RNA–Protein interactions for RNA: ENST00000398646.3

FAM3B-202, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 5 BASIC

Gene FAM3B, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-202ENST00000398646 DCTN1Q14203 1278 aa12.68□□□□□ -0.38
FAM3B-202ENST00000398646 IFT57Q9NWB7 429 aa12.68□□□□□ -0.38
FAM3B-202ENST00000398646 AHDC1Q5TGY3 1603 aaPredicted RBP12.68□□□□□ -0.38
FAM3B-202ENST00000398646 COL18A1P39060 1754 aa12.67□□□□□ -0.38
FAM3B-202ENST00000398646 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
FAM3B-202ENST00000398646 HTATSF1O43719 755 aaKnown RBP12.67□□□□□ -0.38
FAM3B-202ENST00000398646 CT47B1P0C2W7 299 aaPredicted RBP12.67□□□□□ -0.38
FAM3B-202ENST00000398646 EXOSC9Q06265 439 aaKnown RBP12.67□□□□□ -0.38
FAM3B-202ENST00000398646 PLEKHO1Q53GL0 409 aaPredicted RBP12.67□□□□□ -0.38
FAM3B-202ENST00000398646 PRDM11Q9NQV5 511 aa12.67□□□□□ -0.38
FAM3B-202ENST00000398646 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
FAM3B-202ENST00000398646 RGPD2P0DJD1 1756 aa12.66□□□□□ -0.38
FAM3B-202ENST00000398646 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
FAM3B-202ENST00000398646 PLIN1O60240 522 aa12.66□□□□□ -0.38
FAM3B-202ENST00000398646 ZNF853P0CG23 659 aa12.66□□□□□ -0.38
FAM3B-202ENST00000398646 PIP4K2BP78356 416 aa12.66□□□□□ -0.38
FAM3B-202ENST00000398646 MCM10Q7L590 875 aa12.66□□□□□ -0.38
FAM3B-202ENST00000398646 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
FAM3B-202ENST00000398646 UBAP1LF5GYI3 381 aa12.65□□□□□ -0.38
FAM3B-202ENST00000398646 AMOTQ4VCS5 1084 aa12.65□□□□□ -0.38
FAM3B-202ENST00000398646 CFAP44Q96MT7 982 aa12.65□□□□□ -0.38
FAM3B-202ENST00000398646 CAMTA1Q9Y6Y1 1673 aa12.64□□□□□ -0.39
FAM3B-202ENST00000398646 BCAR3O75815 825 aa12.64□□□□□ -0.39
FAM3B-202ENST00000398646 RARSP54136 660 aaKnown RBP12.64□□□□□ -0.39
FAM3B-202ENST00000398646 PPP4R2Q9NY27 417 aa12.64□□□□□ -0.39
FAM3B-202ENST00000398646 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
FAM3B-202ENST00000398646 MAP3K5Q99683 1374 aa12.64□□□□□ -0.39
FAM3B-202ENST00000398646 TATP17735 454 aaPredicted RBP12.63□□□□□ -0.39
FAM3B-202ENST00000398646 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
FAM3B-202ENST00000398646 RAPGEF4Q8WZA2 1011 aa12.63□□□□□ -0.39
FAM3B-202ENST00000398646 MBIPQ9NS73 344 aa12.63□□□□□ -0.39
FAM3B-202ENST00000398646 PHLPP1O60346 1717 aa12.62□□□□□ -0.39
FAM3B-202ENST00000398646 FAM208AQ9UK61 1670 aaKnown RBP12.62□□□□□ -0.39
FAM3B-202ENST00000398646 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
FAM3B-202ENST00000398646 AKAP4Q5JQC9 854 aa12.62□□□□□ -0.39
FAM3B-202ENST00000398646 CRB1P82279 1406 aa12.62□□□□□ -0.39
FAM3B-202ENST00000398646 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
FAM3B-202ENST00000398646 CHL1O00533 1208 aa12.61□□□□□ -0.39
FAM3B-202ENST00000398646 EVA1CP58658 441 aa12.61□□□□□ -0.39
FAM3B-202ENST00000398646 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
FAM3B-202ENST00000398646 WDR17Q8IZU2 1322 aa12.61□□□□□ -0.39
FAM3B-202ENST00000398646 TOM1L2Q6ZVM7 507 aa12.6□□□□□ -0.39
FAM3B-202ENST00000398646 EXOC6Q8TAG9 804 aa12.6□□□□□ -0.39
FAM3B-202ENST00000398646 FRAT1Q92837 279 aaPredicted RBP12.6□□□□□ -0.39
FAM3B-202ENST00000398646 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
FAM3B-202ENST00000398646 ALDH1L2Q3SY69 923 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 IL17REQ8NFR9 667 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 ZNF428Q96B54 188 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 CRBNQ96SW2 442 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 BCL2L13Q9BXK5 485 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 STRN4Q9NRL3 753 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 SMC4Q9NTJ3 1288 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 TSPYL4Q9UJ04 414 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 SPG7Q9UQ90 795 aa12.59□□□□□ -0.39
FAM3B-202ENST00000398646 COL16A1Q07092 1604 aaPredicted RBP12.59□□□□□ -0.39
FAM3B-202ENST00000398646 VAMP4O75379 141 aa12.58□□□□□ -0.4
FAM3B-202ENST00000398646 TAF7Q15545 349 aaPredicted RBP12.58□□□□□ -0.4
FAM3B-202ENST00000398646 TWISTNBQ3B726 338 aaPredicted RBP12.58□□□□□ -0.4
FAM3B-202ENST00000398646 C20orf194Q5TEA3 1177 aa12.58□□□□□ -0.4
FAM3B-202ENST00000398646 COL5A2P05997 1499 aaPredicted RBP12.58□□□□□ -0.4
FAM3B-202ENST00000398646 PLEKHG2Q9H7P9 1386 aa12.57□□□□□ -0.4
FAM3B-202ENST00000398646 ELL2O00472 640 aaPredicted RBP12.57□□□□□ -0.4
FAM3B-202ENST00000398646 RNMTO43148 476 aaKnown RBP12.57□□□□□ -0.4
FAM3B-202ENST00000398646 TSPYL6Q8N831 410 aa12.57□□□□□ -0.4
FAM3B-202ENST00000398646 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
FAM3B-202ENST00000398646 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
FAM3B-202ENST00000398646 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
FAM3B-202ENST00000398646 BABAM1Q9NWV8 329 aa12.57□□□□□ -0.4
FAM3B-202ENST00000398646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.57□□□□□ -0.47e-6■■□□□ 12.8
FAM3B-202ENST00000398646 MIS18AQ9NYP9 233 aa12.57□□□□□ -0.4
FAM3B-202ENST00000398646 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
FAM3B-202ENST00000398646 MS4A1P11836 297 aa12.56□□□□□ -0.4
FAM3B-202ENST00000398646 TEFQ10587 303 aa12.56□□□□□ -0.4
FAM3B-202ENST00000398646 PDE3AQ14432 1141 aa12.56□□□□□ -0.4
FAM3B-202ENST00000398646 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
FAM3B-202ENST00000398646 LARP1Q6PKG0 1096 aaKnown RBP12.56□□□□□ -0.4
FAM3B-202ENST00000398646 MPRIPQ6WCQ1 1025 aa12.56□□□□□ -0.4
FAM3B-202ENST00000398646 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
FAM3B-202ENST00000398646 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
FAM3B-202ENST00000398646 MEGF6O75095 1541 aa12.56□□□□□ -0.4
FAM3B-202ENST00000398646 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
FAM3B-202ENST00000398646 B4GALNT3Q6L9W6 998 aa12.55□□□□□ -0.4
FAM3B-202ENST00000398646 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
FAM3B-202ENST00000398646 CCDC136Q96JN2 1154 aa12.55□□□□□ -0.4
FAM3B-202ENST00000398646 KIF16BQ96L93 1317 aa12.55□□□□□ -0.4
FAM3B-202ENST00000398646 CEMIPQ8WUJ3 1361 aa12.55□□□□□ -0.4
FAM3B-202ENST00000398646 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
FAM3B-202ENST00000398646 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
FAM3B-202ENST00000398646 IPO8O15397 1037 aaKnown RBP12.54□□□□□ -0.4
FAM3B-202ENST00000398646 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
FAM3B-202ENST00000398646 PHKG2P15735 406 aa12.54□□□□□ -0.4
FAM3B-202ENST00000398646 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
FAM3B-202ENST00000398646 PELP1Q8IZL8 1130 aaKnown RBP12.54□□□□□ -0.4
FAM3B-202ENST00000398646 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
FAM3B-202ENST00000398646 ZNF219Q9P2Y4 722 aaPredicted RBP12.54□□□□□ -0.4
FAM3B-202ENST00000398646 NOB1Q9ULX3 412 aaKnown RBP12.54□□□□□ -0.4
FAM3B-202ENST00000398646 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
FAM3B-202ENST00000398646 IL2RBP14784 551 aa12.53□□□□□ -0.4
FAM3B-202ENST00000398646 BRPF1P55201 1214 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms