RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 TRIM27P14373 513 aa28.42■■■□□ 2.14
HMGA2-203ENST00000393578 NBPF6Q5VWK0 638 aa28.42■■■□□ 2.14
HMGA2-203ENST00000393578 DDX17Q92841 729 aaKnown RBP28.42■■■□□ 2.14
HMGA2-203ENST00000393578 NBPF4Q96M43 638 aa28.42■■■□□ 2.14
HMGA2-203ENST00000393578 MED1Q15648 1581 aaPredicted RBP28.41■■■□□ 2.14
HMGA2-203ENST00000393578 RBM19Q9Y4C8 960 aaKnown RBP28.41■■■□□ 2.14
HMGA2-203ENST00000393578 PXDNQ92626 1479 aa28.41■■■□□ 2.14
HMGA2-203ENST00000393578 MVPQ14764 893 aaKnown RBP28.41■■■□□ 2.14
HMGA2-203ENST00000393578 C8orf58Q8NAV2 365 aa28.41■■■□□ 2.14
HMGA2-203ENST00000393578 TNS3Q68CZ2 1445 aa28.4■■■□□ 2.14
HMGA2-203ENST00000393578 GNAT3A8MTJ3 354 aa28.39■■■□□ 2.14
HMGA2-203ENST00000393578 PLEKHG5O94827 1062 aa28.39■■■□□ 2.14
HMGA2-203ENST00000393578 USHBP1Q8N6Y0 703 aa28.39■■■□□ 2.14
HMGA2-203ENST00000393578 HAP1P54257 671 aaPredicted RBP28.38■■■□□ 2.13
HMGA2-203ENST00000393578 KIAA0232Q92628 1395 aa28.37■■■□□ 2.13
HMGA2-203ENST00000393578 ELL2O00472 640 aaPredicted RBP28.37■■■□□ 2.13
HMGA2-203ENST00000393578 BRINP3Q76B58 766 aa28.37■■■□□ 2.13
HMGA2-203ENST00000393578 MAP3K5Q99683 1374 aa28.36■■■□□ 2.13
HMGA2-203ENST00000393578 NCAPD2Q15021 1401 aa28.36■■■□□ 2.13
HMGA2-203ENST00000393578 MRPL50Q8N5N7 158 aaKnown RBP28.36■■■□□ 2.13
HMGA2-203ENST00000393578 TCERG1O14776 1098 aaKnown RBP28.35■■■□□ 2.13
HMGA2-203ENST00000393578 ANKRD24Q8TF21 1146 aa28.35■■■□□ 2.13
HMGA2-203ENST00000393578 ARHGAP45Q92619 1136 aa28.35■■■□□ 2.13
HMGA2-203ENST00000393578 SPATA31A3Q5VYP0 1347 aa28.35■■■□□ 2.13
HMGA2-203ENST00000393578 LRRC37A3O60309 1634 aa28.35■■■□□ 2.13
HMGA2-203ENST00000393578 SLAIN2Q9P270 581 aa28.35■■■□□ 2.13
HMGA2-203ENST00000393578 LRRC59Q96AG4 307 aaKnown RBP28.34■■■□□ 2.13
HMGA2-203ENST00000393578 RGPD2P0DJD1 1756 aa28.34■■■□□ 2.13
HMGA2-203ENST00000393578 AXIN2Q9Y2T1 843 aa28.33■■■□□ 2.13
HMGA2-203ENST00000393578 ZC3H6P61129 1189 aaKnown RBP28.32■■■□□ 2.12
HMGA2-203ENST00000393578 DDX19BQ9UMR2 479 aa28.32■■■□□ 2.12
HMGA2-203ENST00000393578 CAMTA1Q9Y6Y1 1673 aa28.31■■■□□ 2.12
HMGA2-203ENST00000393578 TSPYL4Q9UJ04 414 aa28.3■■■□□ 2.12
HMGA2-203ENST00000393578 IGHDP01880 384 aa28.29■■■□□ 2.12
HMGA2-203ENST00000393578 ITPRIPQ8IWB1 547 aa28.29■■■□□ 2.12
HMGA2-203ENST00000393578 ERBB3P21860 1342 aa28.28■■■□□ 2.12
HMGA2-203ENST00000393578 TMEM57Q8N5G2 664 aa28.28■■■□□ 2.12
HMGA2-203ENST00000393578 IL17REQ8NFR9 667 aa28.28■■■□□ 2.12
HMGA2-203ENST00000393578 CRYBG1Q9Y4K1 1723 aa28.28■■■□□ 2.12
HMGA2-203ENST00000393578 BABAM1Q9NWV8 329 aa28.28■■■□□ 2.12
HMGA2-203ENST00000393578 ABCC6O95255 1503 aa28.27■■■□□ 2.12
HMGA2-203ENST00000393578 MIS18AQ9NYP9 233 aa28.27■■■□□ 2.12
HMGA2-203ENST00000393578 RGPD5Q99666 1765 aa28.26■■■□□ 2.12
HMGA2-203ENST00000393578 KRT24Q2M2I5 525 aa28.26■■■□□ 2.11
HMGA2-203ENST00000393578 AMOTQ4VCS5 1084 aa28.26■■■□□ 2.11
HMGA2-203ENST00000393578 PLEKHO1Q53GL0 409 aaPredicted RBP28.26■■■□□ 2.11
HMGA2-203ENST00000393578 PCDHB15Q9Y5E8 787 aa28.26■■■□□ 2.11
HMGA2-203ENST00000393578 SOS2Q07890 1332 aaPredicted RBP28.25■■■□□ 2.11
HMGA2-203ENST00000393578 CABLES1Q8TDN4 633 aa28.25■■■□□ 2.11
HMGA2-203ENST00000393578 COL18A1P39060 1754 aa28.24■■■□□ 2.11
HMGA2-203ENST00000393578 CEMIPQ8WUJ3 1361 aa28.24■■■□□ 2.11
HMGA2-203ENST00000393578 LMO7Q8WWI1 1683 aa28.23■■■□□ 2.11
HMGA2-203ENST00000393578 CPDO75976 1380 aa28.23■■■□□ 2.11
HMGA2-203ENST00000393578 TAF7Q15545 349 aaPredicted RBP28.23■■■□□ 2.11
HMGA2-203ENST00000393578 AKAP4Q5JQC9 854 aa28.22■■■□□ 2.11
HMGA2-203ENST00000393578 API5Q9BZZ5 524 aaKnown RBP28.22■■■□□ 2.11
HMGA2-203ENST00000393578 ABCC4O15439 1325 aa28.21■■■□□ 2.11
HMGA2-203ENST00000393578 RWDD1Q9H446 243 aaPredicted RBP28.2■■■□□ 2.11
HMGA2-203ENST00000393578 ZNF530Q6P9A1 599 aaPredicted RBP28.2■■■□□ 2.1
HMGA2-203ENST00000393578 ZBTB40Q9NUA8 1239 aa28.2■■■□□ 2.1
HMGA2-203ENST00000393578 CHMP4BQ9H444 224 aaKnown RBP28.19■■■□□ 2.1
HMGA2-203ENST00000393578 SKAP1Q86WV1 359 aa28.19■■■□□ 2.1
HMGA2-203ENST00000393578 SOS1Q07889 1333 aaPredicted RBP28.18■■■□□ 2.1
HMGA2-203ENST00000393578 FAM208AQ9UK61 1670 aaKnown RBP28.16■■■□□ 2.1
HMGA2-203ENST00000393578 C1orf141Q5JVX7 400 aa28.16■■■□□ 2.1
HMGA2-203ENST00000393578 NLRP2Q9NX02 1062 aa28.15■■■□□ 2.1
HMGA2-203ENST00000393578 NHSL1Q5SYE7 1610 aa28.15■■■□□ 2.1
HMGA2-203ENST00000393578 PTPRCP08575 1304 aa28.15■■■□□ 2.1
HMGA2-203ENST00000393578 OVOS2A0A0G2JMS6 1433 aa28.14■■■□□ 2.1
HMGA2-203ENST00000393578 CHRNA2Q15822 529 aa28.14■■■□□ 2.1
HMGA2-203ENST00000393578 LGR6Q9HBX8 967 aa28.14■■■□□ 2.1
HMGA2-203ENST00000393578 HDAC1Q13547 482 aaPredicted RBP28.13■■■□□ 2.09
HMGA2-203ENST00000393578 ZBTB7BO15156 539 aaPredicted RBP28.13■■■□□ 2.09
HMGA2-203ENST00000393578 PLEKHG2Q9H7P9 1386 aa28.12■■■□□ 2.09
HMGA2-203ENST00000393578 RAPGEF4Q8WZA2 1011 aa28.12■■■□□ 2.09
HMGA2-203ENST00000393578 SLC4A2P04920 1241 aa28.11■■■□□ 2.09
HMGA2-203ENST00000393578 CSB-PGBD3P0DP91 1061 aa28.11■■■□□ 2.09
HMGA2-203ENST00000393578 PDE4AP27815 886 aa28.1■■■□□ 2.09
HMGA2-203ENST00000393578 RGS12O14924 1447 aa28.1■■■□□ 2.09
HMGA2-203ENST00000393578 TEFQ10587 303 aa28.1■■■□□ 2.09
HMGA2-203ENST00000393578 MPRIPQ6WCQ1 1025 aa28.1■■■□□ 2.09
HMGA2-203ENST00000393578 RNMTO43148 476 aaKnown RBP28.09■■■□□ 2.09
HMGA2-203ENST00000393578 CCDC30Q5VVM6 783 aa28.08■■■□□ 2.09
HMGA2-203ENST00000393578 INTS3Q68E01 1043 aaKnown RBP28.08■■■□□ 2.09
HMGA2-203ENST00000393578 BACH2Q9BYV9 841 aa28.08■■■□□ 2.09
HMGA2-203ENST00000393578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.08■■■□□ 2.09
HMGA2-203ENST00000393578 TATP17735 454 aaPredicted RBP28.08■■■□□ 2.09
HMGA2-203ENST00000393578 STK31Q9BXU1 1019 aa28.08■■■□□ 2.09
HMGA2-203ENST00000393578 ABCA3Q99758 1704 aa28.07■■■□□ 2.08
HMGA2-203ENST00000393578 RGS3P49796 1198 aa28.07■■■□□ 2.08
HMGA2-203ENST00000393578 PRDM11Q9NQV5 511 aa28.07■■■□□ 2.08
HMGA2-203ENST00000393578 KDM3BQ7LBC6 1761 aa28.07■■■□□ 2.08
HMGA2-203ENST00000393578 ADAMTS7Q9UKP4 1686 aa28.05■■■□□ 2.08
HMGA2-203ENST00000393578 VIRMAQ69YN4 1812 aaKnown RBP28.04■■■□□ 2.08
HMGA2-203ENST00000393578 SPG7Q9UQ90 795 aa28.04■■■□□ 2.08
HMGA2-203ENST00000393578 LTBP4Q8N2S1 1624 aa28.04■■■□□ 2.08
HMGA2-203ENST00000393578 BTBD11A6QL63 1104 aa28.04■■■□□ 2.08
HMGA2-203ENST00000393578 MEGF6O75095 1541 aa28.03■■■□□ 2.08
HMGA2-203ENST00000393578 EIF4A1P60842 406 aaKnown RBP28.03■■■□□ 2.08
HMGA2-203ENST00000393578 HOXB7P09629 217 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms