RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
SCAF4-202ENST00000399804 PPRC1Q5VV67 1664 aaKnown RBP17.2■□□□□ 0.34
SCAF4-202ENST00000399804 MRPL50Q8N5N7 158 aaKnown RBP17.2■□□□□ 0.34
SCAF4-202ENST00000399804 DIP2CQ9Y2E4 1556 aa17.19■□□□□ 0.34
SCAF4-202ENST00000399804 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
SCAF4-202ENST00000399804 ARHGAP45Q92619 1136 aa17.19■□□□□ 0.34
SCAF4-202ENST00000399804 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.19■□□□□ 0.34
SCAF4-202ENST00000399804 ADGRB3O60242 1522 aa17.19■□□□□ 0.34
SCAF4-202ENST00000399804 ANO8Q9HCE9 1232 aaPredicted RBP17.19■□□□□ 0.34
SCAF4-202ENST00000399804 NUTM2BA6NNL0 878 aaPredicted RBP17.19■□□□□ 0.34
SCAF4-202ENST00000399804 NUTM2EB1AL46 878 aaPredicted RBP17.19■□□□□ 0.34
SCAF4-202ENST00000399804 NUTM2AQ8IVF1 878 aaPredicted RBP17.19■□□□□ 0.34
SCAF4-202ENST00000399804 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
SCAF4-202ENST00000399804 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
SCAF4-202ENST00000399804 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
SCAF4-202ENST00000399804 LRRCC1Q9C099 1032 aa17.19■□□□□ 0.34
SCAF4-202ENST00000399804 NPHP3Q7Z494 1330 aa17.19■□□□□ 0.34
SCAF4-202ENST00000399804 MSH6P52701 1360 aa17.18■□□□□ 0.34
SCAF4-202ENST00000399804 PTCD1O75127 700 aaKnown RBP17.18■□□□□ 0.34
SCAF4-202ENST00000399804 ANXA1P04083 346 aa17.18■□□□□ 0.34
SCAF4-202ENST00000399804 PTPRCP08575 1304 aa17.17■□□□□ 0.34
SCAF4-202ENST00000399804 IL1RAPL2Q9NP60 686 aa17.17■□□□□ 0.34
SCAF4-202ENST00000399804 IP6K1Q92551 441 aa17.17■□□□□ 0.34
SCAF4-202ENST00000399804 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
SCAF4-202ENST00000399804 RUFY2Q8WXA3 655 aa17.17■□□□□ 0.34
SCAF4-202ENST00000399804 ERC2O15083 957 aa17.16■□□□□ 0.34
SCAF4-202ENST00000399804 SMARCA5O60264 1052 aaPredicted RBP17.16■□□□□ 0.34
SCAF4-202ENST00000399804 FOXD4L5Q5VV16 416 aaPredicted RBP17.16■□□□□ 0.34
SCAF4-202ENST00000399804 FOXD4L4Q8WXT5 416 aaPredicted RBP17.16■□□□□ 0.34
SCAF4-202ENST00000399804 ABCA6Q8N139 1617 aa17.15■□□□□ 0.34
SCAF4-202ENST00000399804 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
SCAF4-202ENST00000399804 TRIM44Q96DX7 344 aaPredicted RBP17.15■□□□□ 0.34
SCAF4-202ENST00000399804 NEUROD6Q96NK8 337 aa17.15■□□□□ 0.34
SCAF4-202ENST00000399804 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
SCAF4-202ENST00000399804 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.33
SCAF4-202ENST00000399804 SIL1Q9H173 461 aa17.14■□□□□ 0.33
SCAF4-202ENST00000399804 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
SCAF4-202ENST00000399804 MEIS3Q99687 375 aa17.14■□□□□ 0.33
SCAF4-202ENST00000399804 NLRP1Q9C000 1473 aa17.13■□□□□ 0.33
SCAF4-202ENST00000399804 HTATSF1O43719 755 aaKnown RBP17.13■□□□□ 0.33
SCAF4-202ENST00000399804 TRMT2AQ8IZ69 625 aaKnown RBP17.13■□□□□ 0.33
SCAF4-202ENST00000399804 DNAAF4Q8WXU2 420 aa17.13■□□□□ 0.33
SCAF4-202ENST00000399804 HDAC1Q13547 482 aaPredicted RBP17.13■□□□□ 0.33
SCAF4-202ENST00000399804 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
SCAF4-202ENST00000399804 LRRFIP2Q9Y608 721 aaKnown RBP17.13■□□□□ 0.33
SCAF4-202ENST00000399804 PI4KAP2A4QPH2 592 aa17.12■□□□□ 0.33
SCAF4-202ENST00000399804 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
SCAF4-202ENST00000399804 PI4KAP1Q8N8J0 262 aa17.12■□□□□ 0.33
SCAF4-202ENST00000399804 GOLGA6L4A6NEF3 574 aa17.12■□□□□ 0.33
SCAF4-202ENST00000399804 CHMP5Q9NZZ3 219 aa17.12■□□□□ 0.33
SCAF4-202ENST00000399804 FAM135BQ49AJ0 1406 aa17.11■□□□□ 0.33
SCAF4-202ENST00000399804 DDX17Q92841 729 aaKnown RBP17.11■□□□□ 0.33
SCAF4-202ENST00000399804 ZBTB40Q9NUA8 1239 aa17.11■□□□□ 0.33
SCAF4-202ENST00000399804 GLI2P10070 1586 aa17.11■□□□□ 0.33
SCAF4-202ENST00000399804 AKAP4Q5JQC9 854 aa17.11■□□□□ 0.33
SCAF4-202ENST00000399804 CHL1O00533 1208 aa17.1■□□□□ 0.33
SCAF4-202ENST00000399804 ATP7BP35670 1465 aa17.1■□□□□ 0.33
SCAF4-202ENST00000399804 ZKSCAN1P17029 563 aaPredicted RBP17.1■□□□□ 0.33
SCAF4-202ENST00000399804 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
SCAF4-202ENST00000399804 CNTROBQ8N137 903 aa17.1■□□□□ 0.33
SCAF4-202ENST00000399804 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
SCAF4-202ENST00000399804 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
SCAF4-202ENST00000399804 ADAMTS2O95450 1211 aa17.1■□□□□ 0.33
SCAF4-202ENST00000399804 NFKBIBQ15653 356 aa17.1■□□□□ 0.33
SCAF4-202ENST00000399804 CAMSAP1Q5T5Y3 1602 aa17.09■□□□□ 0.33
SCAF4-202ENST00000399804 MAP4K4O95819 1239 aaPredicted RBP17.09■□□□□ 0.33
SCAF4-202ENST00000399804 HSP90B1P14625 803 aaKnown RBP17.09■□□□□ 0.33
SCAF4-202ENST00000399804 CHPF2Q9P2E5 772 aa17.09■□□□□ 0.33
SCAF4-202ENST00000399804 NBPF6Q5VWK0 638 aa17.08■□□□□ 0.33
SCAF4-202ENST00000399804 ERC1Q8IUD2 1116 aa17.08■□□□□ 0.33
SCAF4-202ENST00000399804 NBPF4Q96M43 638 aa17.08■□□□□ 0.33
SCAF4-202ENST00000399804 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.32
SCAF4-202ENST00000399804 FOXD4L6Q3SYB3 417 aaPredicted RBP17.08■□□□□ 0.32
SCAF4-202ENST00000399804 LARP1Q6PKG0 1096 aaKnown RBP17.08■□□□□ 0.32
SCAF4-202ENST00000399804 FOXD4L3Q6VB84 417 aaPredicted RBP17.08■□□□□ 0.32
SCAF4-202ENST00000399804 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.32
SCAF4-202ENST00000399804 KIF6Q6ZMV9 814 aa17.07■□□□□ 0.32
SCAF4-202ENST00000399804 NUTM1Q86Y26 1132 aa17.07■□□□□ 0.32
SCAF4-202ENST00000399804 AATKQ6ZMQ8 1374 aa17.07■□□□□ 0.32
SCAF4-202ENST00000399804 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
SCAF4-202ENST00000399804 PLCB2Q00722 1185 aa17.07■□□□□ 0.32
SCAF4-202ENST00000399804 HYPKQ9NX55 129 aa17.07■□□□□ 0.32
SCAF4-202ENST00000399804 FMNL2Q96PY5 1086 aa17.06■□□□□ 0.32
SCAF4-202ENST00000399804 FSD1Q9BTV5 496 aa17.06■□□□□ 0.32
SCAF4-202ENST00000399804 NEK4P51957 841 aa17.06■□□□□ 0.32
SCAF4-202ENST00000399804 MYD88Q99836 296 aa17.06■□□□□ 0.32
SCAF4-202ENST00000399804 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
SCAF4-202ENST00000399804 PIK3R4Q99570 1358 aa17.06■□□□□ 0.32
SCAF4-202ENST00000399804 NUCB1Q02818 461 aa17.06■□□□□ 0.32
SCAF4-202ENST00000399804 G2E3Q7L622 706 aa17.06■□□□□ 0.32
SCAF4-202ENST00000399804 TMOD3Q9NYL9 352 aa17.06■□□□□ 0.32
SCAF4-202ENST00000399804 USP6P35125 1406 aa17.05■□□□□ 0.32
SCAF4-202ENST00000399804 SETBP1Q9Y6X0 1596 aa17.05■□□□□ 0.32
SCAF4-202ENST00000399804 L1TD1Q5T7N2 865 aaKnown RBP17.05■□□□□ 0.32
SCAF4-202ENST00000399804 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
SCAF4-202ENST00000399804 ZRSR1Q15695 479 aaKnown RBP17.05■□□□□ 0.32
SCAF4-202ENST00000399804 AACSQ86V21 672 aa17.05■□□□□ 0.32
SCAF4-202ENST00000399804 LGR6Q9HBX8 967 aa17.05■□□□□ 0.32
SCAF4-202ENST00000399804 PTMSP20962 102 aa17.04■□□□□ 0.32
SCAF4-202ENST00000399804 KIF1BPQ96EK5 621 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms