RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 ADCY9O60503 1353 aa19.95■□□□□ 0.78
FAM3B-204ENST00000398652 FAM208AQ9UK61 1670 aaKnown RBP19.94■□□□□ 0.78
FAM3B-204ENST00000398652 KTN1Q86UP2 1357 aaKnown RBP19.92■□□□□ 0.78
FAM3B-204ENST00000398652 KCNQ4P56696 695 aa19.9■□□□□ 0.78
FAM3B-204ENST00000398652 USP31Q70CQ4 1352 aa19.9■□□□□ 0.78
FAM3B-204ENST00000398652 ANKRD24Q8TF21 1146 aa19.89■□□□□ 0.77
FAM3B-204ENST00000398652 ANKRD36BQ8N2N9 1353 aa19.88■□□□□ 0.77
FAM3B-204ENST00000398652 C5P01031 1676 aa19.87■□□□□ 0.77
FAM3B-204ENST00000398652 DDX54Q8TDD1 881 aaKnown RBP19.87■□□□□ 0.77
FAM3B-204ENST00000398652 ZNF526Q8TF50 670 aaPredicted RBP19.87■□□□□ 0.77
FAM3B-204ENST00000398652 NSD2O96028 1365 aa19.86■□□□□ 0.77
FAM3B-204ENST00000398652 COL23A1Q86Y22 540 aaPredicted RBP19.86■□□□□ 0.77
FAM3B-204ENST00000398652 SYTL4Q96C24 671 aaPredicted RBP19.86■□□□□ 0.77
FAM3B-204ENST00000398652 CD2APQ9Y5K6 639 aa19.86■□□□□ 0.77
FAM3B-204ENST00000398652 CCNL1Q9UK58 526 aaPredicted RBP19.85■□□□□ 0.77
FAM3B-204ENST00000398652 TAF1LQ8IZX4 1826 aa19.84■□□□□ 0.77
FAM3B-204ENST00000398652 PRIM1P49642 420 aaKnown RBP19.84■□□□□ 0.77
FAM3B-204ENST00000398652 MSL1Q68DK7 614 aa19.83■□□□□ 0.77
FAM3B-204ENST00000398652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.83■□□□□ 0.771e-6■■□□□ 14.2
FAM3B-204ENST00000398652 RGPD2P0DJD1 1756 aa19.81■□□□□ 0.76
FAM3B-204ENST00000398652 NME9Q86XW9 330 aa19.81■□□□□ 0.76
FAM3B-204ENST00000398652 SBNO2Q9Y2G9 1366 aa19.8■□□□□ 0.76
FAM3B-204ENST00000398652 CD163L1Q9NR16 1453 aa19.79■□□□□ 0.76
FAM3B-204ENST00000398652 KIF3CO14782 793 aa19.79■□□□□ 0.76
FAM3B-204ENST00000398652 USP47Q96K76 1375 aa19.79■□□□□ 0.76
FAM3B-204ENST00000398652 APLP1P51693 650 aa19.78■□□□□ 0.76
FAM3B-204ENST00000398652 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
FAM3B-204ENST00000398652 FLAD1Q8NFF5 587 aa19.75■□□□□ 0.75
FAM3B-204ENST00000398652 IP6K1Q92551 441 aa19.75■□□□□ 0.75
FAM3B-204ENST00000398652 TOGARAM1Q9Y4F4 1720 aa19.75■□□□□ 0.75
FAM3B-204ENST00000398652 UBR3Q6ZT12 1888 aa19.75■□□□□ 0.75
FAM3B-204ENST00000398652 IGSF1Q8N6C5 1336 aa19.75■□□□□ 0.75
FAM3B-204ENST00000398652 WDR90Q96KV7 1748 aa19.74■□□□□ 0.75
FAM3B-204ENST00000398652 ZCRB1Q8TBF4 217 aaKnown RBP19.74■□□□□ 0.75
FAM3B-204ENST00000398652 LTV1Q96GA3 475 aaPredicted RBP19.74■□□□□ 0.75
FAM3B-204ENST00000398652 MEGF6O75095 1541 aa19.74■□□□□ 0.75
FAM3B-204ENST00000398652 EDC4Q6P2E9 1401 aaKnown RBP19.74■□□□□ 0.75
FAM3B-204ENST00000398652 C4BP0C0L5 1744 aa19.73■□□□□ 0.75
FAM3B-204ENST00000398652 HMGB2P26583 209 aaKnown RBP19.73■□□□□ 0.75
FAM3B-204ENST00000398652 ROCK2O75116 1388 aaKnown RBP19.72■□□□□ 0.75
FAM3B-204ENST00000398652 DNAJC5GQ8N7S2 189 aa19.72■□□□□ 0.75
FAM3B-204ENST00000398652 HDGFL2Q7Z4V5 671 aaPredicted RBP19.7■□□□□ 0.74
FAM3B-204ENST00000398652 WWC3Q9ULE0 1092 aa19.7■□□□□ 0.74
FAM3B-204ENST00000398652 ITGB4P16144 1822 aa19.69■□□□□ 0.74
FAM3B-204ENST00000398652 TOMM70O94826 608 aa19.69■□□□□ 0.74
FAM3B-204ENST00000398652 L3MBTL2Q969R5 705 aa19.69■□□□□ 0.74
FAM3B-204ENST00000398652 KIF13BQ9NQT8 1826 aa19.68■□□□□ 0.74
FAM3B-204ENST00000398652 PALLDQ8WX93 1383 aa19.68■□□□□ 0.74
FAM3B-204ENST00000398652 TMC1Q8TDI8 760 aa19.67■□□□□ 0.74
FAM3B-204ENST00000398652 A0A1W2PP64 1363 aa19.67■□□□□ 0.74
FAM3B-204ENST00000398652 KIAA1551Q9HCM1 1747 aa19.66■□□□□ 0.74
FAM3B-204ENST00000398652 HOXC9P31274 260 aa19.66■□□□□ 0.74
FAM3B-204ENST00000398652 CGNL1Q0VF96 1302 aa19.66■□□□□ 0.74
FAM3B-204ENST00000398652 NSD3Q9BZ95 1437 aa19.66■□□□□ 0.74
FAM3B-204ENST00000398652 AK7Q96M32 723 aa19.65■□□□□ 0.74
FAM3B-204ENST00000398652 MAP3K19Q56UN5 1328 aa19.65■□□□□ 0.74
FAM3B-204ENST00000398652 SLC12A5Q9H2X9 1139 aa19.64■□□□□ 0.73
FAM3B-204ENST00000398652 TERF2IPQ9NYB0 399 aa19.64■□□□□ 0.73
FAM3B-204ENST00000398652 N4BP2Q86UW6 1770 aaPredicted RBP19.64■□□□□ 0.73
FAM3B-204ENST00000398652 AMIGO3Q86WK7 504 aa19.63■□□□□ 0.73
FAM3B-204ENST00000398652 MAP2P11137 1827 aaKnown RBP19.62■□□□□ 0.73
FAM3B-204ENST00000398652 MYCNP04198 464 aaPredicted RBP19.62■□□□□ 0.73
FAM3B-204ENST00000398652 AMPHP49418 695 aa19.62■□□□□ 0.73
FAM3B-204ENST00000398652 COL13A1Q5TAT6 717 aaPredicted RBP19.62■□□□□ 0.73
FAM3B-204ENST00000398652 RTL1A6NKG5 1358 aa19.61■□□□□ 0.73
FAM3B-204ENST00000398652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.61■□□□□ 0.73
FAM3B-204ENST00000398652 PHF14O94880 888 aa19.61■□□□□ 0.73
FAM3B-204ENST00000398652 BRCA1P38398 1863 aaKnown RBP19.6■□□□□ 0.73
FAM3B-204ENST00000398652 PCDH11XQ9BZA7 1347 aa19.6■□□□□ 0.73
FAM3B-204ENST00000398652 PCDH11YQ9BZA8 1340 aa19.6■□□□□ 0.73
FAM3B-204ENST00000398652 MPRIPQ6WCQ1 1025 aa19.6■□□□□ 0.73
FAM3B-204ENST00000398652 RAPGEF4Q8WZA2 1011 aa19.6■□□□□ 0.73
FAM3B-204ENST00000398652 PXDNLA1KZ92 1463 aa19.6■□□□□ 0.73
FAM3B-204ENST00000398652 SSFA2P28290 1259 aa19.59■□□□□ 0.73
FAM3B-204ENST00000398652 NBPF6Q5VWK0 638 aa19.59■□□□□ 0.73
FAM3B-204ENST00000398652 JMYQ8N9B5 988 aa19.59■□□□□ 0.73
FAM3B-204ENST00000398652 SMARCC1Q92922 1105 aaPredicted RBP19.59■□□□□ 0.73
FAM3B-204ENST00000398652 KLRG1Q96E93 195 aa19.59■□□□□ 0.73
FAM3B-204ENST00000398652 NBPF4Q96M43 638 aa19.59■□□□□ 0.73
FAM3B-204ENST00000398652 NMRK2Q9NPI5 230 aa19.59■□□□□ 0.73
FAM3B-204ENST00000398652 CAPN15O75808 1086 aa19.58■□□□□ 0.72
FAM3B-204ENST00000398652 RBM46Q8TBY0 533 aaKnown RBP19.58■□□□□ 0.72
FAM3B-204ENST00000398652 COG3Q96JB2 828 aa19.58■□□□□ 0.72
FAM3B-204ENST00000398652 PKD1L3Q7Z443 1732 aa19.58■□□□□ 0.72
FAM3B-204ENST00000398652 SMG6Q86US8 1419 aaKnown RBP19.58■□□□□ 0.72
FAM3B-204ENST00000398652 TATP17735 454 aaPredicted RBP19.57■□□□□ 0.72
FAM3B-204ENST00000398652 SMIM5Q71RC9 77 aa19.57■□□□□ 0.72
FAM3B-204ENST00000398652 USHBP1Q8N6Y0 703 aa19.57■□□□□ 0.72
FAM3B-204ENST00000398652 ARFGEF1Q9Y6D6 1849 aa19.57■□□□□ 0.72
FAM3B-204ENST00000398652 FBLN1P23142 703 aa19.55■□□□□ 0.72
FAM3B-204ENST00000398652 TNS4Q8IZW8 715 aa19.55■□□□□ 0.72
FAM3B-204ENST00000398652 PRELPP51888 382 aa19.54■□□□□ 0.72
FAM3B-204ENST00000398652 HTRA3P83110 453 aa19.54■□□□□ 0.72
FAM3B-204ENST00000398652 PUS7Q96PZ0 661 aaKnown RBP19.54■□□□□ 0.72
FAM3B-204ENST00000398652 BCS1LQ9Y276 419 aa19.54■□□□□ 0.72
FAM3B-204ENST00000398652 TGFB2P61812 414 aa19.53■□□□□ 0.72
FAM3B-204ENST00000398652 FSTL1Q12841 308 aa19.53■□□□□ 0.72
FAM3B-204ENST00000398652 POTEDQ86YR6 584 aa19.53■□□□□ 0.72
FAM3B-204ENST00000398652 PLEKHG2Q9H7P9 1386 aa19.53■□□□□ 0.72
FAM3B-204ENST00000398652 TNRC6CQ9HCJ0 1690 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms