RNA–Protein interactions for RNA: ENST00000390735.2

MIR550A3-201, Transcript of microRNA 550a-3, humanhuman

BASIC

Gene MIR550A3, Length 95 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR550A3-201ENST00000390735 CCNL1Q9UK58 526 aaPredicted RBP7.5□□□□□ -1.21
MIR550A3-201ENST00000390735 DDX54Q8TDD1 881 aaKnown RBP7.49□□□□□ -1.21
MIR550A3-201ENST00000390735 DCAF11Q8TEB1 546 aa7.49□□□□□ -1.21
MIR550A3-201ENST00000390735 SYTL4Q96C24 671 aaPredicted RBP7.49□□□□□ -1.21
MIR550A3-201ENST00000390735 STAC3Q96MF2 364 aa7.49□□□□□ -1.21
MIR550A3-201ENST00000390735 CABP1Q9NZU7 370 aa7.49□□□□□ -1.21
MIR550A3-201ENST00000390735 ANKRD36BQ8N2N9 1353 aa7.48□□□□□ -1.21
MIR550A3-201ENST00000390735 CABP2Q9NPB3 220 aa7.48□□□□□ -1.21
MIR550A3-201ENST00000390735 ERBB3P21860 1342 aa7.48□□□□□ -1.21
MIR550A3-201ENST00000390735 QRICH2Q9H0J4 1663 aa7.47□□□□□ -1.21
MIR550A3-201ENST00000390735 NFAT5O94916 1531 aa7.47□□□□□ -1.21
MIR550A3-201ENST00000390735 NSD2O96028 1365 aa7.47□□□□□ -1.21
MIR550A3-201ENST00000390735 HMGB2P26583 209 aaKnown RBP7.47□□□□□ -1.21
MIR550A3-201ENST00000390735 ARHGAP27Q6ZUM4 889 aa7.47□□□□□ -1.21
MIR550A3-201ENST00000390735 C5P01031 1676 aa7.47□□□□□ -1.21
MIR550A3-201ENST00000390735 USP54Q70EL1 1684 aa7.47□□□□□ -1.21
MIR550A3-201ENST00000390735 KDM2BQ8NHM5 1336 aa7.47□□□□□ -1.21
MIR550A3-201ENST00000390735 DOT1LQ8TEK3 1739 aa7.47□□□□□ -1.21
MIR550A3-201ENST00000390735 SMC1BQ8NDV3 1235 aa7.46□□□□□ -1.22
MIR550A3-201ENST00000390735 TTC21BQ7Z4L5 1316 aa7.46□□□□□ -1.22
MIR550A3-201ENST00000390735 USP47Q96K76 1375 aa7.46□□□□□ -1.22
MIR550A3-201ENST00000390735 C10orf71Q711Q0 1435 aa7.45□□□□□ -1.22
MIR550A3-201ENST00000390735 FAM161AQ3B820 660 aa7.45□□□□□ -1.22
MIR550A3-201ENST00000390735 ANKRD24Q8TF21 1146 aa7.45□□□□□ -1.22
MIR550A3-201ENST00000390735 ZNF692Q9BU19 519 aaPredicted RBP7.45□□□□□ -1.22
MIR550A3-201ENST00000390735 RRAGCQ9HB90 399 aa7.45□□□□□ -1.22
MIR550A3-201ENST00000390735 BCS1LQ9Y276 419 aa7.45□□□□□ -1.22
MIR550A3-201ENST00000390735 TTC21AQ8NDW8 1320 aa7.45□□□□□ -1.22
MIR550A3-201ENST00000390735 TAF1LQ8IZX4 1826 aa7.45□□□□□ -1.22
MIR550A3-201ENST00000390735 PLEKHG2Q9H7P9 1386 aa7.45□□□□□ -1.22
MIR550A3-201ENST00000390735 KCPQ6ZWJ8 1503 aa7.44□□□□□ -1.22
MIR550A3-201ENST00000390735 KIF13BQ9NQT8 1826 aa7.44□□□□□ -1.22
MIR550A3-201ENST00000390735 C9orf131Q5VYM1 1079 aa7.44□□□□□ -1.22
MIR550A3-201ENST00000390735 KIAA1551Q9HCM1 1747 aa7.44□□□□□ -1.22
MIR550A3-201ENST00000390735 LTN1O94822 1766 aa7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 N4BP2Q86UW6 1770 aaPredicted RBP7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 PXDNLA1KZ92 1463 aa7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 A0A0G2JLW4 131 aa7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 TGFB2P61812 414 aa7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 AMIGO3Q86WK7 504 aa7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 PRDM10Q9NQV6 1147 aa7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 TNRC6CQ9HCJ0 1690 aaKnown RBP7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 CENPJQ9HC77 1338 aaPredicted RBP7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 PKD1L3Q7Z443 1732 aa7.43□□□□□ -1.22
MIR550A3-201ENST00000390735 C4BP0C0L5 1744 aa7.42□□□□□ -1.22
MIR550A3-201ENST00000390735 KIAA1210Q9ULL0 1709 aa7.42□□□□□ -1.22
MIR550A3-201ENST00000390735 TOGARAM1Q9Y4F4 1720 aa7.42□□□□□ -1.22
MIR550A3-201ENST00000390735 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.42□□□□□ -1.22
MIR550A3-201ENST00000390735 SMIM5Q71RC9 77 aa7.42□□□□□ -1.22
MIR550A3-201ENST00000390735 AK7Q96M32 723 aa7.42□□□□□ -1.22
MIR550A3-201ENST00000390735 UBR3Q6ZT12 1888 aa7.42□□□□□ -1.22
MIR550A3-201ENST00000390735 BRCA1P38398 1863 aaKnown RBP7.41□□□□□ -1.22
MIR550A3-201ENST00000390735 FOXN1O15353 648 aa7.41□□□□□ -1.22
MIR550A3-201ENST00000390735 FCHSD2O94868 740 aa7.41□□□□□ -1.22
MIR550A3-201ENST00000390735 PHF14O94880 888 aa7.41□□□□□ -1.22
MIR550A3-201ENST00000390735 ZCRB1Q8TBF4 217 aaKnown RBP7.41□□□□□ -1.22
MIR550A3-201ENST00000390735 NSD3Q9BZ95 1437 aa7.41□□□□□ -1.22
MIR550A3-201ENST00000390735 ARFGEF1Q9Y6D6 1849 aa7.41□□□□□ -1.22
MIR550A3-201ENST00000390735 MMP10P09238 476 aa7.4□□□□□ -1.22
MIR550A3-201ENST00000390735 SSFA2P28290 1259 aa7.4□□□□□ -1.22
MIR550A3-201ENST00000390735 MLLT1Q03111 559 aaPredicted RBP7.4□□□□□ -1.22
MIR550A3-201ENST00000390735 NBPF1Q3BBV0 1214 aa7.4□□□□□ -1.22
MIR550A3-201ENST00000390735 RNF181Q9P0P0 153 aa7.4□□□□□ -1.22
MIR550A3-201ENST00000390735 USP31Q70CQ4 1352 aa7.4□□□□□ -1.22
MIR550A3-201ENST00000390735 PALLDQ8WX93 1383 aa7.4□□□□□ -1.22
MIR550A3-201ENST00000390735 FAM208AQ9UK61 1670 aaKnown RBP7.4□□□□□ -1.23
MIR550A3-201ENST00000390735 SBF1O95248 1867 aa7.39□□□□□ -1.23
MIR550A3-201ENST00000390735 KTN1Q86UP2 1357 aaKnown RBP7.39□□□□□ -1.23
MIR550A3-201ENST00000390735 EVC2Q86UK5 1308 aa7.39□□□□□ -1.23
MIR550A3-201ENST00000390735 VEGFAP15692 232 aaPredicted RBP7.39□□□□□ -1.23
MIR550A3-201ENST00000390735 DPEP1P16444 411 aa7.39□□□□□ -1.23
MIR550A3-201ENST00000390735 CTCFP49711 727 aaPredicted RBP7.39□□□□□ -1.23
MIR550A3-201ENST00000390735 RGS19P49795 217 aa7.39□□□□□ -1.23
MIR550A3-201ENST00000390735 ABHD8Q96I13 439 aa7.39□□□□□ -1.23
MIR550A3-201ENST00000390735 KCNA3P22001 575 aa7.38□□□□□ -1.23
MIR550A3-201ENST00000390735 IP6K1Q92551 441 aa7.38□□□□□ -1.23
MIR550A3-201ENST00000390735 LTV1Q96GA3 475 aaPredicted RBP7.38□□□□□ -1.23
MIR550A3-201ENST00000390735 DCAF5Q96JK2 942 aa7.38□□□□□ -1.23
MIR550A3-201ENST00000390735 MKRN1Q9UHC7 482 aaKnown RBP7.38□□□□□ -1.23
MIR550A3-201ENST00000390735 ZC3H4Q9UPT8 1303 aaKnown RBP7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 MPRIPQ6WCQ1 1025 aa7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 NME9Q86XW9 330 aa7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 NLGN1Q8N2Q7 840 aa7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 SMARCC1Q92922 1105 aaPredicted RBP7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 AIDAQ96BJ3 306 aa7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 CREBZFQ9NS37 354 aa7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 CCDC87Q9NVE4 849 aa7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 PIM2Q9P1W9 311 aa7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 MON2Q7Z3U7 1717 aa7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 MEGF6O75095 1541 aa7.37□□□□□ -1.23
MIR550A3-201ENST00000390735 RGPD2P0DJD1 1756 aa7.36□□□□□ -1.23
MIR550A3-201ENST00000390735 GLTPD2A6NH11 291 aa7.36□□□□□ -1.23
MIR550A3-201ENST00000390735 LBX1P52954 281 aa7.36□□□□□ -1.23
MIR550A3-201ENST00000390735 DALRD3Q5D0E6 543 aaKnown RBP7.36□□□□□ -1.23
MIR550A3-201ENST00000390735 ITGB4P16144 1822 aa7.36□□□□□ -1.23
MIR550A3-201ENST00000390735 CGNL1Q0VF96 1302 aa7.35□□□□□ -1.23
MIR550A3-201ENST00000390735 GNPATO15228 680 aa7.35□□□□□ -1.23
MIR550A3-201ENST00000390735 TMF1P82094 1093 aa7.35□□□□□ -1.23
MIR550A3-201ENST00000390735 LINC00116Q8NCU8 138 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms