RNA–Protein interactions for RNA: ENST00000390606.3

IGHV3-20-201, Transcript of immunoglobulin heavy variable 3-20, humanhuman

APPRIS P1 BASIC

Gene IGHV3-20, Length 415 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-20-201ENST00000390606 DDX54Q8TDD1 881 aaKnown RBP29.92■■■□□ 2.38
IGHV3-20-201ENST00000390606 SHANK3Q9BYB0 1731 aa29.92■■■□□ 2.38
IGHV3-20-201ENST00000390606 BCL11BQ9C0K0 894 aaPredicted RBP29.92■■■□□ 2.38
IGHV3-20-201ENST00000390606 IGSF1Q8N6C5 1336 aa29.91■■■□□ 2.38
IGHV3-20-201ENST00000390606 CAMKK2Q96RR4 588 aa29.9■■■□□ 2.38
IGHV3-20-201ENST00000390606 EZH2Q15910 746 aaKnown RBP29.88■■■□□ 2.37
IGHV3-20-201ENST00000390606 KCNQ2O43526 872 aa29.87■■■□□ 2.37
IGHV3-20-201ENST00000390606 IL13P35225 146 aa29.87■■■□□ 2.37
IGHV3-20-201ENST00000390606 ACSBG1Q96GR2 724 aa29.86■■■□□ 2.37
IGHV3-20-201ENST00000390606 PARD3Q8TEW0 1356 aa29.84■■■□□ 2.37
IGHV3-20-201ENST00000390606 NHSQ6T4R5 1651 aa29.84■■■□□ 2.37
IGHV3-20-201ENST00000390606 PKD1L3Q7Z443 1732 aa29.83■■■□□ 2.37
IGHV3-20-201ENST00000390606 PCDH11XQ9BZA7 1347 aa29.82■■■□□ 2.36
IGHV3-20-201ENST00000390606 PCDH11YQ9BZA8 1340 aa29.82■■■□□ 2.36
IGHV3-20-201ENST00000390606 PLSCR1O15162 318 aa29.82■■■□□ 2.36
IGHV3-20-201ENST00000390606 CYP27B1O15528 508 aa29.82■■■□□ 2.36
IGHV3-20-201ENST00000390606 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.81■■■□□ 2.36
IGHV3-20-201ENST00000390606 COL3A1P02461 1466 aaPredicted RBP29.8■■■□□ 2.36
IGHV3-20-201ENST00000390606 PLEKHG2Q9H7P9 1386 aa29.79■■■□□ 2.36
IGHV3-20-201ENST00000390606 DDX10Q13206 875 aaKnown RBP29.79■■■□□ 2.36
IGHV3-20-201ENST00000390606 AEBP1Q8IUX7 1158 aa29.79■■■□□ 2.36
IGHV3-20-201ENST00000390606 SPG7Q9UQ90 795 aa29.78■■■□□ 2.36
IGHV3-20-201ENST00000390606 KDRP35968 1356 aa29.77■■■□□ 2.36
IGHV3-20-201ENST00000390606 PPP2R1AP30153 589 aa29.77■■■□□ 2.36
IGHV3-20-201ENST00000390606 RGPD3A6NKT7 1758 aaPredicted RBP29.77■■■□□ 2.36
IGHV3-20-201ENST00000390606 RGPD4Q7Z3J3 1758 aa29.77■■■□□ 2.36
IGHV3-20-201ENST00000390606 RREB1Q92766 1687 aa29.76■■■□□ 2.36
IGHV3-20-201ENST00000390606 SULT6B1Q6IMI4 303 aa29.76■■■□□ 2.35
IGHV3-20-201ENST00000390606 KAT6BQ8WYB5 2073 aa29.75■■■□□ 2.35
IGHV3-20-201ENST00000390606 DIAPH1O60610 1272 aaKnown RBP29.75■■■□□ 2.35
IGHV3-20-201ENST00000390606 DOT1LQ8TEK3 1739 aa29.74■■■□□ 2.35
IGHV3-20-201ENST00000390606 PRIM1P49642 420 aaKnown RBP29.74■■■□□ 2.35
IGHV3-20-201ENST00000390606 PROM2Q8N271 834 aa29.74■■■□□ 2.35
IGHV3-20-201ENST00000390606 NKX1-1Q15270 411 aaPredicted RBP29.73■■■□□ 2.35
IGHV3-20-201ENST00000390606 BTAF1O14981 1849 aa29.73■■■□□ 2.35
IGHV3-20-201ENST00000390606 NUP188Q5SRE5 1749 aa29.71■■■□□ 2.35
IGHV3-20-201ENST00000390606 PHKG2P15735 406 aa29.7■■■□□ 2.35
IGHV3-20-201ENST00000390606 SYTL4Q96C24 671 aaPredicted RBP29.7■■■□□ 2.35
IGHV3-20-201ENST00000390606 PLEKHO1Q53GL0 409 aaPredicted RBP29.69■■■□□ 2.34
IGHV3-20-201ENST00000390606 TXNRD1Q16881 649 aa29.68■■■□□ 2.34
IGHV3-20-201ENST00000390606 IFNL2Q8IZJ0 200 aa29.68■■■□□ 2.34
IGHV3-20-201ENST00000390606 HMOX1P09601 288 aa29.67■■■□□ 2.34
IGHV3-20-201ENST00000390606 TOGARAM1Q9Y4F4 1720 aa29.67■■■□□ 2.34
IGHV3-20-201ENST00000390606 AMOTQ4VCS5 1084 aa29.66■■■□□ 2.34
IGHV3-20-201ENST00000390606 CFAP53Q96M91 514 aa29.66■■■□□ 2.34
IGHV3-20-201ENST00000390606 PSDA5PKW4 1024 aaPredicted RBP29.63■■■□□ 2.33
IGHV3-20-201ENST00000390606 ZNF530Q6P9A1 599 aaPredicted RBP29.63■■■□□ 2.33
IGHV3-20-201ENST00000390606 U2SURPO15042 1029 aaKnown RBP29.62■■■□□ 2.33
IGHV3-20-201ENST00000390606 R3HDM1Q15032 1099 aaKnown RBP29.62■■■□□ 2.33
IGHV3-20-201ENST00000390606 RALBP1Q15311 655 aa29.6■■■□□ 2.33
IGHV3-20-201ENST00000390606 NBPF14Q5TI25 921 aa29.6■■■□□ 2.33
IGHV3-20-201ENST00000390606 ANO8Q9HCE9 1232 aaPredicted RBP29.6■■■□□ 2.33
IGHV3-20-201ENST00000390606 MPRIPQ6WCQ1 1025 aa29.59■■■□□ 2.33
IGHV3-20-201ENST00000390606 ITGB4P16144 1822 aa29.58■■■□□ 2.33
IGHV3-20-201ENST00000390606 HSP90AB1P08238 724 aaKnown RBP29.57■■■□□ 2.32
IGHV3-20-201ENST00000390606 PIGBQ92521 554 aa29.57■■■□□ 2.32
IGHV3-20-201ENST00000390606 LRRC4BQ9NT99 713 aa29.57■■■□□ 2.32
IGHV3-20-201ENST00000390606 KDM6AO15550 1401 aaPredicted RBP29.56■■■□□ 2.32
IGHV3-20-201ENST00000390606 ZNF316A6NFI3 1004 aaPredicted RBP29.56■■■□□ 2.32
IGHV3-20-201ENST00000390606 DCAF5Q96JK2 942 aa29.56■■■□□ 2.32
IGHV3-20-201ENST00000390606 NUDCQ9Y266 331 aa29.56■■■□□ 2.32
IGHV3-20-201ENST00000390606 C1orf141Q5JVX7 400 aa29.55■■■□□ 2.32
IGHV3-20-201ENST00000390606 SLC27A3Q5K4L6 730 aa29.54■■■□□ 2.32
IGHV3-20-201ENST00000390606 LY75O60449 1722 aa29.54■■■□□ 2.32
IGHV3-20-201ENST00000390606 MTHFSDQ2M296 383 aaKnown RBP29.53■■■□□ 2.32
IGHV3-20-201ENST00000390606 PAPPAQ13219 1627 aa29.53■■■□□ 2.32
IGHV3-20-201ENST00000390606 ERVV-2B6SEH9 535 aa29.52■■■□□ 2.32
IGHV3-20-201ENST00000390606 RSPH6AQ9H0K4 717 aa29.52■■■□□ 2.32
IGHV3-20-201ENST00000390606 TMOD3Q9NYL9 352 aa29.52■■■□□ 2.32
IGHV3-20-201ENST00000390606 AKAP4Q5JQC9 854 aa29.51■■■□□ 2.31
IGHV3-20-201ENST00000390606 PALLDQ8WX93 1383 aa29.51■■■□□ 2.31
IGHV3-20-201ENST00000390606 U2AF1L5P0DN76 240 aaPredicted RBP29.5■■■□□ 2.31
IGHV3-20-201ENST00000390606 KCNQ4P56696 695 aa29.5■■■□□ 2.31
IGHV3-20-201ENST00000390606 U2AF1Q01081 240 aaKnown RBP eCLIP29.5■■■□□ 2.31
IGHV3-20-201ENST00000390606 PRKAR2BP31323 418 aa29.48■■■□□ 2.31
IGHV3-20-201ENST00000390606 SLC15A2Q16348 729 aa29.48■■■□□ 2.31
IGHV3-20-201ENST00000390606 SMARCC1Q92922 1105 aaPredicted RBP29.48■■■□□ 2.31
IGHV3-20-201ENST00000390606 CCNL1Q9UK58 526 aaPredicted RBP29.48■■■□□ 2.31
IGHV3-20-201ENST00000390606 MYBBP1AQ9BQG0 1328 aaKnown RBP29.47■■■□□ 2.31
IGHV3-20-201ENST00000390606 STK32BQ9NY57 414 aa29.47■■■□□ 2.31
IGHV3-20-201ENST00000390606 PRKRIP1Q9H875 184 aaPredicted RBP29.46■■■□□ 2.31
IGHV3-20-201ENST00000390606 ASAP1Q9ULH1 1129 aa29.46■■■□□ 2.31
IGHV3-20-201ENST00000390606 FCHSD2O94868 740 aa29.45■■■□□ 2.31
IGHV3-20-201ENST00000390606 ZNF827Q17R98 1081 aa29.45■■■□□ 2.31
IGHV3-20-201ENST00000390606 PHACTR3Q96KR7 559 aa29.45■■■□□ 2.31
IGHV3-20-201ENST00000390606 ATG3Q9NT62 314 aa29.45■■■□□ 2.31
IGHV3-20-201ENST00000390606 CABP4P57796 275 aa29.44■■■□□ 2.3
IGHV3-20-201ENST00000390606 AKT1S1Q96B36 256 aa29.43■■■□□ 2.3
IGHV3-20-201ENST00000390606 LGR6Q9HBX8 967 aa29.43■■■□□ 2.3
IGHV3-20-201ENST00000390606 SCN11AQ9UI33 1791 aa29.43■■■□□ 2.3
IGHV3-20-201ENST00000390606 RNMTO43148 476 aaKnown RBP29.42■■■□□ 2.3
IGHV3-20-201ENST00000390606 GAS2L2Q8NHY3 880 aa29.42■■■□□ 2.3
IGHV3-20-201ENST00000390606 ADAMTS7Q9UKP4 1686 aa29.4■■■□□ 2.3
IGHV3-20-201ENST00000390606 NFATC2IPQ8NCF5 419 aa29.4■■■□□ 2.3
IGHV3-20-201ENST00000390606 PDGFDQ9GZP0 370 aaPredicted RBP29.4■■■□□ 2.3
IGHV3-20-201ENST00000390606 MRC1P22897 1456 aa29.39■■■□□ 2.3
IGHV3-20-201ENST00000390606 LOC102724428A0A0B4J2F2 783 aa29.38■■■□□ 2.29
IGHV3-20-201ENST00000390606 SIK1P57059 783 aa29.38■■■□□ 2.29
IGHV3-20-201ENST00000390606 CASZ1Q86V15 1759 aa29.38■■■□□ 2.29
IGHV3-20-201ENST00000390606 MAP3K5Q99683 1374 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms