RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 NSD2O96028 1365 aa22.48■■□□□ 1.19
CXCL12-206ENST00000395795 NCAPD2Q15021 1401 aa22.48■■□□□ 1.19
CXCL12-206ENST00000395795 ZCRB1Q8TBF4 217 aaKnown RBP22.45■■□□□ 1.18
CXCL12-206ENST00000395795 LRRC4BQ9NT99 713 aa22.45■■□□□ 1.18
CXCL12-206ENST00000395795 CGNL1Q0VF96 1302 aa22.43■■□□□ 1.18
CXCL12-206ENST00000395795 POLKQ9UBT6 870 aa22.43■■□□□ 1.18
CXCL12-206ENST00000395795 SLC15A2Q16348 729 aa22.42■■□□□ 1.18
CXCL12-206ENST00000395795 DOT1LQ8TEK3 1739 aa22.42■■□□□ 1.18
CXCL12-206ENST00000395795 WASHC2AQ641Q2 1341 aa22.41■■□□□ 1.18
CXCL12-206ENST00000395795 SMG6Q86US8 1419 aaKnown RBP22.4■■□□□ 1.18
CXCL12-206ENST00000395795 PRIM1P49642 420 aaKnown RBP22.4■■□□□ 1.18
CXCL12-206ENST00000395795 PANK3Q9H999 370 aa22.4■■□□□ 1.18
CXCL12-206ENST00000395795 SPON1Q9HCB6 807 aa22.4■■□□□ 1.18
CXCL12-206ENST00000395795 MAP2P11137 1827 aaKnown RBP22.39■■□□□ 1.17
CXCL12-206ENST00000395795 ZNF827Q17R98 1081 aa22.39■■□□□ 1.17
CXCL12-206ENST00000395795 POLR3GLQ9BT43 218 aa22.39■■□□□ 1.17
CXCL12-206ENST00000395795 PTGER2P43116 358 aa22.38■■□□□ 1.17
CXCL12-206ENST00000395795 KAT6BQ8WYB5 2073 aa22.38■■□□□ 1.17
CXCL12-206ENST00000395795 CYP27B1O15528 508 aa22.37■■□□□ 1.17
CXCL12-206ENST00000395795 STK32BQ9NY57 414 aa22.37■■□□□ 1.17
CXCL12-206ENST00000395795 RAPGEF4Q8WZA2 1011 aa22.36■■□□□ 1.17
CXCL12-206ENST00000395795 AKT1S1Q96B36 256 aa22.36■■□□□ 1.17
CXCL12-206ENST00000395795 EYA1Q99502 592 aa22.36■■□□□ 1.17
CXCL12-206ENST00000395795 SGIP1Q9BQI5 828 aa22.36■■□□□ 1.17
CXCL12-206ENST00000395795 PKD1L3Q7Z443 1732 aa22.36■■□□□ 1.17
CXCL12-206ENST00000395795 LY75O60449 1722 aa22.35■■□□□ 1.17
CXCL12-206ENST00000395795 ZBTB7AO95365 584 aa22.35■■□□□ 1.17
CXCL12-206ENST00000395795 TATP17735 454 aaPredicted RBP22.35■■□□□ 1.17
CXCL12-206ENST00000395795 KCNQ4P56696 695 aa22.34■■□□□ 1.17
CXCL12-206ENST00000395795 TOGARAM1Q9Y4F4 1720 aa22.34■■□□□ 1.17
CXCL12-206ENST00000395795 PPM1GO15355 546 aaPredicted RBP22.33■■□□□ 1.17
CXCL12-206ENST00000395795 EIF4A2Q14240 407 aaKnown RBP22.32■■□□□ 1.16
CXCL12-206ENST00000395795 SLC27A3Q5K4L6 730 aa22.32■■□□□ 1.16
CXCL12-206ENST00000395795 PCDH11XQ9BZA7 1347 aa22.31■■□□□ 1.16
CXCL12-206ENST00000395795 PCDH11YQ9BZA8 1340 aa22.31■■□□□ 1.16
CXCL12-206ENST00000395795 TNNT2P45379 298 aaPredicted RBP22.31■■□□□ 1.16
CXCL12-206ENST00000395795 SYTL4Q96C24 671 aaPredicted RBP22.31■■□□□ 1.16
CXCL12-206ENST00000395795 KIF7Q2M1P5 1343 aa22.31■■□□□ 1.16
CXCL12-206ENST00000395795 ATF5Q9Y2D1 282 aaPredicted RBP22.3■■□□□ 1.16
CXCL12-206ENST00000395795 NKX1-1Q15270 411 aaPredicted RBP22.29■■□□□ 1.16
CXCL12-206ENST00000395795 MTFR1LQ9H019 292 aa22.28■■□□□ 1.16
CXCL12-206ENST00000395795 TUBGCP6Q96RT7 1819 aa22.28■■□□□ 1.16
CXCL12-206ENST00000395795 QSER1Q2KHR3 1735 aa22.28■■□□□ 1.16
CXCL12-206ENST00000395795 AMER1Q5JTC6 1135 aaPredicted RBP22.27■■□□□ 1.16
CXCL12-206ENST00000395795 PNPLA7Q6ZV29 1317 aa22.27■■□□□ 1.16
CXCL12-206ENST00000395795 IGSF1Q8N6C5 1336 aa22.26■■□□□ 1.15
CXCL12-206ENST00000395795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.25■■□□□ 1.15
CXCL12-206ENST00000395795 COL24A1Q17RW2 1714 aa22.25■■□□□ 1.15
CXCL12-206ENST00000395795 ITGB4P16144 1822 aa22.24■■□□□ 1.15
CXCL12-206ENST00000395795 PER1O15534 1290 aaPredicted RBP22.24■■□□□ 1.15
CXCL12-206ENST00000395795 PPP1R1BQ9UD71 204 aaPredicted RBP22.24■■□□□ 1.15
CXCL12-206ENST00000395795 CCNL1Q9UK58 526 aaPredicted RBP22.23■■□□□ 1.15
CXCL12-206ENST00000395795 PIGBQ92521 554 aa22.22■■□□□ 1.15
CXCL12-206ENST00000395795 MPRIPQ6WCQ1 1025 aa22.21■■□□□ 1.15
CXCL12-206ENST00000395795 PALLDQ8WX93 1383 aa22.21■■□□□ 1.15
CXCL12-206ENST00000395795 PLEKHG2Q9H7P9 1386 aa22.21■■□□□ 1.15
CXCL12-206ENST00000395795 PHKG2P15735 406 aa22.2■■□□□ 1.14
CXCL12-206ENST00000395795 MORC1Q86VD1 984 aa22.2■■□□□ 1.14
CXCL12-206ENST00000395795 SPG7Q9UQ90 795 aa22.2■■□□□ 1.14
CXCL12-206ENST00000395795 KNSTRNQ9Y448 316 aa22.19■■□□□ 1.14
CXCL12-206ENST00000395795 SYT17Q9BSW7 474 aa22.18■■□□□ 1.14
CXCL12-206ENST00000395795 FHDC1Q9C0D6 1143 aaPredicted RBP22.18■■□□□ 1.14
CXCL12-206ENST00000395795 TAF1LQ8IZX4 1826 aa22.17■■□□□ 1.14
CXCL12-206ENST00000395795 C5P01031 1676 aa22.17■■□□□ 1.14
CXCL12-206ENST00000395795 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
CXCL12-206ENST00000395795 AEBP1Q8IUX7 1158 aa22.17■■□□□ 1.14
CXCL12-206ENST00000395795 SLC16A10Q8TF71 515 aa22.17■■□□□ 1.14
CXCL12-206ENST00000395795 IL13P35225 146 aa22.16■■□□□ 1.14
CXCL12-206ENST00000395795 COL23A1Q86Y22 540 aaPredicted RBP22.16■■□□□ 1.14
CXCL12-206ENST00000395795 TFCP2L1Q9NZI6 479 aa22.16■■□□□ 1.14
CXCL12-206ENST00000395795 MAP3K5Q99683 1374 aa22.15■■□□□ 1.14
CXCL12-206ENST00000395795 IFNL2Q8IZJ0 200 aa22.15■■□□□ 1.14
CXCL12-206ENST00000395795 KDRP35968 1356 aa22.14■■□□□ 1.14
CXCL12-206ENST00000395795 ARXQ96QS3 562 aa22.14■■□□□ 1.13
CXCL12-206ENST00000395795 ASAP1Q9ULH1 1129 aa22.13■■□□□ 1.13
CXCL12-206ENST00000395795 KDM6AO15550 1401 aaPredicted RBP22.13■■□□□ 1.13
CXCL12-206ENST00000395795 SMARCC1Q92922 1105 aaPredicted RBP22.12■■□□□ 1.13
CXCL12-206ENST00000395795 C4BP0C0L5 1744 aa22.11■■□□□ 1.13
CXCL12-206ENST00000395795 ATG3Q9NT62 314 aa22.1■■□□□ 1.13
CXCL12-206ENST00000395795 LOC102724428A0A0B4J2F2 783 aa22.09■■□□□ 1.13
CXCL12-206ENST00000395795 MTHFSP49914 203 aa22.09■■□□□ 1.13
CXCL12-206ENST00000395795 SIK1P57059 783 aa22.09■■□□□ 1.13
CXCL12-206ENST00000395795 ITPK1Q13572 414 aa22.09■■□□□ 1.13
CXCL12-206ENST00000395795 SMIM5Q71RC9 77 aa22.09■■□□□ 1.13
CXCL12-206ENST00000395795 LINC00116Q8NCU8 138 aa22.09■■□□□ 1.13
CXCL12-206ENST00000395795 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
CXCL12-206ENST00000395795 TMOD3Q9NYL9 352 aa22.09■■□□□ 1.13
CXCL12-206ENST00000395795 NPC1L1Q9UHC9 1359 aa22.09■■□□□ 1.13
CXCL12-206ENST00000395795 UBR3Q6ZT12 1888 aa22.07■■□□□ 1.12
CXCL12-206ENST00000395795 PLEKHO1Q53GL0 409 aaPredicted RBP22.07■■□□□ 1.12
CXCL12-206ENST00000395795 SULT6B1Q6IMI4 303 aa22.07■■□□□ 1.12
CXCL12-206ENST00000395795 ERVV-2B6SEH9 535 aa22.06■■□□□ 1.12
CXCL12-206ENST00000395795 CC2D1BQ5T0F9 858 aaKnown RBP22.06■■□□□ 1.12
CXCL12-206ENST00000395795 ZNF530Q6P9A1 599 aaPredicted RBP22.06■■□□□ 1.12
CXCL12-206ENST00000395795 DCAF5Q96JK2 942 aa22.06■■□□□ 1.12
CXCL12-206ENST00000395795 COL3A1P02461 1466 aaPredicted RBP22.06■■□□□ 1.12
CXCL12-206ENST00000395795 AMOTQ4VCS5 1084 aa22.05■■□□□ 1.12
CXCL12-206ENST00000395795 UTRNP46939 3433 aa22.02■■□□□ 1.12
CXCL12-206ENST00000395795 MSL1Q68DK7 614 aa22.02■■□□□ 1.12
CXCL12-206ENST00000395795 ZNF831Q5JPB2 1677 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms