RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 FLT4P35916 1363 aa25.36■■□□□ 1.65
PDLIM7-205ENST00000393551 EMILIN1Q9Y6C2 1016 aa25.36■■□□□ 1.65
PDLIM7-205ENST00000393551 ANKRD26Q9UPS8 1709 aa25.35■■□□□ 1.65
PDLIM7-205ENST00000393551 NSD2O96028 1365 aa25.35■■□□□ 1.65
PDLIM7-205ENST00000393551 KIF24Q5T7B8 1368 aa25.35■■□□□ 1.65
PDLIM7-205ENST00000393551 ZBTB7AO95365 584 aa25.35■■□□□ 1.65
PDLIM7-205ENST00000393551 PTGER2P43116 358 aa25.34■■□□□ 1.65
PDLIM7-205ENST00000393551 PRIM1P49642 420 aaKnown RBP25.34■■□□□ 1.65
PDLIM7-205ENST00000393551 MAP2P11137 1827 aaKnown RBP25.33■■□□□ 1.65
PDLIM7-205ENST00000393551 SMG6Q86US8 1419 aaKnown RBP25.33■■□□□ 1.65
PDLIM7-205ENST00000393551 HSPA5P11021 654 aaKnown RBP25.32■■□□□ 1.64
PDLIM7-205ENST00000393551 ZNF827Q17R98 1081 aa25.32■■□□□ 1.64
PDLIM7-205ENST00000393551 CCER1Q8TC90 406 aaPredicted RBP25.31■■□□□ 1.64
PDLIM7-205ENST00000393551 PPP1R1BQ9UD71 204 aaPredicted RBP25.31■■□□□ 1.64
PDLIM7-205ENST00000393551 ATF5Q9Y2D1 282 aaPredicted RBP25.31■■□□□ 1.64
PDLIM7-205ENST00000393551 LY75O60449 1722 aa25.31■■□□□ 1.64
PDLIM7-205ENST00000393551 SYTL4Q96C24 671 aaPredicted RBP25.3■■□□□ 1.64
PDLIM7-205ENST00000393551 CGNL1Q0VF96 1302 aa25.3■■□□□ 1.64
PDLIM7-205ENST00000393551 EIF4G2P78344 907 aaKnown RBP eCLIP25.29■■□□□ 1.64
PDLIM7-205ENST00000393551 RAPGEF4Q8WZA2 1011 aa25.29■■□□□ 1.64
PDLIM7-205ENST00000393551 POLR3GLQ9BT43 218 aa25.29■■□□□ 1.64
PDLIM7-205ENST00000393551 KCNQ4P56696 695 aa25.28■■□□□ 1.64
PDLIM7-205ENST00000393551 NCAPD2Q15021 1401 aa25.28■■□□□ 1.64
PDLIM7-205ENST00000393551 UTRNP46939 3433 aa25.27■■□□□ 1.64
PDLIM7-205ENST00000393551 AKT1S1Q96B36 256 aa25.27■■□□□ 1.64
PDLIM7-205ENST00000393551 SGIP1Q9BQI5 828 aa25.27■■□□□ 1.64
PDLIM7-205ENST00000393551 TATP17735 454 aaPredicted RBP25.26■■□□□ 1.63
PDLIM7-205ENST00000393551 PPM1GO15355 546 aaPredicted RBP25.25■■□□□ 1.63
PDLIM7-205ENST00000393551 SLC27A3Q5K4L6 730 aa25.25■■□□□ 1.63
PDLIM7-205ENST00000393551 POLKQ9UBT6 870 aa25.25■■□□□ 1.63
PDLIM7-205ENST00000393551 WASHC2AQ641Q2 1341 aa25.25■■□□□ 1.63
PDLIM7-205ENST00000393551 TUBGCP6Q96RT7 1819 aa25.25■■□□□ 1.63
PDLIM7-205ENST00000393551 QSER1Q2KHR3 1735 aa25.24■■□□□ 1.63
PDLIM7-205ENST00000393551 PKD1L3Q7Z443 1732 aa25.24■■□□□ 1.63
PDLIM7-205ENST00000393551 CYP27B1O15528 508 aa25.24■■□□□ 1.63
PDLIM7-205ENST00000393551 MTFR1LQ9H019 292 aa25.24■■□□□ 1.63
PDLIM7-205ENST00000393551 TOGARAM1Q9Y4F4 1720 aa25.23■■□□□ 1.63
PDLIM7-205ENST00000393551 PANK3Q9H999 370 aa25.22■■□□□ 1.63
PDLIM7-205ENST00000393551 PCDH11XQ9BZA7 1347 aa25.21■■□□□ 1.63
PDLIM7-205ENST00000393551 PCDH11YQ9BZA8 1340 aa25.21■■□□□ 1.63
PDLIM7-205ENST00000393551 EYA1Q99502 592 aa25.2■■□□□ 1.62
PDLIM7-205ENST00000393551 ITGB4P16144 1822 aa25.19■■□□□ 1.62
PDLIM7-205ENST00000393551 PNPLA7Q6ZV29 1317 aa25.19■■□□□ 1.62
PDLIM7-205ENST00000393551 TNNT2P45379 298 aaPredicted RBP25.19■■□□□ 1.62
PDLIM7-205ENST00000393551 FHDC1Q9C0D6 1143 aaPredicted RBP25.17■■□□□ 1.62
PDLIM7-205ENST00000393551 COL24A1Q17RW2 1714 aa25.17■■□□□ 1.62
PDLIM7-205ENST00000393551 CCNL1Q9UK58 526 aaPredicted RBP25.16■■□□□ 1.62
PDLIM7-205ENST00000393551 SYT17Q9BSW7 474 aa25.15■■□□□ 1.62
PDLIM7-205ENST00000393551 EIF4A2Q14240 407 aaKnown RBP25.14■■□□□ 1.62
PDLIM7-205ENST00000393551 NKX1-1Q15270 411 aaPredicted RBP25.13■■□□□ 1.61
PDLIM7-205ENST00000393551 MPRIPQ6WCQ1 1025 aa25.13■■□□□ 1.61
PDLIM7-205ENST00000393551 TFCP2L1Q9NZI6 479 aa25.13■■□□□ 1.61
PDLIM7-205ENST00000393551 TAF1LQ8IZX4 1826 aa25.13■■□□□ 1.61
PDLIM7-205ENST00000393551 GOLGB1Q14789 3259 aaKnown RBP25.12■■□□□ 1.61
PDLIM7-205ENST00000393551 ARXQ96QS3 562 aa25.12■■□□□ 1.61
PDLIM7-205ENST00000393551 C5P01031 1676 aa25.12■■□□□ 1.61
PDLIM7-205ENST00000393551 SLC16A10Q8TF71 515 aa25.1■■□□□ 1.61
PDLIM7-205ENST00000393551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.1■■□□□ 1.61
PDLIM7-205ENST00000393551 PALLDQ8WX93 1383 aa25.09■■□□□ 1.61
PDLIM7-205ENST00000393551 SPG7Q9UQ90 795 aa25.09■■□□□ 1.61
PDLIM7-205ENST00000393551 PIGBQ92521 554 aa25.08■■□□□ 1.61
PDLIM7-205ENST00000393551 COL23A1Q86Y22 540 aaPredicted RBP25.07■■□□□ 1.6
PDLIM7-205ENST00000393551 IGSF1Q8N6C5 1336 aa25.07■■□□□ 1.6
PDLIM7-205ENST00000393551 MAP3K5Q99683 1374 aa25.06■■□□□ 1.6
PDLIM7-205ENST00000393551 YY1P25490 414 aa25.06■■□□□ 1.6
PDLIM7-205ENST00000393551 PHKG2P15735 406 aa25.05■■□□□ 1.6
PDLIM7-205ENST00000393551 KIF7Q2M1P5 1343 aa25.05■■□□□ 1.6
PDLIM7-205ENST00000393551 DCAF8L1A6NGE4 600 aa25.03■■□□□ 1.6
PDLIM7-205ENST00000393551 MORC1Q86VD1 984 aa25.03■■□□□ 1.6
PDLIM7-205ENST00000393551 IFNL2Q8IZJ0 200 aa25.03■■□□□ 1.6
PDLIM7-205ENST00000393551 C4BP0C0L5 1744 aa25.03■■□□□ 1.6
PDLIM7-205ENST00000393551 AMER1Q5JTC6 1135 aaPredicted RBP25.02■■□□□ 1.6
PDLIM7-205ENST00000393551 AMIGO3Q86WK7 504 aa25.02■■□□□ 1.6
PDLIM7-205ENST00000393551 SMARCC1Q92922 1105 aaPredicted RBP25.01■■□□□ 1.59
PDLIM7-205ENST00000393551 KNSTRNQ9Y448 316 aa25■■□□□ 1.59
PDLIM7-205ENST00000393551 PLEKHG2Q9H7P9 1386 aa25■■□□□ 1.59
PDLIM7-205ENST00000393551 UBR3Q6ZT12 1888 aa25■■□□□ 1.59
PDLIM7-205ENST00000393551 POLD1P28340 1107 aa24.99■■□□□ 1.59
PDLIM7-205ENST00000393551 AEBP1Q8IUX7 1158 aa24.99■■□□□ 1.59
PDLIM7-205ENST00000393551 ASAP1Q9ULH1 1129 aa24.99■■□□□ 1.59
PDLIM7-205ENST00000393551 TMOD3Q9NYL9 352 aa24.98■■□□□ 1.59
PDLIM7-205ENST00000393551 MSH5O43196 834 aa24.97■■□□□ 1.59
PDLIM7-205ENST00000393551 SMIM5Q71RC9 77 aa24.97■■□□□ 1.59
PDLIM7-205ENST00000393551 LOC102724428A0A0B4J2F2 783 aa24.96■■□□□ 1.59
PDLIM7-205ENST00000393551 PER1O15534 1290 aaPredicted RBP24.96■■□□□ 1.59
PDLIM7-205ENST00000393551 SIK1P57059 783 aa24.96■■□□□ 1.59
PDLIM7-205ENST00000393551 MSL1Q68DK7 614 aa24.95■■□□□ 1.58
PDLIM7-205ENST00000393551 LINC00116Q8NCU8 138 aa24.95■■□□□ 1.58
PDLIM7-205ENST00000393551 ATG3Q9NT62 314 aa24.95■■□□□ 1.58
PDLIM7-205ENST00000393551 IL13P35225 146 aa24.94■■□□□ 1.58
PDLIM7-205ENST00000393551 ITPK1Q13572 414 aa24.94■■□□□ 1.58
PDLIM7-205ENST00000393551 KLHL34Q8N239 644 aa24.94■■□□□ 1.58
PDLIM7-205ENST00000393551 NLGN2Q8NFZ4 835 aa24.94■■□□□ 1.58
PDLIM7-205ENST00000393551 CHD4Q14839 1912 aa24.94■■□□□ 1.58
PDLIM7-205ENST00000393551 KDM6AO15550 1401 aaPredicted RBP24.94■■□□□ 1.58
PDLIM7-205ENST00000393551 PLEKHO1Q53GL0 409 aaPredicted RBP24.92■■□□□ 1.58
PDLIM7-205ENST00000393551 KDRP35968 1356 aa24.92■■□□□ 1.58
PDLIM7-205ENST00000393551 FLAD1Q8NFF5 587 aa24.91■■□□□ 1.58
PDLIM7-205ENST00000393551 AK7Q96M32 723 aa24.91■■□□□ 1.58
PDLIM7-205ENST00000393551 SLC4A9Q96Q91 983 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms