RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 RTF1Q92541 710 aaKnown RBP15.77■□□□□ 0.12
SPTBN1-203ENST00000389980 B4GALNT3Q6L9W6 998 aa15.77■□□□□ 0.11
SPTBN1-203ENST00000389980 CAMTA1Q9Y6Y1 1673 aa15.76■□□□□ 0.11
SPTBN1-203ENST00000389980 GNAT3A8MTJ3 354 aa15.76■□□□□ 0.11
SPTBN1-203ENST00000389980 NCAPD2Q15021 1401 aa15.76■□□□□ 0.11
SPTBN1-203ENST00000389980 ELL2O00472 640 aaPredicted RBP15.76■□□□□ 0.11
SPTBN1-203ENST00000389980 TSPYL6Q8N831 410 aa15.76■□□□□ 0.11
SPTBN1-203ENST00000389980 FRAT1Q92837 279 aaPredicted RBP15.76■□□□□ 0.11
SPTBN1-203ENST00000389980 CRBNQ96SW2 442 aa15.76■□□□□ 0.11
SPTBN1-203ENST00000389980 MIS18AQ9NYP9 233 aa15.76■□□□□ 0.11
SPTBN1-203ENST00000389980 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.75■□□□□ 0.11
SPTBN1-203ENST00000389980 CRB1P82279 1406 aa15.75■□□□□ 0.11
SPTBN1-203ENST00000389980 AHDC1Q5TGY3 1603 aaPredicted RBP15.75■□□□□ 0.11
SPTBN1-203ENST00000389980 LMO7Q8WWI1 1683 aa15.74■□□□□ 0.11
SPTBN1-203ENST00000389980 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
SPTBN1-203ENST00000389980 IL17REQ8NFR9 667 aa15.74■□□□□ 0.11
SPTBN1-203ENST00000389980 C8orf58Q8NAV2 365 aa15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 FAM208AQ9UK61 1670 aaKnown RBP15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 CHL1O00533 1208 aa15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 TOM1O60784 492 aa15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 CANXP27824 592 aaKnown RBP15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 KRT24Q2M2I5 525 aa15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 PLEKHO1Q53GL0 409 aaPredicted RBP15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 ZNF530Q6P9A1 599 aaPredicted RBP15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 TNNQ9UQP3 1299 aa15.73■□□□□ 0.11
SPTBN1-203ENST00000389980 PHLPP1O60346 1717 aa15.72■□□□□ 0.11
SPTBN1-203ENST00000389980 ABCC6O95255 1503 aa15.72■□□□□ 0.11
SPTBN1-203ENST00000389980 CT47B1P0C2W7 299 aaPredicted RBP15.72■□□□□ 0.11
SPTBN1-203ENST00000389980 TSHZ2Q9NRE2 1034 aa15.72■□□□□ 0.11
SPTBN1-203ENST00000389980 SMC4Q9NTJ3 1288 aa15.72■□□□□ 0.11
SPTBN1-203ENST00000389980 UBAP1LF5GYI3 381 aa15.72■□□□□ 0.11
SPTBN1-203ENST00000389980 HTATSF1O43719 755 aaKnown RBP15.72■□□□□ 0.11
SPTBN1-203ENST00000389980 RAPGEF4Q8WZA2 1011 aa15.71■□□□□ 0.11
SPTBN1-203ENST00000389980 LGR6Q9HBX8 967 aa15.71■□□□□ 0.11
SPTBN1-203ENST00000389980 TCERG1O14776 1098 aaKnown RBP15.7■□□□□ 0.1
SPTBN1-203ENST00000389980 VAMP4O75379 141 aa15.7■□□□□ 0.1
SPTBN1-203ENST00000389980 STRN4Q9NRL3 753 aa15.7■□□□□ 0.1
SPTBN1-203ENST00000389980 TWISTNBQ3B726 338 aaPredicted RBP15.7■□□□□ 0.1
SPTBN1-203ENST00000389980 AMOTQ4VCS5 1084 aa15.7■□□□□ 0.1
SPTBN1-203ENST00000389980 MPRIPQ6WCQ1 1025 aa15.7■□□□□ 0.1
SPTBN1-203ENST00000389980 PANK1Q8TE04 598 aa15.7■□□□□ 0.1
SPTBN1-203ENST00000389980 MEGF6O75095 1541 aa15.7■□□□□ 0.1
SPTBN1-203ENST00000389980 LRRC37A3O60309 1634 aa15.7■□□□□ 0.1
SPTBN1-203ENST00000389980 VIRMAQ69YN4 1812 aaKnown RBP15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 COL5A2P05997 1499 aaPredicted RBP15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 TOM1L2Q6ZVM7 507 aa15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 BCL11AQ9H165 835 aa15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 TSPYL4Q9UJ04 414 aa15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 COL16A1Q07092 1604 aaPredicted RBP15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 WDR17Q8IZU2 1322 aa15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 AKAP4Q5JQC9 854 aa15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 CLUAP1Q96AJ1 413 aa15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 CCDC136Q96JN2 1154 aa15.69■□□□□ 0.1
SPTBN1-203ENST00000389980 RLBP1P12271 317 aa15.68■□□□□ 0.1
SPTBN1-203ENST00000389980 TATP17735 454 aaPredicted RBP15.68■□□□□ 0.1
SPTBN1-203ENST00000389980 C1orf141Q5JVX7 400 aa15.68■□□□□ 0.1
SPTBN1-203ENST00000389980 LARP1Q6PKG0 1096 aaKnown RBP15.68■□□□□ 0.1
SPTBN1-203ENST00000389980 EVA1CP58658 441 aa15.67■□□□□ 0.1
SPTBN1-203ENST00000389980 COL22A1Q8NFW1 1626 aaPredicted RBP15.67■□□□□ 0.1
SPTBN1-203ENST00000389980 BTG4Q9NY30 223 aa15.66■□□□□ 0.1
SPTBN1-203ENST00000389980 NOB1Q9ULX3 412 aaKnown RBP15.66■□□□□ 0.1
SPTBN1-203ENST00000389980 COG6Q9Y2V7 657 aa15.66■□□□□ 0.1
SPTBN1-203ENST00000389980 CEMIPQ8WUJ3 1361 aa15.66■□□□□ 0.1
SPTBN1-203ENST00000389980 PDE3AQ14432 1141 aa15.66■□□□□ 0.1
SPTBN1-203ENST00000389980 TAF7Q15545 349 aaPredicted RBP15.66■□□□□ 0.1
SPTBN1-203ENST00000389980 ALDH1L2Q3SY69 923 aa15.66■□□□□ 0.1
SPTBN1-203ENST00000389980 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
SPTBN1-203ENST00000389980 ADAMTS2O95450 1211 aa15.65■□□□□ 0.1
SPTBN1-203ENST00000389980 ZKSCAN2Q63HK3 967 aa15.65■□□□□ 0.1
SPTBN1-203ENST00000389980 USP35Q9P2H5 1018 aa15.65■□□□□ 0.1
SPTBN1-203ENST00000389980 NUTM2BA6NNL0 878 aaPredicted RBP15.63■□□□□ 0.09
SPTBN1-203ENST00000389980 NUTM2EB1AL46 878 aaPredicted RBP15.63■□□□□ 0.09
SPTBN1-203ENST00000389980 TRIM27P14373 513 aa15.63■□□□□ 0.09
SPTBN1-203ENST00000389980 NUTM2AQ8IVF1 878 aaPredicted RBP15.63■□□□□ 0.09
SPTBN1-203ENST00000389980 MRPL50Q8N5N7 158 aaKnown RBP15.63■□□□□ 0.09
SPTBN1-203ENST00000389980 SPG7Q9UQ90 795 aa15.63■□□□□ 0.09
SPTBN1-203ENST00000389980 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
SPTBN1-203ENST00000389980 TEFQ10587 303 aa15.62■□□□□ 0.09
SPTBN1-203ENST00000389980 CARD10Q9BWT7 1032 aa15.62■□□□□ 0.09
SPTBN1-203ENST00000389980 COL14A1Q05707 1796 aaKnown RBP15.62■□□□□ 0.09
SPTBN1-203ENST00000389980 CYP27B1O15528 508 aa15.62■□□□□ 0.09
SPTBN1-203ENST00000389980 KCNQ3O43525 872 aa15.62■□□□□ 0.09
SPTBN1-203ENST00000389980 PHKG2P15735 406 aa15.62■□□□□ 0.09
SPTBN1-203ENST00000389980 ATF7IPQ6VMQ6 1270 aa15.62■□□□□ 0.09
SPTBN1-203ENST00000389980 CERKQ8TCT0 537 aa15.62■□□□□ 0.09
SPTBN1-203ENST00000389980 PKD1L3Q7Z443 1732 aa15.61■□□□□ 0.09
SPTBN1-203ENST00000389980 FTSJ3Q8IY81 847 aaKnown RBP15.61■□□□□ 0.09
SPTBN1-203ENST00000389980 DZIP1LQ8IYY4 767 aaKnown RBP15.61■□□□□ 0.09
SPTBN1-203ENST00000389980 KIF16BQ96L93 1317 aa15.61■□□□□ 0.09
SPTBN1-203ENST00000389980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.6■□□□□ 0.092e-21■□□□□ 10.5
SPTBN1-203ENST00000389980 OVOS2A0A0G2JMS6 1433 aa15.6■□□□□ 0.09
SPTBN1-203ENST00000389980 IFNL2Q8IZJ0 200 aa15.6■□□□□ 0.09
SPTBN1-203ENST00000389980 KDM6AO15550 1401 aaPredicted RBP15.59■□□□□ 0.09
SPTBN1-203ENST00000389980 BTBD11A6QL63 1104 aa15.59■□□□□ 0.09
SPTBN1-203ENST00000389980 BRPF1P55201 1214 aaPredicted RBP15.59■□□□□ 0.09
SPTBN1-203ENST00000389980 NECTIN2Q92692 538 aa15.59■□□□□ 0.09
SPTBN1-203ENST00000389980 SCN11AQ9UI33 1791 aa15.59■□□□□ 0.09
SPTBN1-203ENST00000389980 PARP4Q9UKK3 1724 aaKnown RBP15.59■□□□□ 0.09
SPTBN1-203ENST00000389980 IL2RBP14784 551 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms