RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 PPFIA3O75145 1194 aa20.41■□□□□ 0.86
SIPA1-201ENST00000394224 REC8O95072 547 aa20.41■□□□□ 0.86
SIPA1-201ENST00000394224 NUDT16Q96DE0 195 aaKnown RBP20.41■□□□□ 0.86
SIPA1-201ENST00000394224 CHMP4BQ9H444 224 aaKnown RBP20.41■□□□□ 0.86
SIPA1-201ENST00000394224 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
SIPA1-201ENST00000394224 ZCCHC11Q5TAX3 1644 aaKnown RBP20.4■□□□□ 0.86
SIPA1-201ENST00000394224 IL16Q14005 1332 aa20.4■□□□□ 0.86
SIPA1-201ENST00000394224 PNMA6EA0A0J9YXQ4 647 aa20.4■□□□□ 0.86
SIPA1-201ENST00000394224 SHPRHQ149N8 1683 aa20.4■□□□□ 0.86
SIPA1-201ENST00000394224 OS9Q13438 667 aaPredicted RBP20.4■□□□□ 0.86
SIPA1-201ENST00000394224 SPG7Q9UQ90 795 aa20.39■□□□□ 0.86
SIPA1-201ENST00000394224 CYB5RLQ6IPT4 315 aa20.39■□□□□ 0.85
SIPA1-201ENST00000394224 TULP4Q9NRJ4 1543 aa20.39■□□□□ 0.85
SIPA1-201ENST00000394224 PDE1AP54750 535 aa20.39■□□□□ 0.85
SIPA1-201ENST00000394224 ANKRD44Q8N8A2 993 aa20.39■□□□□ 0.85
SIPA1-201ENST00000394224 TCEANC2Q96MN5 208 aa20.38■□□□□ 0.85
SIPA1-201ENST00000394224 SBNO2Q9Y2G9 1366 aa20.38■□□□□ 0.85
SIPA1-201ENST00000394224 IGSF3O75054 1194 aa20.38■□□□□ 0.85
SIPA1-201ENST00000394224 ESF1Q9H501 851 aaKnown RBP20.38■□□□□ 0.85
SIPA1-201ENST00000394224 FOSBP53539 338 aa20.38■□□□□ 0.85
SIPA1-201ENST00000394224 EIF4A2Q14240 407 aaKnown RBP20.38■□□□□ 0.85
SIPA1-201ENST00000394224 SLC26A8Q96RN1 970 aa20.37■□□□□ 0.85
SIPA1-201ENST00000394224 FERMT3Q86UX7 667 aa20.37■□□□□ 0.85
SIPA1-201ENST00000394224 IL25Q9H293 177 aa20.37■□□□□ 0.85
SIPA1-201ENST00000394224 MROH2AA6NES4 1674 aa20.37■□□□□ 0.85
SIPA1-201ENST00000394224 LRRFIP2Q9Y608 721 aaKnown RBP20.36■□□□□ 0.85
SIPA1-201ENST00000394224 ABCC4O15439 1325 aa20.36■□□□□ 0.85
SIPA1-201ENST00000394224 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
SIPA1-201ENST00000394224 STK31Q9BXU1 1019 aa20.36■□□□□ 0.85
SIPA1-201ENST00000394224 CWC27Q6UX04 472 aaKnown RBP20.36■□□□□ 0.85
SIPA1-201ENST00000394224 ZHX1Q9UKY1 873 aaPredicted RBP20.36■□□□□ 0.85
SIPA1-201ENST00000394224 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.35■□□□□ 0.85
SIPA1-201ENST00000394224 RPGRIP1LQ68CZ1 1315 aa20.35■□□□□ 0.85
SIPA1-201ENST00000394224 SURF6O75683 361 aaKnown RBP20.35■□□□□ 0.85
SIPA1-201ENST00000394224 CNPY2Q9Y2B0 182 aa20.35■□□□□ 0.85
SIPA1-201ENST00000394224 VPS37CA5D8V6 355 aaPredicted RBP20.35■□□□□ 0.85
SIPA1-201ENST00000394224 AMPHP49418 695 aa20.34■□□□□ 0.85
SIPA1-201ENST00000394224 FAM173BQ6P4H8 233 aa20.34■□□□□ 0.85
SIPA1-201ENST00000394224 FBXW7Q969H0 707 aa20.34■□□□□ 0.85
SIPA1-201ENST00000394224 HMMRO75330 724 aa20.34■□□□□ 0.85
SIPA1-201ENST00000394224 YTHDC2Q9H6S0 1430 aaKnown RBP20.34■□□□□ 0.85
SIPA1-201ENST00000394224 QRICH2Q9H0J4 1663 aa20.34■□□□□ 0.85
SIPA1-201ENST00000394224 MYOM2P54296 1465 aa20.34■□□□□ 0.85
SIPA1-201ENST00000394224 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
SIPA1-201ENST00000394224 OFD1O75665 1012 aa20.33■□□□□ 0.85
SIPA1-201ENST00000394224 CAMK4Q16566 473 aa20.33■□□□□ 0.85
SIPA1-201ENST00000394224 USP48Q86UV5 1035 aa20.33■□□□□ 0.85
SIPA1-201ENST00000394224 KCNJ4P48050 445 aa20.32■□□□□ 0.84
SIPA1-201ENST00000394224 GIMAP6Q6P9H5 292 aa20.32■□□□□ 0.84
SIPA1-201ENST00000394224 NSD2O96028 1365 aa20.32■□□□□ 0.84
SIPA1-201ENST00000394224 TPM2P07951 284 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 MX1P20591 662 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 ARHGAP45Q92619 1136 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 LRRCC1Q9C099 1032 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 TET3O43151 1660 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 KIF1BO60333 1816 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 LMOD2Q6P5Q4 547 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 TSPY26PQ9H489 355 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 MCCP23508 829 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 RPAP2Q8IXW5 612 aaPredicted RBP20.31■□□□□ 0.84
SIPA1-201ENST00000394224 PPP1R9BQ96SB3 815 aa20.31■□□□□ 0.84
SIPA1-201ENST00000394224 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.31■□□□□ 0.84
SIPA1-201ENST00000394224 WASLO00401 505 aaPredicted RBP20.3■□□□□ 0.84
SIPA1-201ENST00000394224 MTHFSDQ2M296 383 aaKnown RBP20.3■□□□□ 0.84
SIPA1-201ENST00000394224 LRSAM1Q6UWE0 723 aa20.3■□□□□ 0.84
SIPA1-201ENST00000394224 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.3■□□□□ 0.84
SIPA1-201ENST00000394224 PPRC1Q5VV67 1664 aaKnown RBP20.3■□□□□ 0.84
SIPA1-201ENST00000394224 NCOA3Q9Y6Q9 1424 aa20.3■□□□□ 0.84
SIPA1-201ENST00000394224 GNAI2P04899 355 aa20.29■□□□□ 0.84
SIPA1-201ENST00000394224 PHAXQ9H814 394 aaKnown RBP20.29■□□□□ 0.84
SIPA1-201ENST00000394224 ISY1Q9ULR0 285 aaKnown RBP20.29■□□□□ 0.84
SIPA1-201ENST00000394224 PTMSP20962 102 aa20.29■□□□□ 0.84
SIPA1-201ENST00000394224 NECAB1Q8N987 351 aa20.29■□□□□ 0.84
SIPA1-201ENST00000394224 SLC52A1Q9NWF4 448 aa20.29■□□□□ 0.84
SIPA1-201ENST00000394224 LRRC7Q96NW7 1537 aa20.28■□□□□ 0.84
SIPA1-201ENST00000394224 CBX1P83916 185 aa20.28■□□□□ 0.84
SIPA1-201ENST00000394224 NGDNQ8NEJ9 315 aaKnown RBP20.28■□□□□ 0.84
SIPA1-201ENST00000394224 SPDYE4A6NLX3 237 aa20.28■□□□□ 0.84
SIPA1-201ENST00000394224 STK3Q13188 491 aa20.28■□□□□ 0.84
SIPA1-201ENST00000394224 ESYT1Q9BSJ8 1104 aa20.28■□□□□ 0.84
SIPA1-201ENST00000394224 CCDC61Q9Y6R9 512 aa20.28■□□□□ 0.84
SIPA1-201ENST00000394224 ZNF853P0CG23 659 aa20.28■□□□□ 0.84
SIPA1-201ENST00000394224 RTL1A6NKG5 1358 aa20.28■□□□□ 0.84
SIPA1-201ENST00000394224 CCDC83Q8IWF9 413 aa20.27■□□□□ 0.84
SIPA1-201ENST00000394224 ZKSCAN5Q9Y2L8 839 aa20.27■□□□□ 0.84
SIPA1-201ENST00000394224 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.84
SIPA1-201ENST00000394224 ZNF445P59923 1031 aa20.27■□□□□ 0.84
SIPA1-201ENST00000394224 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
SIPA1-201ENST00000394224 PDCL3Q9H2J4 239 aa20.27■□□□□ 0.84
SIPA1-201ENST00000394224 VIRMAQ69YN4 1812 aaKnown RBP20.26■□□□□ 0.83
SIPA1-201ENST00000394224 CWC22Q9HCG8 908 aaKnown RBP20.26■□□□□ 0.83
SIPA1-201ENST00000394224 NAP1L2Q9ULW6 460 aaPredicted RBP20.26■□□□□ 0.83
SIPA1-201ENST00000394224 NOL7Q9UMY1 257 aaKnown RBP20.26■□□□□ 0.83
SIPA1-201ENST00000394224 ADGRB1O14514 1584 aa20.26■□□□□ 0.83
SIPA1-201ENST00000394224 CEBPZQ03701 1054 aaKnown RBP20.26■□□□□ 0.83
SIPA1-201ENST00000394224 POGZQ7Z3K3 1410 aa20.25■□□□□ 0.83
SIPA1-201ENST00000394224 FLIIQ13045 1269 aa20.25■□□□□ 0.83
SIPA1-201ENST00000394224 DRC7Q8IY82 874 aa20.25■□□□□ 0.83
SIPA1-201ENST00000394224 SRGAP3O43295 1099 aa20.25■□□□□ 0.83
SIPA1-201ENST00000394224 GLI2P10070 1586 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms