RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 DIAPH1O60610 1272 aaKnown RBP9.1□□□□□ -0.95
UBBP1-201ENST00000392399 IL13P35225 146 aa9.1□□□□□ -0.95
UBBP1-201ENST00000392399 PDE3BQ13370 1112 aa9.1□□□□□ -0.95
UBBP1-201ENST00000392399 DDB1Q16531 1140 aa9.1□□□□□ -0.95
UBBP1-201ENST00000392399 KRT27Q7Z3Y8 459 aa9.1□□□□□ -0.95
UBBP1-201ENST00000392399 RAPGEF4Q8WZA2 1011 aa9.1□□□□□ -0.95
UBBP1-201ENST00000392399 EYA1Q99502 592 aa9.1□□□□□ -0.95
UBBP1-201ENST00000392399 RGS12O14924 1447 aa9.1□□□□□ -0.95
UBBP1-201ENST00000392399 FAM208AQ9UK61 1670 aaKnown RBP9.1□□□□□ -0.95
UBBP1-201ENST00000392399 PEAK1Q9H792 1746 aa9.09□□□□□ -0.95
UBBP1-201ENST00000392399 PRKRIP1Q9H875 184 aaPredicted RBP9.09□□□□□ -0.95
UBBP1-201ENST00000392399 NUDCQ9Y266 331 aa9.09□□□□□ -0.95
UBBP1-201ENST00000392399 PLEKHG2Q9H7P9 1386 aa9.09□□□□□ -0.95
UBBP1-201ENST00000392399 IGSF1Q8N6C5 1336 aa9.08□□□□□ -0.96
UBBP1-201ENST00000392399 DISP2A7MBM2 1401 aa9.08□□□□□ -0.96
UBBP1-201ENST00000392399 TATP17735 454 aaPredicted RBP9.08□□□□□ -0.96
UBBP1-201ENST00000392399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.08□□□□□ -0.96
UBBP1-201ENST00000392399 MYBBP1AQ9BQG0 1328 aaKnown RBP9.07□□□□□ -0.96
UBBP1-201ENST00000392399 NCAPD2Q15021 1401 aa9.07□□□□□ -0.96
UBBP1-201ENST00000392399 ANP32CO43423 234 aa9.07□□□□□ -0.96
UBBP1-201ENST00000392399 FAM196AQ6ZSG2 479 aa9.07□□□□□ -0.96
UBBP1-201ENST00000392399 CCDC125Q86Z20 511 aa9.07□□□□□ -0.96
UBBP1-201ENST00000392399 ZCRB1Q8TBF4 217 aaKnown RBP9.07□□□□□ -0.96
UBBP1-201ENST00000392399 THSD7AQ9UPZ6 1657 aa9.07□□□□□ -0.96
UBBP1-201ENST00000392399 SOCS7O14512 581 aa9.06□□□□□ -0.96
UBBP1-201ENST00000392399 CHRDL2Q6WN34 429 aa9.06□□□□□ -0.96
UBBP1-201ENST00000392399 USHBP1Q8N6Y0 703 aa9.06□□□□□ -0.96
UBBP1-201ENST00000392399 SPG7Q9UQ90 795 aa9.06□□□□□ -0.96
UBBP1-201ENST00000392399 EP400Q96L91 3159 aa9.06□□□□□ -0.96
UBBP1-201ENST00000392399 KDRP35968 1356 aa9.05□□□□□ -0.96
UBBP1-201ENST00000392399 AMOTQ4VCS5 1084 aa9.05□□□□□ -0.96
UBBP1-201ENST00000392399 SULT6B1Q6IMI4 303 aa9.05□□□□□ -0.96
UBBP1-201ENST00000392399 PARP4Q9UKK3 1724 aaKnown RBP9.05□□□□□ -0.96
UBBP1-201ENST00000392399 OVOS2A0A0G2JMS6 1433 aa9.05□□□□□ -0.96
UBBP1-201ENST00000392399 BCL9O00512 1426 aa9.05□□□□□ -0.96
UBBP1-201ENST00000392399 TNS2Q63HR2 1409 aa9.05□□□□□ -0.96
UBBP1-201ENST00000392399 U2SURPO15042 1029 aaKnown RBP9.04□□□□□ -0.96
UBBP1-201ENST00000392399 FCHSD2O94868 740 aa9.04□□□□□ -0.96
UBBP1-201ENST00000392399 PLEKHO1Q53GL0 409 aaPredicted RBP9.04□□□□□ -0.96
UBBP1-201ENST00000392399 MARCH10Q8NA82 808 aaPredicted RBP9.04□□□□□ -0.96
UBBP1-201ENST00000392399 PNNQ9H307 717 aaKnown RBP9.04□□□□□ -0.96
UBBP1-201ENST00000392399 COL3A1P02461 1466 aaPredicted RBP9.03□□□□□ -0.96
UBBP1-201ENST00000392399 DDX54Q8TDD1 881 aaKnown RBP9.03□□□□□ -0.96
UBBP1-201ENST00000392399 UPF1Q92900 1129 aaKnown RBP eCLIP9.03□□□□□ -0.96
UBBP1-201ENST00000392399 PCDH11XQ9BZA7 1347 aa9.03□□□□□ -0.96
UBBP1-201ENST00000392399 PCDH11YQ9BZA8 1340 aa9.03□□□□□ -0.96
UBBP1-201ENST00000392399 MEGF6O75095 1541 aa9.02□□□□□ -0.97
UBBP1-201ENST00000392399 HMOX1P09601 288 aa9.02□□□□□ -0.97
UBBP1-201ENST00000392399 U2AF1L5P0DN76 240 aaPredicted RBP9.02□□□□□ -0.97
UBBP1-201ENST00000392399 U2AF1Q01081 240 aaKnown RBP eCLIP9.02□□□□□ -0.97
UBBP1-201ENST00000392399 SF3B2Q13435 895 aaKnown RBP9.02□□□□□ -0.97
UBBP1-201ENST00000392399 NKX1-1Q15270 411 aaPredicted RBP9.02□□□□□ -0.97
UBBP1-201ENST00000392399 AEBP1Q8IUX7 1158 aa9.02□□□□□ -0.97
UBBP1-201ENST00000392399 IFNL2Q8IZJ0 200 aa9.02□□□□□ -0.97
UBBP1-201ENST00000392399 BRWD3Q6RI45 1802 aa9.02□□□□□ -0.97
UBBP1-201ENST00000392399 RGPD2P0DJD1 1756 aa9.01□□□□□ -0.97
UBBP1-201ENST00000392399 NEFMP07197 916 aa9.01□□□□□ -0.97
UBBP1-201ENST00000392399 HSP90AB1P08238 724 aaKnown RBP9.01□□□□□ -0.97
UBBP1-201ENST00000392399 FAM182BQ5T319 152 aa9.01□□□□□ -0.97
UBBP1-201ENST00000392399 LRRC37A3O60309 1634 aa9.01□□□□□ -0.97
UBBP1-201ENST00000392399 WNK3Q9BYP7 1800 aa9.01□□□□□ -0.97
UBBP1-201ENST00000392399 RGPD1P0DJD0 1748 aa9□□□□□ -0.97
UBBP1-201ENST00000392399 CYP27B1O15528 508 aa9□□□□□ -0.97
UBBP1-201ENST00000392399 PHKG2P15735 406 aa9□□□□□ -0.97
UBBP1-201ENST00000392399 C1orf141Q5JVX7 400 aa9□□□□□ -0.97
UBBP1-201ENST00000392399 REM2Q8IYK8 340 aaPredicted RBP9□□□□□ -0.97
UBBP1-201ENST00000392399 BCL11BQ9C0K0 894 aaPredicted RBP9□□□□□ -0.97
UBBP1-201ENST00000392399 RSPH6AQ9H0K4 717 aa9□□□□□ -0.97
UBBP1-201ENST00000392399 TRIM37O94972 964 aa8.99□□□□□ -0.97
UBBP1-201ENST00000392399 WDR43Q15061 677 aaKnown RBP eCLIP8.99□□□□□ -0.97
UBBP1-201ENST00000392399 AKAP4Q5JQC9 854 aa8.99□□□□□ -0.97
UBBP1-201ENST00000392399 ZNF530Q6P9A1 599 aaPredicted RBP8.99□□□□□ -0.97
UBBP1-201ENST00000392399 GAS2L2Q8NHY3 880 aa8.99□□□□□ -0.97
UBBP1-201ENST00000392399 DCAF5Q96JK2 942 aa8.99□□□□□ -0.97
UBBP1-201ENST00000392399 PLSCR1O15162 318 aa8.98□□□□□ -0.97
UBBP1-201ENST00000392399 PRKAR2BP31323 418 aa8.98□□□□□ -0.97
UBBP1-201ENST00000392399 BAG6P46379 1132 aa8.98□□□□□ -0.97
UBBP1-201ENST00000392399 SPDYE2BA6NHP3 402 aa8.97□□□□□ -0.97
UBBP1-201ENST00000392399 ERVV-2B6SEH9 535 aa8.97□□□□□ -0.97
UBBP1-201ENST00000392399 APBA3O96018 575 aa8.97□□□□□ -0.97
UBBP1-201ENST00000392399 SPDYE6P0CI01 402 aa8.97□□□□□ -0.97
UBBP1-201ENST00000392399 HMGB2P26583 209 aaKnown RBP8.97□□□□□ -0.97
UBBP1-201ENST00000392399 PRIM1P49642 420 aaKnown RBP8.97□□□□□ -0.97
UBBP1-201ENST00000392399 MTHFSDQ2M296 383 aaKnown RBP8.97□□□□□ -0.97
UBBP1-201ENST00000392399 SPDYE2Q495Y8 402 aa8.97□□□□□ -0.97
UBBP1-201ENST00000392399 DIEXFQ68CQ4 756 aaKnown RBP8.97□□□□□ -0.97
UBBP1-201ENST00000392399 PKD1L3Q7Z443 1732 aa8.97□□□□□ -0.97
UBBP1-201ENST00000392399 GNAT3A8MTJ3 354 aa8.96□□□□□ -0.98
UBBP1-201ENST00000392399 KCNQ2O43526 872 aa8.96□□□□□ -0.98
UBBP1-201ENST00000392399 HTATSF1O43719 755 aaKnown RBP8.96□□□□□ -0.98
UBBP1-201ENST00000392399 MKRN4PQ13434 485 aaPredicted RBP8.96□□□□□ -0.98
UBBP1-201ENST00000392399 ACSBG1Q96GR2 724 aa8.96□□□□□ -0.98
UBBP1-201ENST00000392399 PHACTR3Q96KR7 559 aa8.96□□□□□ -0.98
UBBP1-201ENST00000392399 PLEKHF1Q96S99 279 aa8.96□□□□□ -0.98
UBBP1-201ENST00000392399 MRS2Q9HD23 443 aa8.96□□□□□ -0.98
UBBP1-201ENST00000392399 ADAMTS8Q9UP79 889 aa8.96□□□□□ -0.98
UBBP1-201ENST00000392399 PNISRQ8TF01 805 aaKnown RBP8.95□□□□□ -0.98
UBBP1-201ENST00000392399 SYTL4Q96C24 671 aaPredicted RBP8.95□□□□□ -0.98
UBBP1-201ENST00000392399 MAPK8IP3Q9UPT6 1336 aa8.95□□□□□ -0.98
UBBP1-201ENST00000392399 KAT6BQ8WYB5 2073 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms