RNA–Protein interactions for RNA: ENST00000392008.6

COPS8-202, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 2 BASIC

Gene COPS8, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-202ENST00000392008 NCAPD2Q15021 1401 aa23.34■■□□□ 1.33
COPS8-202ENST00000392008 KCNQ2O43526 872 aa23.34■■□□□ 1.33
COPS8-202ENST00000392008 EZH2Q15910 746 aaKnown RBP23.34■■□□□ 1.33
COPS8-202ENST00000392008 BCL11BQ9C0K0 894 aaPredicted RBP23.33■■□□□ 1.33
COPS8-202ENST00000392008 SBF2Q86WG5 1849 aa23.32■■□□□ 1.32
COPS8-202ENST00000392008 IL13P35225 146 aa23.31■■□□□ 1.32
COPS8-202ENST00000392008 DDX10Q13206 875 aaKnown RBP23.31■■□□□ 1.32
COPS8-202ENST00000392008 CAMKK2Q96RR4 588 aa23.31■■□□□ 1.32
COPS8-202ENST00000392008 IGSF1Q8N6C5 1336 aa23.31■■□□□ 1.32
COPS8-202ENST00000392008 SHANK3Q9BYB0 1731 aa23.29■■□□□ 1.32
COPS8-202ENST00000392008 AEBP1Q8IUX7 1158 aa23.27■■□□□ 1.32
COPS8-202ENST00000392008 PCDH11XQ9BZA7 1347 aa23.26■■□□□ 1.31
COPS8-202ENST00000392008 PCDH11YQ9BZA8 1340 aa23.26■■□□□ 1.31
COPS8-202ENST00000392008 CYP27B1O15528 508 aa23.25■■□□□ 1.31
COPS8-202ENST00000392008 SULT6B1Q6IMI4 303 aa23.25■■□□□ 1.31
COPS8-202ENST00000392008 DIAPH1O60610 1272 aaKnown RBP23.24■■□□□ 1.31
COPS8-202ENST00000392008 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
COPS8-202ENST00000392008 SYTL4Q96C24 671 aaPredicted RBP23.24■■□□□ 1.31
COPS8-202ENST00000392008 SPG7Q9UQ90 795 aa23.24■■□□□ 1.31
COPS8-202ENST00000392008 PLSCR1O15162 318 aa23.23■■□□□ 1.31
COPS8-202ENST00000392008 PRIM1P49642 420 aaKnown RBP23.23■■□□□ 1.31
COPS8-202ENST00000392008 NHSQ6T4R5 1651 aa23.23■■□□□ 1.31
COPS8-202ENST00000392008 PARD3Q8TEW0 1356 aa23.21■■□□□ 1.31
COPS8-202ENST00000392008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.21■■□□□ 1.31
COPS8-202ENST00000392008 KAT6BQ8WYB5 2073 aa23.21■■□□□ 1.31
COPS8-202ENST00000392008 PKD1L3Q7Z443 1732 aa23.21■■□□□ 1.31
COPS8-202ENST00000392008 HMOX1P09601 288 aa23.2■■□□□ 1.3
COPS8-202ENST00000392008 COL3A1P02461 1466 aaPredicted RBP23.19■■□□□ 1.3
COPS8-202ENST00000392008 PROM2Q8N271 834 aa23.19■■□□□ 1.3
COPS8-202ENST00000392008 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
COPS8-202ENST00000392008 KDRP35968 1356 aa23.18■■□□□ 1.3
COPS8-202ENST00000392008 PSDA5PKW4 1024 aaPredicted RBP23.17■■□□□ 1.3
COPS8-202ENST00000392008 U2SURPO15042 1029 aaKnown RBP23.17■■□□□ 1.3
COPS8-202ENST00000392008 PHKG2P15735 406 aa23.17■■□□□ 1.3
COPS8-202ENST00000392008 PLEKHO1Q53GL0 409 aaPredicted RBP23.17■■□□□ 1.3
COPS8-202ENST00000392008 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
COPS8-202ENST00000392008 RREB1Q92766 1687 aa23.17■■□□□ 1.3
COPS8-202ENST00000392008 TXNRD1Q16881 649 aa23.16■■□□□ 1.3
COPS8-202ENST00000392008 CFAP53Q96M91 514 aa23.16■■□□□ 1.3
COPS8-202ENST00000392008 BTAF1O14981 1849 aa23.16■■□□□ 1.3
COPS8-202ENST00000392008 R3HDM1Q15032 1099 aaKnown RBP23.15■■□□□ 1.3
COPS8-202ENST00000392008 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
COPS8-202ENST00000392008 NUP188Q5SRE5 1749 aa23.14■■□□□ 1.29
COPS8-202ENST00000392008 AMOTQ4VCS5 1084 aa23.13■■□□□ 1.29
COPS8-202ENST00000392008 ZNF530Q6P9A1 599 aaPredicted RBP23.13■■□□□ 1.29
COPS8-202ENST00000392008 MPRIPQ6WCQ1 1025 aa23.13■■□□□ 1.29
COPS8-202ENST00000392008 PLEKHG2Q9H7P9 1386 aa23.12■■□□□ 1.29
COPS8-202ENST00000392008 RGPD3A6NKT7 1758 aaPredicted RBP23.12■■□□□ 1.29
COPS8-202ENST00000392008 RGPD4Q7Z3J3 1758 aa23.12■■□□□ 1.29
COPS8-202ENST00000392008 NBPF14Q5TI25 921 aa23.11■■□□□ 1.29
COPS8-202ENST00000392008 TOGARAM1Q9Y4F4 1720 aa23.11■■□□□ 1.29
COPS8-202ENST00000392008 SRCAPQ6ZRS2 3230 aa23.1■■□□□ 1.29
COPS8-202ENST00000392008 ZNF316A6NFI3 1004 aaPredicted RBP23.1■■□□□ 1.29
COPS8-202ENST00000392008 RALBP1Q15311 655 aa23.09■■□□□ 1.29
COPS8-202ENST00000392008 ANO8Q9HCE9 1232 aaPredicted RBP23.09■■□□□ 1.29
COPS8-202ENST00000392008 KCNQ4P56696 695 aa23.08■■□□□ 1.29
COPS8-202ENST00000392008 C1orf141Q5JVX7 400 aa23.08■■□□□ 1.29
COPS8-202ENST00000392008 PIGBQ92521 554 aa23.08■■□□□ 1.29
COPS8-202ENST00000392008 LRRC4BQ9NT99 713 aa23.08■■□□□ 1.29
COPS8-202ENST00000392008 NUDCQ9Y266 331 aa23.08■■□□□ 1.29
COPS8-202ENST00000392008 HSP90AB1P08238 724 aaKnown RBP23.06■■□□□ 1.28
COPS8-202ENST00000392008 U2AF1L5P0DN76 240 aaPredicted RBP23.06■■□□□ 1.28
COPS8-202ENST00000392008 U2AF1Q01081 240 aaKnown RBP eCLIP23.06■■□□□ 1.28
COPS8-202ENST00000392008 MTHFSDQ2M296 383 aaKnown RBP23.06■■□□□ 1.28
COPS8-202ENST00000392008 DCAF5Q96JK2 942 aa23.06■■□□□ 1.28
COPS8-202ENST00000392008 TMOD3Q9NYL9 352 aa23.06■■□□□ 1.28
COPS8-202ENST00000392008 KDM6AO15550 1401 aaPredicted RBP23.05■■□□□ 1.28
COPS8-202ENST00000392008 ITGB4P16144 1822 aa23.04■■□□□ 1.28
COPS8-202ENST00000392008 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
COPS8-202ENST00000392008 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
COPS8-202ENST00000392008 SLC27A3Q5K4L6 730 aa23.03■■□□□ 1.28
COPS8-202ENST00000392008 RSPH6AQ9H0K4 717 aa23.03■■□□□ 1.28
COPS8-202ENST00000392008 CCNL1Q9UK58 526 aaPredicted RBP23.02■■□□□ 1.28
COPS8-202ENST00000392008 PALLDQ8WX93 1383 aa23.02■■□□□ 1.28
COPS8-202ENST00000392008 ERVV-2B6SEH9 535 aa23.01■■□□□ 1.27
COPS8-202ENST00000392008 STK32BQ9NY57 414 aa23.01■■□□□ 1.27
COPS8-202ENST00000392008 SLC15A2Q16348 729 aa23■■□□□ 1.27
COPS8-202ENST00000392008 PHACTR3Q96KR7 559 aa23■■□□□ 1.27
COPS8-202ENST00000392008 ASAP1Q9ULH1 1129 aa23■■□□□ 1.27
COPS8-202ENST00000392008 MYBBP1AQ9BQG0 1328 aaKnown RBP23■■□□□ 1.27
COPS8-202ENST00000392008 CABP4P57796 275 aa23■■□□□ 1.27
COPS8-202ENST00000392008 LGR6Q9HBX8 967 aa23■■□□□ 1.27
COPS8-202ENST00000392008 LY75O60449 1722 aa22.99■■□□□ 1.27
COPS8-202ENST00000392008 PRKRIP1Q9H875 184 aaPredicted RBP22.99■■□□□ 1.27
COPS8-202ENST00000392008 ZNF827Q17R98 1081 aa22.98■■□□□ 1.27
COPS8-202ENST00000392008 SMARCC1Q92922 1105 aaPredicted RBP22.98■■□□□ 1.27
COPS8-202ENST00000392008 FCHSD2O94868 740 aa22.97■■□□□ 1.27
COPS8-202ENST00000392008 NFATC2IPQ8NCF5 419 aa22.97■■□□□ 1.27
COPS8-202ENST00000392008 PDGFDQ9GZP0 370 aaPredicted RBP22.97■■□□□ 1.27
COPS8-202ENST00000392008 ATG3Q9NT62 314 aa22.97■■□□□ 1.27
COPS8-202ENST00000392008 PAPPAQ13219 1627 aa22.97■■□□□ 1.27
COPS8-202ENST00000392008 GAS2L2Q8NHY3 880 aa22.96■■□□□ 1.27
COPS8-202ENST00000392008 RNMTO43148 476 aaKnown RBP22.95■■□□□ 1.26
COPS8-202ENST00000392008 AKT1S1Q96B36 256 aa22.94■■□□□ 1.26
COPS8-202ENST00000392008 LOC102724428A0A0B4J2F2 783 aa22.93■■□□□ 1.26
COPS8-202ENST00000392008 SIK1P57059 783 aa22.93■■□□□ 1.26
COPS8-202ENST00000392008 GNAT3A8MTJ3 354 aa22.92■■□□□ 1.26
COPS8-202ENST00000392008 SLC52A2Q9HAB3 445 aa22.92■■□□□ 1.26
COPS8-202ENST00000392008 MAP3K5Q99683 1374 aa22.92■■□□□ 1.26
COPS8-202ENST00000392008 SCN11AQ9UI33 1791 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms