RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 ATRNO75882 1429 aa13.02□□□□□ -0.32
DDX39B-202ENST00000396172 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.33
DDX39B-202ENST00000396172 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.33
DDX39B-202ENST00000396172 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.33
DDX39B-202ENST00000396172 SPATA31A5Q5VU36 1347 aa13.02□□□□□ -0.33
DDX39B-202ENST00000396172 SPATA31A7Q8IWB4 1347 aa13.02□□□□□ -0.33
DDX39B-202ENST00000396172 GLI3P10071 1580 aa13.02□□□□□ -0.33
DDX39B-202ENST00000396172 IL2RBP14784 551 aa13.01□□□□□ -0.33
DDX39B-202ENST00000396172 TCP11L2Q8N4U5 519 aa13.01□□□□□ -0.33
DDX39B-202ENST00000396172 DISP2A7MBM2 1401 aa13.01□□□□□ -0.33
DDX39B-202ENST00000396172 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
DDX39B-202ENST00000396172 HNRNPUQ00839 825 aaKnown RBP eCLIP13.01□□□□□ -0.33
DDX39B-202ENST00000396172 LMOD3Q0VAK6 560 aa13.01□□□□□ -0.33
DDX39B-202ENST00000396172 PLEKHO1Q53GL0 409 aaPredicted RBP13.01□□□□□ -0.33
DDX39B-202ENST00000396172 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
DDX39B-202ENST00000396172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.01□□□□□ -0.336e-20■□□□□ 9.3
DDX39B-202ENST00000396172 TRPC5Q9UL62 973 aaPredicted RBP13.01□□□□□ -0.33
DDX39B-202ENST00000396172 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
DDX39B-202ENST00000396172 TNS2Q63HR2 1409 aa13□□□□□ -0.33
DDX39B-202ENST00000396172 NFE2L2Q16236 605 aa13□□□□□ -0.33
DDX39B-202ENST00000396172 SPG7Q9UQ90 795 aa13□□□□□ -0.33
DDX39B-202ENST00000396172 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
DDX39B-202ENST00000396172 ZBED9Q6R2W3 1325 aa12.99□□□□□ -0.33
DDX39B-202ENST00000396172 BARGINQ6ZT62 677 aa12.99□□□□□ -0.33
DDX39B-202ENST00000396172 KAT6BQ8WYB5 2073 aa12.99□□□□□ -0.33
DDX39B-202ENST00000396172 APAF1O14727 1248 aa12.98□□□□□ -0.33
DDX39B-202ENST00000396172 USP35Q9P2H5 1018 aa12.98□□□□□ -0.33
DDX39B-202ENST00000396172 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
DDX39B-202ENST00000396172 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
DDX39B-202ENST00000396172 TMPOP42166 694 aaKnown RBP12.98□□□□□ -0.33
DDX39B-202ENST00000396172 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
DDX39B-202ENST00000396172 ITGB4P16144 1822 aa12.97□□□□□ -0.33
DDX39B-202ENST00000396172 BRWD3Q6RI45 1802 aa12.97□□□□□ -0.33
DDX39B-202ENST00000396172 CCDC27Q2M243 656 aa12.97□□□□□ -0.33
DDX39B-202ENST00000396172 C1orf141Q5JVX7 400 aa12.97□□□□□ -0.33
DDX39B-202ENST00000396172 PHACTR3Q96KR7 559 aa12.97□□□□□ -0.33
DDX39B-202ENST00000396172 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.33
DDX39B-202ENST00000396172 ZNF530Q6P9A1 599 aaPredicted RBP12.96□□□□□ -0.33
DDX39B-202ENST00000396172 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
DDX39B-202ENST00000396172 RIPK4P57078 832 aa12.95□□□□□ -0.34
DDX39B-202ENST00000396172 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
DDX39B-202ENST00000396172 AKAP4Q5JQC9 854 aa12.95□□□□□ -0.34
DDX39B-202ENST00000396172 GJD4Q96KN9 370 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-202ENST00000396172 HSP90AB1P08238 724 aaKnown RBP12.95□□□□□ -0.34
DDX39B-202ENST00000396172 MTHFSDQ2M296 383 aaKnown RBP12.95□□□□□ -0.34
DDX39B-202ENST00000396172 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
DDX39B-202ENST00000396172 RTF1Q92541 710 aaKnown RBP12.95□□□□□ -0.34
DDX39B-202ENST00000396172 PHF23Q9BUL5 403 aaPredicted RBP12.95□□□□□ -0.34
DDX39B-202ENST00000396172 TOGARAM1Q9Y4F4 1720 aa12.95□□□□□ -0.34
DDX39B-202ENST00000396172 GNAT3A8MTJ3 354 aa12.94□□□□□ -0.34
DDX39B-202ENST00000396172 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
DDX39B-202ENST00000396172 NEUROD2Q15784 382 aa12.94□□□□□ -0.34
DDX39B-202ENST00000396172 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
DDX39B-202ENST00000396172 IFNL2Q8IZJ0 200 aa12.94□□□□□ -0.34
DDX39B-202ENST00000396172 QTRT2Q9H974 415 aaKnown RBP12.94□□□□□ -0.34
DDX39B-202ENST00000396172 SBF2Q86WG5 1849 aa12.94□□□□□ -0.34
DDX39B-202ENST00000396172 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
DDX39B-202ENST00000396172 MRC1P22897 1456 aa12.93□□□□□ -0.34
DDX39B-202ENST00000396172 EXOC5O00471 708 aa12.92□□□□□ -0.34
DDX39B-202ENST00000396172 PDE3BQ13370 1112 aa12.92□□□□□ -0.34
DDX39B-202ENST00000396172 DDB1Q16531 1140 aa12.92□□□□□ -0.34
DDX39B-202ENST00000396172 FAM98CQ17RN3 349 aaKnown RBP12.92□□□□□ -0.34
DDX39B-202ENST00000396172 RBM6P78332 1123 aaKnown RBP12.91□□□□□ -0.34
DDX39B-202ENST00000396172 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
DDX39B-202ENST00000396172 IL16Q14005 1332 aa12.91□□□□□ -0.34
DDX39B-202ENST00000396172 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
DDX39B-202ENST00000396172 PAPPAQ13219 1627 aa12.91□□□□□ -0.34
DDX39B-202ENST00000396172 A0A0G2JS52 829 aa12.91□□□□□ -0.34
DDX39B-202ENST00000396172 PHKG2P15735 406 aa12.91□□□□□ -0.34
DDX39B-202ENST00000396172 WWC1Q8IX03 1113 aa12.91□□□□□ -0.34
DDX39B-202ENST00000396172 NHSQ6T4R5 1651 aa12.9□□□□□ -0.34
DDX39B-202ENST00000396172 DCAF5Q96JK2 942 aa12.9□□□□□ -0.34
DDX39B-202ENST00000396172 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
DDX39B-202ENST00000396172 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
DDX39B-202ENST00000396172 CACNA1FO60840 1977 aa12.9□□□□□ -0.34
DDX39B-202ENST00000396172 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
DDX39B-202ENST00000396172 ONECUT3O60422 494 aaPredicted RBP12.89□□□□□ -0.35
DDX39B-202ENST00000396172 UBR2Q8IWV8 1755 aa12.89□□□□□ -0.35
DDX39B-202ENST00000396172 CYP27B1O15528 508 aa12.89□□□□□ -0.35
DDX39B-202ENST00000396172 GOLGA2Q08379 1002 aa12.89□□□□□ -0.35
DDX39B-202ENST00000396172 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-202ENST00000396172 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
DDX39B-202ENST00000396172 E9PSI1 815 aa12.88□□□□□ -0.35
DDX39B-202ENST00000396172 RXRBP28702 533 aa12.88□□□□□ -0.35
DDX39B-202ENST00000396172 SUPT16HQ9Y5B9 1047 aaKnown RBP12.88□□□□□ -0.35
DDX39B-202ENST00000396172 RNMTO43148 476 aaKnown RBP12.87□□□□□ -0.35
DDX39B-202ENST00000396172 TEFQ10587 303 aa12.87□□□□□ -0.35
DDX39B-202ENST00000396172 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
DDX39B-202ENST00000396172 MYH16Q9H6N6 1097 aa12.87□□□□□ -0.35
DDX39B-202ENST00000396172 LAMB4A4D0S4 1761 aa12.86□□□□□ -0.35
DDX39B-202ENST00000396172 GNAI1P63096 354 aa12.86□□□□□ -0.35
DDX39B-202ENST00000396172 MCM10Q7L590 875 aa12.86□□□□□ -0.35
DDX39B-202ENST00000396172 IFT57Q9NWB7 429 aa12.86□□□□□ -0.35
DDX39B-202ENST00000396172 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
DDX39B-202ENST00000396172 BCL9O00512 1426 aa12.86□□□□□ -0.35
DDX39B-202ENST00000396172 BTAF1O14981 1849 aa12.86□□□□□ -0.35
DDX39B-202ENST00000396172 SENP3-EIF4A1A0A087X0R7 540 aa12.86□□□□□ -0.35
DDX39B-202ENST00000396172 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
DDX39B-202ENST00000396172 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
DDX39B-202ENST00000396172 SEPT12Q8IYM1 358 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms