RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ZNF428Q96B54 188 aa7.86□□□□□ -1.15
GABPB1-204ENST00000396464 HMX1Q9NP08 348 aaPredicted RBP7.86□□□□□ -1.15
GABPB1-204ENST00000396464 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
GABPB1-204ENST00000396464 SV2AQ7L0J3 742 aa7.86□□□□□ -1.15
GABPB1-204ENST00000396464 FOXD4L4Q8WXT5 416 aaPredicted RBP7.86□□□□□ -1.15
GABPB1-204ENST00000396464 OCSTAMPQ9BR26 566 aa7.86□□□□□ -1.15
GABPB1-204ENST00000396464 COL25A1Q9BXS0 654 aaPredicted RBP7.86□□□□□ -1.15
GABPB1-204ENST00000396464 ERVH48-1M5A8F1 160 aa7.85□□□□□ -1.15
GABPB1-204ENST00000396464 ADH1AP07327 375 aa7.85□□□□□ -1.15
GABPB1-204ENST00000396464 ITGA6P23229 1130 aa7.85□□□□□ -1.15
GABPB1-204ENST00000396464 TMEM259Q4ZIN3 620 aa7.85□□□□□ -1.15
GABPB1-204ENST00000396464 VWA5B2Q8N398 1253 aa7.85□□□□□ -1.15
GABPB1-204ENST00000396464 GPR161Q8N6U8 529 aaKnown RBP7.85□□□□□ -1.15
GABPB1-204ENST00000396464 NANOS1Q8WY41 292 aaKnown RBP7.85□□□□□ -1.15
GABPB1-204ENST00000396464 SLC35F4A4IF30 521 aa7.84□□□□□ -1.15
GABPB1-204ENST00000396464 TRAK2O60296 914 aa7.84□□□□□ -1.15
GABPB1-204ENST00000396464 MFAP1P55081 439 aaKnown RBP7.84□□□□□ -1.15
GABPB1-204ENST00000396464 A6NJR5 290 aa7.83□□□□□ -1.16
GABPB1-204ENST00000396464 RNF225M0QZC1 329 aaPredicted RBP7.83□□□□□ -1.16
GABPB1-204ENST00000396464 PTGIRP43119 386 aa7.83□□□□□ -1.16
GABPB1-204ENST00000396464 SEPT12Q8IYM1 358 aa7.83□□□□□ -1.16
GABPB1-204ENST00000396464 RNF217Q8TC41 542 aa7.83□□□□□ -1.16
GABPB1-204ENST00000396464 CYLDQ9NQC7 956 aa7.83□□□□□ -1.16
GABPB1-204ENST00000396464 PCDHB9Q9Y5E1 797 aa7.83□□□□□ -1.16
GABPB1-204ENST00000396464 SVOPQ8N4V2 548 aa7.82□□□□□ -1.16
GABPB1-204ENST00000396464 CLUAP1Q96AJ1 413 aa7.82□□□□□ -1.16
GABPB1-204ENST00000396464 KRT76Q01546 638 aa7.81□□□□□ -1.16
GABPB1-204ENST00000396464 LYSMD3Q7Z3D4 306 aa7.81□□□□□ -1.16
GABPB1-204ENST00000396464 ESF1Q9H501 851 aaKnown RBP7.81□□□□□ -1.16
GABPB1-204ENST00000396464 GOPCQ9HD26 462 aa7.81□□□□□ -1.16
GABPB1-204ENST00000396464 ZBBXA8MT70 800 aa7.8□□□□□ -1.16
GABPB1-204ENST00000396464 PUS7Q96PZ0 661 aaKnown RBP7.8□□□□□ -1.16
GABPB1-204ENST00000396464 ESPNB1AK53 854 aa7.79□□□□□ -1.16
GABPB1-204ENST00000396464 LILRA1O75019 489 aa7.79□□□□□ -1.16
GABPB1-204ENST00000396464 ADD1P35611 737 aaKnown RBP7.79□□□□□ -1.16
GABPB1-204ENST00000396464 GZF1Q9H116 711 aaPredicted RBP7.79□□□□□ -1.16
GABPB1-204ENST00000396464 ATP5J2-PTCD1G3V325 749 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 MEN1O00255 615 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 KCNMA1Q12791 1236 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 RNFT1Q5M7Z0 435 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 RNF20Q5VTR2 975 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 PRICKLE2Q7Z3G6 844 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 CCDC125Q86Z20 511 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 TMEM151AQ8N4L1 468 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 ZNF592Q92610 1267 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 ADAMTS8Q9UP79 889 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 ZNF330Q9Y3S2 320 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-204ENST00000396464 GIGYF1O75420 1035 aaPredicted RBP7.78□□□□□ -1.16
GABPB1-204ENST00000396464 FOXR1Q6PIV2 292 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 TRIM34Q9BYJ4 488 aa7.78□□□□□ -1.16
GABPB1-204ENST00000396464 MARSP56192 900 aaKnown RBP7.77□□□□□ -1.17
GABPB1-204ENST00000396464 NLRP3Q96P20 1036 aa7.77□□□□□ -1.17
GABPB1-204ENST00000396464 GDF11O95390 407 aa7.76□□□□□ -1.17
GABPB1-204ENST00000396464 RHOQP17081 205 aa7.76□□□□□ -1.17
GABPB1-204ENST00000396464 MAP3K10Q02779 954 aa7.76□□□□□ -1.17
GABPB1-204ENST00000396464 SLC27A3Q5K4L6 730 aa7.76□□□□□ -1.17
GABPB1-204ENST00000396464 ZNF385CQ66K41 422 aaPredicted RBP7.76□□□□□ -1.17
GABPB1-204ENST00000396464 SENP3-EIF4A1A0A087X0R7 540 aa7.75□□□□□ -1.17
GABPB1-204ENST00000396464 FBXO45P0C2W1 286 aa7.75□□□□□ -1.17
GABPB1-204ENST00000396464 RNF144AP50876 292 aaPredicted RBP7.75□□□□□ -1.17
GABPB1-204ENST00000396464 MCCD1P59942 119 aaPredicted RBP7.75□□□□□ -1.17
GABPB1-204ENST00000396464 RASSF7Q02833 373 aa7.75□□□□□ -1.17
GABPB1-204ENST00000396464 RIPOR1Q6ZS17 1223 aa7.75□□□□□ -1.17
GABPB1-204ENST00000396464 RETREG2Q8NC44 543 aa7.75□□□□□ -1.17
GABPB1-204ENST00000396464 E9PSI1 815 aa7.74□□□□□ -1.17
GABPB1-204ENST00000396464 SLURP2P0DP57 97 aa7.74□□□□□ -1.17
GABPB1-204ENST00000396464 CC2D2BQ6DHV5 1058 aa7.74□□□□□ -1.17
GABPB1-204ENST00000396464 CHMP4AQ9BY43 222 aa7.74□□□□□ -1.17
GABPB1-204ENST00000396464 ADAMTS2O95450 1211 aa7.73□□□□□ -1.17
GABPB1-204ENST00000396464 CYP2U1Q7Z449 544 aa7.73□□□□□ -1.17
GABPB1-204ENST00000396464 KDF1Q8NAX2 398 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-204ENST00000396464 A0A1W2PRU2 124 aa7.72□□□□□ -1.17
GABPB1-204ENST00000396464 GPC1P35052 558 aa7.72□□□□□ -1.17
GABPB1-204ENST00000396464 NR1H3Q13133 447 aa7.72□□□□□ -1.17
GABPB1-204ENST00000396464 WHAMMQ8TF30 809 aa7.72□□□□□ -1.17
GABPB1-204ENST00000396464 CCDC97Q96F63 343 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-204ENST00000396464 GMCL1Q96IK5 515 aa7.72□□□□□ -1.17
GABPB1-204ENST00000396464 ENAMQ9NRM1 1142 aa7.72□□□□□ -1.17
GABPB1-204ENST00000396464 ZNF777Q9ULD5 760 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-204ENST00000396464 H7C1W4 665 aa7.71□□□□□ -1.17
GABPB1-204ENST00000396464 SRSF11Q05519 484 aaKnown RBP7.71□□□□□ -1.17
GABPB1-204ENST00000396464 IRF5Q13568 498 aa7.71□□□□□ -1.17
GABPB1-204ENST00000396464 SCARF2Q96GP6 870 aaPredicted RBP7.71□□□□□ -1.17
GABPB1-204ENST00000396464 GAS2L1Q99501 681 aaPredicted RBP7.71□□□□□ -1.17
GABPB1-204ENST00000396464 SERPINA10Q9UK55 444 aa7.71□□□□□ -1.17
GABPB1-204ENST00000396464 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.17
GABPB1-204ENST00000396464 IRS1P35568 1242 aa7.7□□□□□ -1.18
GABPB1-204ENST00000396464 ERVK-9P63128 1117 aa7.7□□□□□ -1.18
GABPB1-204ENST00000396464 TRIM22Q8IYM9 498 aa7.7□□□□□ -1.18
GABPB1-204ENST00000396464 GJD4Q96KN9 370 aaPredicted RBP7.7□□□□□ -1.18
GABPB1-204ENST00000396464 TRERF1Q96PN7 1200 aa7.7□□□□□ -1.18
GABPB1-204ENST00000396464 BANK1Q8NDB2 785 aa7.69□□□□□ -1.18
GABPB1-204ENST00000396464 CUEDC1Q9NWM3 386 aaPredicted RBP7.69□□□□□ -1.18
GABPB1-204ENST00000396464 NDUFB9Q9Y6M9 179 aa7.69□□□□□ -1.18
GABPB1-204ENST00000396464 POU4F2Q12837 409 aa7.69□□□□□ -1.18
GABPB1-204ENST00000396464 PROSER2Q86WR7 435 aaPredicted RBP7.69□□□□□ -1.18
GABPB1-204ENST00000396464 ZNF837Q96EG3 531 aaPredicted RBP7.69□□□□□ -1.18
GABPB1-204ENST00000396464 DYRK1BQ9Y463 629 aa7.69□□□□□ -1.18
GABPB1-204ENST00000396464 GPR25O00155 361 aa7.68□□□□□ -1.18
GABPB1-204ENST00000396464 MYCP01106 439 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms