RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 NCKAP5LQ9HCH0 1330 aa17.55■□□□□ 0.4
CLIP2-203ENST00000395060 C17orf53Q8N3J3 647 aaPredicted RBP17.54■□□□□ 0.4
CLIP2-203ENST00000395060 MEIS3Q99687 375 aa17.54■□□□□ 0.4
CLIP2-203ENST00000395060 ZNF445P59923 1031 aa17.54■□□□□ 0.4
CLIP2-203ENST00000395060 GNAI1P63096 354 aa17.54■□□□□ 0.4
CLIP2-203ENST00000395060 NME9Q86XW9 330 aa17.53■□□□□ 0.4
CLIP2-203ENST00000395060 UPF3BQ9BZI7 483 aaKnown RBP17.53■□□□□ 0.4
CLIP2-203ENST00000395060 NSD2O96028 1365 aa17.52■□□□□ 0.4
CLIP2-203ENST00000395060 F6X3S4 739 aa17.52■□□□□ 0.4
CLIP2-203ENST00000395060 MCM10Q7L590 875 aa17.52■□□□□ 0.4
CLIP2-203ENST00000395060 NECTIN2Q92692 538 aa17.52■□□□□ 0.4
CLIP2-203ENST00000395060 NUTM2FA1L443 756 aa17.52■□□□□ 0.4
CLIP2-203ENST00000395060 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.4
CLIP2-203ENST00000395060 NOL7Q9UMY1 257 aaKnown RBP17.52■□□□□ 0.4
CLIP2-203ENST00000395060 CASC1Q6TDU7 716 aa17.52■□□□□ 0.39
CLIP2-203ENST00000395060 RILPL2Q969X0 211 aa17.52■□□□□ 0.39
CLIP2-203ENST00000395060 ADGRB2O60241 1585 aa17.51■□□□□ 0.39
CLIP2-203ENST00000395060 EXOC6BQ9Y2D4 811 aa17.51■□□□□ 0.39
CLIP2-203ENST00000395060 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
CLIP2-203ENST00000395060 YTHDC2Q9H6S0 1430 aaKnown RBP17.5■□□□□ 0.39
CLIP2-203ENST00000395060 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
CLIP2-203ENST00000395060 API5Q9BZZ5 524 aaKnown RBP17.5■□□□□ 0.39
CLIP2-203ENST00000395060 DCTPP1Q9H773 170 aa17.5■□□□□ 0.39
CLIP2-203ENST00000395060 ABCC4O15439 1325 aa17.5■□□□□ 0.39
CLIP2-203ENST00000395060 ARHGAP31Q2M1Z3 1444 aa17.5■□□□□ 0.39
CLIP2-203ENST00000395060 RICTORQ6R327 1708 aa17.5■□□□□ 0.39
CLIP2-203ENST00000395060 TRIM6-TRIM34B2RNG4 842 aa17.5■□□□□ 0.39
CLIP2-203ENST00000395060 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
CLIP2-203ENST00000395060 ZKSCAN5Q9Y2L8 839 aa17.5■□□□□ 0.39
CLIP2-203ENST00000395060 MYO3AQ8NEV4 1616 aa17.49■□□□□ 0.39
CLIP2-203ENST00000395060 GADD45BO75293 160 aaPredicted RBP17.49■□□□□ 0.39
CLIP2-203ENST00000395060 CYP2E1P05181 493 aaPredicted RBP17.49■□□□□ 0.39
CLIP2-203ENST00000395060 TMX3Q96JJ7 454 aa17.49■□□□□ 0.39
CLIP2-203ENST00000395060 ANO2Q9NQ90 1003 aa17.49■□□□□ 0.39
CLIP2-203ENST00000395060 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
CLIP2-203ENST00000395060 LRSAM1Q6UWE0 723 aa17.48■□□□□ 0.39
CLIP2-203ENST00000395060 BCL11BQ9C0K0 894 aaPredicted RBP17.48■□□□□ 0.39
CLIP2-203ENST00000395060 MYO5BQ9ULV0 1848 aa17.48■□□□□ 0.39
CLIP2-203ENST00000395060 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
CLIP2-203ENST00000395060 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLIP2-203ENST00000395060 IFT57Q9NWB7 429 aa17.47■□□□□ 0.39
CLIP2-203ENST00000395060 COL3A1P02461 1466 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-203ENST00000395060 MAP4K4O95819 1239 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-203ENST00000395060 ZHX1Q9UKY1 873 aaPredicted RBP17.47■□□□□ 0.39
CLIP2-203ENST00000395060 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
CLIP2-203ENST00000395060 ARHGAP45Q92619 1136 aa17.46■□□□□ 0.39
CLIP2-203ENST00000395060 ERC2O15083 957 aa17.45■□□□□ 0.38
CLIP2-203ENST00000395060 CLEC17AQ6ZS10 378 aa17.45■□□□□ 0.38
CLIP2-203ENST00000395060 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
CLIP2-203ENST00000395060 TTC12Q9H892 705 aaPredicted RBP17.45■□□□□ 0.38
CLIP2-203ENST00000395060 REC8O95072 547 aa17.45■□□□□ 0.38
CLIP2-203ENST00000395060 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
CLIP2-203ENST00000395060 USP25Q9UHP3 1055 aa17.45■□□□□ 0.38
CLIP2-203ENST00000395060 MSH6P52701 1360 aa17.45■□□□□ 0.38
CLIP2-203ENST00000395060 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
CLIP2-203ENST00000395060 ANKRD44Q8N8A2 993 aa17.45■□□□□ 0.38
CLIP2-203ENST00000395060 PDLIM2Q96JY6 352 aa17.45■□□□□ 0.38
CLIP2-203ENST00000395060 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.45■□□□□ 0.38
CLIP2-203ENST00000395060 SULT6B1Q6IMI4 303 aa17.44■□□□□ 0.38
CLIP2-203ENST00000395060 CWC22Q9HCG8 908 aaKnown RBP17.44■□□□□ 0.38
CLIP2-203ENST00000395060 ARHGEF28Q8N1W1 1705 aaKnown RBP17.44■□□□□ 0.38
CLIP2-203ENST00000395060 MED14O60244 1454 aa17.44■□□□□ 0.38
CLIP2-203ENST00000395060 PUS7Q96PZ0 661 aaKnown RBP17.43■□□□□ 0.38
CLIP2-203ENST00000395060 ZNF500O60304 480 aaPredicted RBP17.43■□□□□ 0.38
CLIP2-203ENST00000395060 G2E3Q7L622 706 aa17.43■□□□□ 0.38
CLIP2-203ENST00000395060 CCDC39Q9UFE4 941 aa17.43■□□□□ 0.38
CLIP2-203ENST00000395060 PTPRMP28827 1452 aa17.43■□□□□ 0.38
CLIP2-203ENST00000395060 TSPY26PQ9H489 355 aa17.43■□□□□ 0.38
CLIP2-203ENST00000395060 IBTKQ9P2D0 1353 aaPredicted RBP17.42■□□□□ 0.38
CLIP2-203ENST00000395060 IL13P35225 146 aa17.42■□□□□ 0.38
CLIP2-203ENST00000395060 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
CLIP2-203ENST00000395060 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
CLIP2-203ENST00000395060 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 CHMP3Q9Y3E7 222 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 ZC3H13Q5T200 1668 aaKnown RBP17.41■□□□□ 0.38
CLIP2-203ENST00000395060 PREX1Q8TCU6 1659 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 FAM135BQ49AJ0 1406 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 TMEM131LA2VDJ0 1609 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 ZFYVE9O95405 1425 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 RIMS2Q9UQ26 1411 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 PDE1AP54750 535 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 RIMBP3CA6NJZ7 1639 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 RIMBP3BA6NNM3 1639 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 RIMBP3Q9UFD9 1639 aa17.41■□□□□ 0.38
CLIP2-203ENST00000395060 IL1RAPL2Q9NP60 686 aa17.4■□□□□ 0.38
CLIP2-203ENST00000395060 DDX54Q8TDD1 881 aaKnown RBP17.4■□□□□ 0.38
CLIP2-203ENST00000395060 FOXO3O43524 673 aa17.39■□□□□ 0.37
CLIP2-203ENST00000395060 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-203ENST00000395060 BRPF1P55201 1214 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-203ENST00000395060 USP48Q86UV5 1035 aa17.39■□□□□ 0.37
CLIP2-203ENST00000395060 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
CLIP2-203ENST00000395060 UNC5CLQ8IV45 518 aa17.38■□□□□ 0.37
CLIP2-203ENST00000395060 METP08581 1390 aa17.38■□□□□ 0.37
CLIP2-203ENST00000395060 CD163L1Q9NR16 1453 aa17.38■□□□□ 0.37
CLIP2-203ENST00000395060 CBX1P83916 185 aa17.38■□□□□ 0.37
CLIP2-203ENST00000395060 SASS6Q6UVJ0 657 aa17.38■□□□□ 0.37
CLIP2-203ENST00000395060 ALKQ9UM73 1620 aa17.38■□□□□ 0.37
CLIP2-203ENST00000395060 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
CLIP2-203ENST00000395060 FIBPO43427 364 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms