RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 USP6P35125 1406 aa10.24□□□□□ -0.77
PTPRD-204ENST00000397606 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
PTPRD-204ENST00000397606 LAMC1P11047 1609 aa10.24□□□□□ -0.77
PTPRD-204ENST00000397606 ADGRL3Q9HAR2 1447 aa10.24□□□□□ -0.77
PTPRD-204ENST00000397606 GNAI2P04899 355 aa10.24□□□□□ -0.77
PTPRD-204ENST00000397606 IFIT2P09913 472 aaKnown RBP10.23□□□□□ -0.77
PTPRD-204ENST00000397606 MTHFSDQ2M296 383 aaKnown RBP10.23□□□□□ -0.77
PTPRD-204ENST00000397606 PIK3C2BO00750 1634 aa10.23□□□□□ -0.77
PTPRD-204ENST00000397606 DEPDC5O75140 1603 aa10.23□□□□□ -0.77
PTPRD-204ENST00000397606 DBF4Q9UBU7 674 aaPredicted RBP10.23□□□□□ -0.77
PTPRD-204ENST00000397606 NEXMIFQ5QGS0 1516 aa10.23□□□□□ -0.77
PTPRD-204ENST00000397606 PREX1Q8TCU6 1659 aa10.23□□□□□ -0.77
PTPRD-204ENST00000397606 RARSP54136 660 aaKnown RBP10.23□□□□□ -0.77
PTPRD-204ENST00000397606 RSPH6AQ9H0K4 717 aa10.23□□□□□ -0.77
PTPRD-204ENST00000397606 RIMS1Q86UR5 1692 aaKnown RBP10.23□□□□□ -0.77
PTPRD-204ENST00000397606 LRRFIP1Q32MZ4 808 aaKnown RBP10.22□□□□□ -0.77
PTPRD-204ENST00000397606 SSH1Q8WYL5 1049 aa10.22□□□□□ -0.77
PTPRD-204ENST00000397606 MBIPQ9NS73 344 aa10.22□□□□□ -0.77
PTPRD-204ENST00000397606 MVPQ14764 893 aaKnown RBP10.22□□□□□ -0.77
PTPRD-204ENST00000397606 AATKQ6ZMQ8 1374 aa10.22□□□□□ -0.77
PTPRD-204ENST00000397606 DCAF5Q96JK2 942 aa10.22□□□□□ -0.77
PTPRD-204ENST00000397606 HYPKQ9NX55 129 aa10.22□□□□□ -0.77
PTPRD-204ENST00000397606 PTCH1Q13635 1447 aa10.21□□□□□ -0.77
PTPRD-204ENST00000397606 MAP3K5Q99683 1374 aa10.21□□□□□ -0.78
PTPRD-204ENST00000397606 CEP170BQ9Y4F5 1589 aaPredicted RBP10.21□□□□□ -0.78
PTPRD-204ENST00000397606 PCDH11XQ9BZA7 1347 aa10.21□□□□□ -0.78
PTPRD-204ENST00000397606 PCDH11YQ9BZA8 1340 aa10.21□□□□□ -0.78
PTPRD-204ENST00000397606 SNRPA1P09661 255 aaKnown RBP10.21□□□□□ -0.78
PTPRD-204ENST00000397606 PHACTR3Q96KR7 559 aa10.21□□□□□ -0.78
PTPRD-204ENST00000397606 LARP1Q6PKG0 1096 aaKnown RBP10.21□□□□□ -0.78
PTPRD-204ENST00000397606 FAM177BA6PVY3 158 aa10.2□□□□□ -0.78
PTPRD-204ENST00000397606 ZNF652Q9Y2D9 606 aa10.2□□□□□ -0.78
PTPRD-204ENST00000397606 SETD1BQ9UPS6 1966 aaKnown RBP10.2□□□□□ -0.78
PTPRD-204ENST00000397606 SURF6O75683 361 aaKnown RBP10.19□□□□□ -0.78
PTPRD-204ENST00000397606 ADAMTS13Q76LX8 1427 aa10.19□□□□□ -0.78
PTPRD-204ENST00000397606 BRINP3Q76B58 766 aa10.19□□□□□ -0.78
PTPRD-204ENST00000397606 HSCBQ8IWL3 235 aa10.19□□□□□ -0.78
PTPRD-204ENST00000397606 SMARCC1Q92922 1105 aaPredicted RBP10.19□□□□□ -0.78
PTPRD-204ENST00000397606 RILPL2Q969X0 211 aa10.19□□□□□ -0.78
PTPRD-204ENST00000397606 INSRP06213 1382 aa10.19□□□□□ -0.78
PTPRD-204ENST00000397606 VPS37DQ86XT2 251 aa10.19□□□□□ -0.78
PTPRD-204ENST00000397606 CLASRPQ8N2M8 674 aaKnown RBP10.19□□□□□ -0.78
PTPRD-204ENST00000397606 PTPRCP08575 1304 aa10.19□□□□□ -0.78
PTPRD-204ENST00000397606 ERC2O15083 957 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 ERC1Q8IUD2 1116 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 GCC1Q96CN9 775 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 DLC1Q96QB1 1528 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 NAP1L2Q9ULW6 460 aaPredicted RBP10.18□□□□□ -0.78
PTPRD-204ENST00000397606 HSP90AB3PQ58FF7 597 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 NBPF6Q5VWK0 638 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 NBPF4Q96M43 638 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 FER1L4A9Z1Z3 1794 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 KIF24Q5T7B8 1368 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 MFAP1P55081 439 aaKnown RBP10.18□□□□□ -0.78
PTPRD-204ENST00000397606 ARHGEF25Q86VW2 580 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 LNPKQ9C0E8 428 aa10.18□□□□□ -0.78
PTPRD-204ENST00000397606 GOLGA6L22H0YM25 854 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 FLIIQ13045 1269 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 NCBP3Q53F19 620 aaKnown RBP10.17□□□□□ -0.78
PTPRD-204ENST00000397606 NEURL4Q96JN8 1562 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 RTL1A6NKG5 1358 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 TULP4Q9NRJ4 1543 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 RPAP2Q8IXW5 612 aaPredicted RBP10.17□□□□□ -0.78
PTPRD-204ENST00000397606 TMEM57Q8N5G2 664 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 RUFY2Q8WXA3 655 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 ZPR1O75312 459 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 DIAPH3Q9NSV4 1193 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 BABAM1Q9NWV8 329 aa10.17□□□□□ -0.78
PTPRD-204ENST00000397606 RNMTO43148 476 aaKnown RBP10.16□□□□□ -0.78
PTPRD-204ENST00000397606 NFATC2IPQ8NCF5 419 aa10.16□□□□□ -0.78
PTPRD-204ENST00000397606 DNAAF4Q8WXU2 420 aa10.16□□□□□ -0.78
PTPRD-204ENST00000397606 C1orf115Q9H7X2 142 aa10.16□□□□□ -0.78
PTPRD-204ENST00000397606 NRXN1Q9ULB1 1477 aa10.16□□□□□ -0.78
PTPRD-204ENST00000397606 NEUROD6Q96NK8 337 aa10.16□□□□□ -0.78
PTPRD-204ENST00000397606 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
PTPRD-204ENST00000397606 MROH1Q8NDA8 1641 aa10.16□□□□□ -0.78
PTPRD-204ENST00000397606 SOS1Q07889 1333 aaPredicted RBP10.16□□□□□ -0.78
PTPRD-204ENST00000397606 NCLP19338 710 aaKnown RBP10.16□□□□□ -0.78
PTPRD-204ENST00000397606 KIAA0232Q92628 1395 aa10.15□□□□□ -0.78
PTPRD-204ENST00000397606 SPATA31A3Q5VYP0 1347 aa10.15□□□□□ -0.78
PTPRD-204ENST00000397606 CCDC57Q2TAC2 916 aa10.15□□□□□ -0.78
PTPRD-204ENST00000397606 USP21Q9UK80 565 aa10.15□□□□□ -0.78
PTPRD-204ENST00000397606 SLC39A6Q13433 755 aa10.15□□□□□ -0.78
PTPRD-204ENST00000397606 ACSBG1Q96GR2 724 aa10.15□□□□□ -0.78
PTPRD-204ENST00000397606 ARHGAP45Q92619 1136 aa10.15□□□□□ -0.79
PTPRD-204ENST00000397606 KDM4FA0A1W2PPD8 638 aa10.14□□□□□ -0.79
PTPRD-204ENST00000397606 SRGAP3O43295 1099 aa10.14□□□□□ -0.79
PTPRD-204ENST00000397606 MYD88Q99836 296 aa10.14□□□□□ -0.79
PTPRD-204ENST00000397606 CNNM1Q9NRU3 951 aa10.14□□□□□ -0.79
PTPRD-204ENST00000397606 TMEM131LA2VDJ0 1609 aa10.14□□□□□ -0.79
PTPRD-204ENST00000397606 A0A087WZG4 1122 aa10.14□□□□□ -0.79
PTPRD-204ENST00000397606 NOL10Q9BSC4 688 aaKnown RBP10.14□□□□□ -0.79
PTPRD-204ENST00000397606 KLHL34Q8N239 644 aa10.14□□□□□ -0.79
PTPRD-204ENST00000397606 AK7Q96M32 723 aa10.14□□□□□ -0.79
PTPRD-204ENST00000397606 TECPR2O15040 1411 aa10.13□□□□□ -0.79
PTPRD-204ENST00000397606 REC8O95072 547 aa10.13□□□□□ -0.79
PTPRD-204ENST00000397606 TRIM27P14373 513 aa10.13□□□□□ -0.79
PTPRD-204ENST00000397606 MPHOSPH8Q99549 860 aa10.13□□□□□ -0.79
PTPRD-204ENST00000397606 QRICH2Q9H0J4 1663 aa10.13□□□□□ -0.79
PTPRD-204ENST00000397606 C8orf58Q8NAV2 365 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms