RNA–Protein interactions for RNA: ENST00000391839.6

COX20-202, Transcript of cytochrome c oxidase assembly factor COX20, humanhuman

TSL 1 (best)

Gene COX20, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX20-202ENST00000391839 SHANK3Q9BYB0 1731 aa20.61■□□□□ 0.89
COX20-202ENST00000391839 DDX54Q8TDD1 881 aaKnown RBP20.6■□□□□ 0.89
COX20-202ENST00000391839 ARXQ96QS3 562 aa20.6■□□□□ 0.89
COX20-202ENST00000391839 ZNF784Q8NCA9 323 aaPredicted RBP20.59■□□□□ 0.89
COX20-202ENST00000391839 IP6K1Q92551 441 aa20.59■□□□□ 0.89
COX20-202ENST00000391839 LY75O60449 1722 aa20.57■□□□□ 0.88
COX20-202ENST00000391839 SYTL4Q96C24 671 aaPredicted RBP20.57■□□□□ 0.88
COX20-202ENST00000391839 KCNQ4P56696 695 aa20.56■□□□□ 0.88
COX20-202ENST00000391839 KLHL34Q8N239 644 aa20.56■□□□□ 0.88
COX20-202ENST00000391839 MAP3K19Q56UN5 1328 aa20.55■□□□□ 0.88
COX20-202ENST00000391839 MEGF6O75095 1541 aa20.55■□□□□ 0.88
COX20-202ENST00000391839 AKT1S1Q96B36 256 aa20.55■□□□□ 0.88
COX20-202ENST00000391839 COG3Q96JB2 828 aa20.55■□□□□ 0.88
COX20-202ENST00000391839 MAP3K5Q99683 1374 aa20.55■□□□□ 0.88
COX20-202ENST00000391839 COL24A1Q17RW2 1714 aa20.54■□□□□ 0.88
COX20-202ENST00000391839 FBLN1P23142 703 aa20.54■□□□□ 0.88
COX20-202ENST00000391839 HOXC9P31274 260 aa20.54■□□□□ 0.88
COX20-202ENST00000391839 AMPHP49418 695 aa20.53■□□□□ 0.88
COX20-202ENST00000391839 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
COX20-202ENST00000391839 PUS7Q96PZ0 661 aaKnown RBP20.53■□□□□ 0.88
COX20-202ENST00000391839 TESK2Q96S53 571 aa20.53■□□□□ 0.88
COX20-202ENST00000391839 ANKRD36BQ8N2N9 1353 aa20.53■□□□□ 0.88
COX20-202ENST00000391839 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
COX20-202ENST00000391839 NSD2O96028 1365 aa20.52■□□□□ 0.88
COX20-202ENST00000391839 PRIM1P49642 420 aaKnown RBP20.52■□□□□ 0.88
COX20-202ENST00000391839 ST20-MTHFSA0A0A6YYL1 179 aa20.51■□□□□ 0.87
COX20-202ENST00000391839 MYCNP04198 464 aaPredicted RBP20.51■□□□□ 0.87
COX20-202ENST00000391839 TFCP2L1Q9NZI6 479 aa20.51■□□□□ 0.87
COX20-202ENST00000391839 KIF20BQ96Q89 1820 aa20.49■□□□□ 0.87
COX20-202ENST00000391839 POLD1P28340 1107 aa20.49■□□□□ 0.87
COX20-202ENST00000391839 GPR162Q16538 588 aa20.49■□□□□ 0.87
COX20-202ENST00000391839 RTL1A6NKG5 1358 aa20.48■□□□□ 0.87
COX20-202ENST00000391839 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
COX20-202ENST00000391839 USHBP1Q8N6Y0 703 aa20.48■□□□□ 0.87
COX20-202ENST00000391839 ZCRB1Q8TBF4 217 aaKnown RBP20.48■□□□□ 0.87
COX20-202ENST00000391839 SLC16A10Q8TF71 515 aa20.48■□□□□ 0.87
COX20-202ENST00000391839 GOLGB1Q14789 3259 aaKnown RBP20.47■□□□□ 0.87
COX20-202ENST00000391839 RRS1Q15050 365 aaKnown RBP20.47■□□□□ 0.87
COX20-202ENST00000391839 C5P01031 1676 aa20.46■□□□□ 0.87
COX20-202ENST00000391839 CCNL1Q9UK58 526 aaPredicted RBP20.46■□□□□ 0.87
COX20-202ENST00000391839 SMG6Q86US8 1419 aaKnown RBP20.45■□□□□ 0.86
COX20-202ENST00000391839 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
COX20-202ENST00000391839 NBPF6Q5VWK0 638 aa20.44■□□□□ 0.86
COX20-202ENST00000391839 NLGN2Q8NFZ4 835 aa20.44■□□□□ 0.86
COX20-202ENST00000391839 NBPF4Q96M43 638 aa20.44■□□□□ 0.86
COX20-202ENST00000391839 SPINK5Q9NQ38 1064 aaPredicted RBP20.44■□□□□ 0.86
COX20-202ENST00000391839 USP47Q96K76 1375 aa20.44■□□□□ 0.86
COX20-202ENST00000391839 SENP3-EIF4A1A0A087X0R7 540 aa20.41■□□□□ 0.86
COX20-202ENST00000391839 RAPGEF4Q8WZA2 1011 aa20.41■□□□□ 0.86
COX20-202ENST00000391839 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
COX20-202ENST00000391839 TAF1LQ8IZX4 1826 aa20.41■□□□□ 0.86
COX20-202ENST00000391839 FYB1O15117 783 aa20.4■□□□□ 0.86
COX20-202ENST00000391839 MSL1Q68DK7 614 aa20.4■□□□□ 0.86
COX20-202ENST00000391839 C1QTNF8P60827 252 aa20.39■□□□□ 0.85
COX20-202ENST00000391839 COL23A1Q86Y22 540 aaPredicted RBP20.39■□□□□ 0.85
COX20-202ENST00000391839 CGNL1Q0VF96 1302 aa20.38■□□□□ 0.85
COX20-202ENST00000391839 TATP17735 454 aaPredicted RBP20.38■□□□□ 0.85
COX20-202ENST00000391839 TMF1P82094 1093 aa20.38■□□□□ 0.85
COX20-202ENST00000391839 ITGB4P16144 1822 aa20.38■□□□□ 0.85
COX20-202ENST00000391839 FLT4P35916 1363 aa20.37■□□□□ 0.85
COX20-202ENST00000391839 PCDH11XQ9BZA7 1347 aa20.37■□□□□ 0.85
COX20-202ENST00000391839 PCDH11YQ9BZA8 1340 aa20.37■□□□□ 0.85
COX20-202ENST00000391839 SLC24A1O60721 1099 aa20.37■□□□□ 0.85
COX20-202ENST00000391839 HSP90AB2PQ58FF8 381 aa20.37■□□□□ 0.85
COX20-202ENST00000391839 PKD1L3Q7Z443 1732 aa20.36■□□□□ 0.85
COX20-202ENST00000391839 INSRP06213 1382 aa20.36■□□□□ 0.85
COX20-202ENST00000391839 PALLDQ8WX93 1383 aa20.36■□□□□ 0.85
COX20-202ENST00000391839 YBX3P16989 372 aaKnown RBP eCLIP20.35■□□□□ 0.85
COX20-202ENST00000391839 C4BP0C0L5 1744 aa20.35■□□□□ 0.85
COX20-202ENST00000391839 GIGYF1O75420 1035 aaPredicted RBP20.34■□□□□ 0.85
COX20-202ENST00000391839 MPRIPQ6WCQ1 1025 aa20.33■□□□□ 0.85
COX20-202ENST00000391839 ANKRD26Q9UPS8 1709 aa20.32■□□□□ 0.84
COX20-202ENST00000391839 UBR3Q6ZT12 1888 aa20.31■□□□□ 0.84
COX20-202ENST00000391839 NSD3Q9BZ95 1437 aa20.31■□□□□ 0.84
COX20-202ENST00000391839 CYP27B1O15528 508 aa20.31■□□□□ 0.84
COX20-202ENST00000391839 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
COX20-202ENST00000391839 EMILIN1Q9Y6C2 1016 aa20.31■□□□□ 0.84
COX20-202ENST00000391839 KIF24Q5T7B8 1368 aa20.3■□□□□ 0.84
COX20-202ENST00000391839 PPM1GO15355 546 aaPredicted RBP20.28■□□□□ 0.84
COX20-202ENST00000391839 GRIN3BO60391 1043 aa20.28■□□□□ 0.84
COX20-202ENST00000391839 CAPN15O75808 1086 aa20.27■□□□□ 0.84
COX20-202ENST00000391839 PHF14O94880 888 aa20.27■□□□□ 0.84
COX20-202ENST00000391839 CDCA8Q53HL2 280 aa20.27■□□□□ 0.84
COX20-202ENST00000391839 AMIGO3Q86WK7 504 aa20.27■□□□□ 0.84
COX20-202ENST00000391839 AK7Q96M32 723 aa20.27■□□□□ 0.84
COX20-202ENST00000391839 CARD14Q9BXL6 1004 aa20.27■□□□□ 0.84
COX20-202ENST00000391839 MAP2P11137 1827 aaKnown RBP20.27■□□□□ 0.84
COX20-202ENST00000391839 NCAPD2Q15021 1401 aa20.27■□□□□ 0.83
COX20-202ENST00000391839 SMIM5Q71RC9 77 aa20.26■□□□□ 0.83
COX20-202ENST00000391839 FLAD1Q8NFF5 587 aa20.26■□□□□ 0.83
COX20-202ENST00000391839 ATP10DQ9P241 1426 aa20.26■□□□□ 0.83
COX20-202ENST00000391839 SMARCC1Q92922 1105 aaPredicted RBP20.25■□□□□ 0.83
COX20-202ENST00000391839 CEP350Q5VT06 3117 aa20.24■□□□□ 0.83
COX20-202ENST00000391839 PIGBQ92521 554 aa20.24■□□□□ 0.83
COX20-202ENST00000391839 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
COX20-202ENST00000391839 WWC3Q9ULE0 1092 aa20.23■□□□□ 0.83
COX20-202ENST00000391839 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.21■□□□□ 0.83
COX20-202ENST00000391839 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
COX20-202ENST00000391839 HMGB2P26583 209 aaKnown RBP20.2■□□□□ 0.82
COX20-202ENST00000391839 LINC00116Q8NCU8 138 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms