RNA–Protein interactions for RNA: ENST00000393238.7

TMCC1-201, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC1, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-201ENST00000393238 LRRCC1Q9C099 1032 aa11.22□□□□□ -0.61
TMCC1-201ENST00000393238 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
TMCC1-201ENST00000393238 SOGA3Q5TF21 947 aa11.22□□□□□ -0.61
TMCC1-201ENST00000393238 PDE3AQ14432 1141 aa11.22□□□□□ -0.61
TMCC1-201ENST00000393238 ZNF622Q969S3 477 aaKnown RBP eCLIP11.22□□□□□ -0.61
TMCC1-201ENST00000393238 PUS7Q96PZ0 661 aaKnown RBP11.22□□□□□ -0.61
TMCC1-201ENST00000393238 SMC3Q9UQE7 1217 aa11.22□□□□□ -0.61
TMCC1-201ENST00000393238 MPHOSPH10O00566 681 aaKnown RBP11.22□□□□□ -0.61
TMCC1-201ENST00000393238 LDHCP07864 332 aa11.21□□□□□ -0.61
TMCC1-201ENST00000393238 SLC4A3P48751 1232 aa11.21□□□□□ -0.61
TMCC1-201ENST00000393238 CRACR2BQ8N4Y2 399 aaPredicted RBP11.21□□□□□ -0.61
TMCC1-201ENST00000393238 PARP3Q9Y6F1 533 aa11.21□□□□□ -0.61
TMCC1-201ENST00000393238 SNRPA1P09661 255 aaKnown RBP11.21□□□□□ -0.61
TMCC1-201ENST00000393238 ZFYVE16Q7Z3T8 1539 aa11.21□□□□□ -0.62
TMCC1-201ENST00000393238 NYXQ9GZU5 481 aa11.21□□□□□ -0.62
TMCC1-201ENST00000393238 DUSP27Q5VZP5 1158 aa11.21□□□□□ -0.62
TMCC1-201ENST00000393238 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.62
TMCC1-201ENST00000393238 USHBP1Q8N6Y0 703 aa11.21□□□□□ -0.62
TMCC1-201ENST00000393238 HDAC9Q9UKV0 1011 aa11.21□□□□□ -0.62
TMCC1-201ENST00000393238 MTMR7Q9Y216 660 aa11.21□□□□□ -0.62
TMCC1-201ENST00000393238 RRP12Q5JTH9 1297 aaKnown RBP11.2□□□□□ -0.62
TMCC1-201ENST00000393238 NBPF6Q5VWK0 638 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 NBPF5PQ86XG9 351 aaPredicted RBP11.2□□□□□ -0.62
TMCC1-201ENST00000393238 NBPF4Q96M43 638 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 ARHGEF10O15013 1369 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 BAG6P46379 1132 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 TRIM22Q8IYM9 498 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 NOB1Q9ULX3 412 aaKnown RBP11.2□□□□□ -0.62
TMCC1-201ENST00000393238 SHANK2Q9UPX8 1470 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 CDK5RAP3Q96JB5 506 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 C6orf229H3BNL8 230 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 ATP6V1AP38606 617 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 TXLNAP40222 546 aa11.2□□□□□ -0.62
TMCC1-201ENST00000393238 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 GOLGA6L19H0YKK7 550 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
TMCC1-201ENST00000393238 SETDB2Q96T68 719 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 SLKQ9H2G2 1235 aaPredicted RBP11.19□□□□□ -0.62
TMCC1-201ENST00000393238 SPTY2D1Q68D10 685 aaPredicted RBP11.19□□□□□ -0.62
TMCC1-201ENST00000393238 LNPKQ9C0E8 428 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 SIL1Q9H173 461 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 TFCP2L1Q9NZI6 479 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 SRGAP3O43295 1099 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 TDO2P48775 406 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 RPAP2Q8IXW5 612 aaPredicted RBP11.19□□□□□ -0.62
TMCC1-201ENST00000393238 EXOC6Q8TAG9 804 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.19□□□□□ -0.62
TMCC1-201ENST00000393238 BECN2A8MW95 431 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 IPO7O95373 1038 aaKnown RBP11.19□□□□□ -0.62
TMCC1-201ENST00000393238 PPIP5K1Q6PFW1 1433 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 NF2P35240 595 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 MYD88Q99836 296 aa11.19□□□□□ -0.62
TMCC1-201ENST00000393238 FKBP4Q02790 459 aaKnown RBP eCLIP11.18□□□□□ -0.62
TMCC1-201ENST00000393238 RTCBQ9Y3I0 505 aaKnown RBP11.18□□□□□ -0.62
TMCC1-201ENST00000393238 USP5P45974 858 aa11.18□□□□□ -0.62
TMCC1-201ENST00000393238 RAB11FIP3O75154 756 aa11.18□□□□□ -0.62
TMCC1-201ENST00000393238 ANKRD1Q15327 319 aa11.18□□□□□ -0.62
TMCC1-201ENST00000393238 AACSQ86V21 672 aa11.18□□□□□ -0.62
TMCC1-201ENST00000393238 EMILIN1Q9Y6C2 1016 aa11.18□□□□□ -0.62
TMCC1-201ENST00000393238 TSR2Q969E8 191 aaKnown RBP11.18□□□□□ -0.62
TMCC1-201ENST00000393238 AIDAQ96BJ3 306 aa11.18□□□□□ -0.62
TMCC1-201ENST00000393238 PCMTD1Q96MG8 357 aaPredicted RBP11.18□□□□□ -0.62
TMCC1-201ENST00000393238 UBAC1Q9BSL1 405 aa11.18□□□□□ -0.62
TMCC1-201ENST00000393238 CCDC152Q4G0S7 254 aa11.17□□□□□ -0.62
TMCC1-201ENST00000393238 MCM2P49736 904 aa11.17□□□□□ -0.62
TMCC1-201ENST00000393238 RPRD2Q5VT52 1461 aaKnown RBP11.17□□□□□ -0.62
TMCC1-201ENST00000393238 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
TMCC1-201ENST00000393238 POLR3DP05423 398 aaPredicted RBP11.17□□□□□ -0.62
TMCC1-201ENST00000393238 SKOR2Q2VWA4 1001 aaPredicted RBP11.17□□□□□ -0.62
TMCC1-201ENST00000393238 PANK1Q8TE04 598 aa11.17□□□□□ -0.62
TMCC1-201ENST00000393238 CDKL5O76039 1030 aa11.17□□□□□ -0.62
TMCC1-201ENST00000393238 MAP3K12Q12852 859 aa11.17□□□□□ -0.62
TMCC1-201ENST00000393238 MPHOSPH6Q99547 160 aaKnown RBP11.17□□□□□ -0.62
TMCC1-201ENST00000393238 CWC25Q9NXE8 425 aaPredicted RBP11.17□□□□□ -0.62
TMCC1-201ENST00000393238 PCDH11XQ9BZA7 1347 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 PCDH11YQ9BZA8 1340 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 GSTO1P78417 241 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 TNIP1Q15025 636 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 CCDC73Q6ZRK6 1079 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 MCM10Q7L590 875 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 ABCF2Q9UG63 623 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 PDCP20941 246 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 ALDH1L2Q3SY69 923 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 ZNF772Q68DY9 489 aaPredicted RBP11.16□□□□□ -0.62
TMCC1-201ENST00000393238 DNAJC5Q9H3Z4 198 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 FOXD4L1Q9NU39 408 aa11.16□□□□□ -0.62
TMCC1-201ENST00000393238 AKAP4Q5JQC9 854 aa11.15□□□□□ -0.62
TMCC1-201ENST00000393238 JDP2Q8WYK2 163 aa11.15□□□□□ -0.62
TMCC1-201ENST00000393238 DNAAF4Q8WXU2 420 aa11.15□□□□□ -0.62
TMCC1-201ENST00000393238 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
TMCC1-201ENST00000393238 NLRP3Q96P20 1036 aa11.15□□□□□ -0.62
TMCC1-201ENST00000393238 DNAI2Q9GZS0 605 aa11.15□□□□□ -0.62
TMCC1-201ENST00000393238 BAG3O95817 575 aa11.15□□□□□ -0.62
TMCC1-201ENST00000393238 BICD2Q8TD16 824 aa11.15□□□□□ -0.62
TMCC1-201ENST00000393238 EHMT1Q9H9B1 1298 aa11.15□□□□□ -0.62
TMCC1-201ENST00000393238 IDH1O75874 414 aaKnown RBP11.15□□□□□ -0.63
TMCC1-201ENST00000393238 KRT32Q14532 448 aa11.15□□□□□ -0.63
TMCC1-201ENST00000393238 ZGPATQ8N5A5 531 aaKnown RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms