RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 PATL2C9JE40 543 aaKnown RBP9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 TMEM132EQ6IEE7 984 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 KCNH5Q8NCM2 988 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 SH2B1Q9NRF2 756 aaPredicted RBP9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 EIF2AK4Q9P2K8 1649 aaKnown RBP9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 USP8P40818 1118 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 AKAP2Q9Y2D5 859 aa9.85□□□□□ -0.83
SPTLC3-201ENST00000399002 KIAA0754O94854 1291 aa9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 LARP1BQ659C4 914 aaKnown RBP9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 TXNDC2Q86VQ3 553 aa9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 CDCA7LQ96GN5 454 aa9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 NESP48681 1621 aa9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 CYB5RLQ6IPT4 315 aa9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 ZNF287Q9HBT7 754 aa9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 CTAGE5O15320 804 aa9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 FIBPO43427 364 aa9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 ESCO1Q5FWF5 840 aa9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 BMP2KQ9NSY1 1161 aaPredicted RBP9.84□□□□□ -0.83
SPTLC3-201ENST00000399002 JAKMIP3Q5VZ66 844 aa9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 CCDC148Q8NFR7 591 aa9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 DEF6Q9H4E7 631 aa9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 ME1P48163 572 aa9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 IKQ13123 557 aaPredicted RBP9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 RNF214Q8ND24 703 aa9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 ZNF397Q8NF99 534 aaPredicted RBP9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 GNAT3A8MTJ3 354 aa9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 NEMFO60524 1076 aa9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 IMMTQ16891 758 aaKnown RBP9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 SCAF11Q99590 1463 aaKnown RBP9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 PTPRCP08575 1304 aa9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 AACSQ86V21 672 aa9.83□□□□□ -0.84
SPTLC3-201ENST00000399002 ZSCAN12O43309 604 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 SULT6B1Q6IMI4 303 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 MAP3K11Q16584 847 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 KIF1BPQ96EK5 621 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 PYM1Q9BRP8 204 aaKnown RBP9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 RALGAPBQ86X10 1494 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 ZFYVE27Q5T4F4 411 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 ZNF530Q6P9A1 599 aaPredicted RBP9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 CNKSR2Q8WXI2 1034 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 BTBD11A6QL63 1104 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 POTEB2H3BUK9 544 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 BCAR3O75815 825 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 MCM4P33991 863 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 CCDC183Q5T5S1 534 aa9.82□□□□□ -0.84
SPTLC3-201ENST00000399002 RRP9O43818 475 aaKnown RBP9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 UPF3BQ9BZI7 483 aaKnown RBP9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 CDK13Q14004 1512 aaKnown RBP9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 TRIM21P19474 475 aaKnown RBP9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 AXDND1Q5T1B0 1012 aaPredicted RBP9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 FGFR1OPO95684 399 aaKnown RBP9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 NBPF8Q3BBV2 869 aa9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 AMOTQ4VCS5 1084 aa9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 C1orf115Q9H7X2 142 aa9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 CABP1Q9NZU7 370 aa9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 IL16Q14005 1332 aa9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 GLRX3O76003 335 aaKnown RBP9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 TSR2Q969E8 191 aaKnown RBP9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 UBAC1Q9BSL1 405 aa9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 TSPYL1Q9H0U9 437 aa9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
SPTLC3-201ENST00000399002 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 MCM5P33992 734 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 SEPT7Q16181 437 aaKnown RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 MAP9Q49MG5 647 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 JAKMIP1Q96N16 626 aaKnown RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 U3KPZ7 1027 aaPredicted RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 PROSER2Q86WR7 435 aaPredicted RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 SCAND2PQ9GZW5 306 aaPredicted RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 ANO10Q9NW15 660 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 NUP160Q12769 1436 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 UQCRHLA0A096LP55 91 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 UQCRHP07919 91 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 GBP2P32456 591 aaPredicted RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 TMPOP42166 694 aaKnown RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 NBPF1Q3BBV0 1214 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 LRPPRCP42704 1394 aaKnown RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 CCDC196A0A1B0GTZ2 297 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 POTEJP0CG39 1038 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 TTC21BQ7Z4L5 1316 aa9.8□□□□□ -0.84
SPTLC3-201ENST00000399002 AFAP1Q8N556 730 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 TAF4BQ92750 862 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 MX1P20591 662 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 CCDC83Q8IWF9 413 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 MPHOSPH8Q99549 860 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 TSG101Q99816 390 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 ABCC5O15440 1437 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 IGHMBP2P38935 993 aaKnown RBP9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 ZSCAN30Q86W11 494 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 SRGAP3O43295 1099 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 EPB41L2O43491 1005 aaKnown RBP9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 CEP126Q9P2H0 1117 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 ANKRD36BQ8N2N9 1353 aa9.79□□□□□ -0.84
SPTLC3-201ENST00000399002 CAVIN2O95810 425 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 HSP90AB3PQ58FF7 597 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 ANKLE2Q86XL3 938 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 SPC24Q8NBT2 197 aa9.78□□□□□ -0.84
SPTLC3-201ENST00000399002 INCENPQ9NQS7 918 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms