ENST00000400075 ANKRD13DQ6ZTN6 518 aa17.25■□□□□ 0.35
GABPA-202ENST00000400075 IP6K1Q92551 441 aa17.25■□□□□ 0.35
GABPA-202ENST00000400075 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
GABPA-202ENST00000400075 POLR3DP05423 398 aaPredicted RBP17.25■□□□□ 0.35
GABPA-202ENST00000400075 FOSBP53539 338 aa17.24■□□□□ 0.35
GABPA-202ENST00000400075 JDP2Q8WYK2 163 aa17.24■□□□□ 0.35
GABPA-202ENST00000400075 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
GABPA-202ENST00000400075 PUS7Q96PZ0 661 aaKnown RBP17.24■□□□□ 0.35
GABPA-202ENST00000400075 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
GABPA-202ENST00000400075 TMEM94Q12767 1356 aa17.24■□□□□ 0.35
GABPA-202ENST00000400075 TRAPPC3LQ5T215 181 aa17.24■□□□□ 0.35
GABPA-202ENST00000400075 WDR78Q5VTH9 848 aa17.24■□□□□ 0.35
GABPA-202ENST00000400075 MPHOSPH10O00566 681 aaKnown RBP17.23■□□□□ 0.35
GABPA-202ENST00000400075 GNPATO15228 680 aa17.23■□□□□ 0.35
GABPA-202ENST00000400075 TPM2P07951 284 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms