RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 ANKRD62A6NC57 917 aa14.7□□□□□ -0.06
FANCA-202ENST00000389301 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.7□□□□□ -0.062e-7■■■■■ 30.6
FANCA-202ENST00000389301 ZSCAN12O43309 604 aa14.69□□□□□ -0.06
FANCA-202ENST00000389301 RPAP2Q8IXW5 612 aaPredicted RBP14.69□□□□□ -0.06
FANCA-202ENST00000389301 C16orf45Q96MC5 204 aaPredicted RBP14.69□□□□□ -0.06
FANCA-202ENST00000389301 CASQ1P31415 396 aa14.69□□□□□ -0.06
FANCA-202ENST00000389301 IKQ13123 557 aaPredicted RBP14.69□□□□□ -0.06
FANCA-202ENST00000389301 SULT6B1Q6IMI4 303 aa14.69□□□□□ -0.06
FANCA-202ENST00000389301 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
FANCA-202ENST00000389301 SLC3A2P08195 630 aaKnown RBP14.69□□□□□ -0.06
FANCA-202ENST00000389301 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
FANCA-202ENST00000389301 SRGAP3O43295 1099 aa14.69□□□□□ -0.06
FANCA-202ENST00000389301 NUP133Q8WUM0 1156 aa14.69□□□□□ -0.06
FANCA-202ENST00000389301 KIAA1107Q9UPP5 1409 aa14.68□□□□□ -0.06
FANCA-202ENST00000389301 SPDYE4A6NLX3 237 aa14.68□□□□□ -0.06
FANCA-202ENST00000389301 PDIA4P13667 645 aaKnown RBP14.68□□□□□ -0.06
FANCA-202ENST00000389301 NOL7Q9UMY1 257 aaKnown RBP14.68□□□□□ -0.06
FANCA-202ENST00000389301 CDKL5O76039 1030 aa14.68□□□□□ -0.06
FANCA-202ENST00000389301 NUTM1Q86Y26 1132 aa14.68□□□□□ -0.06
FANCA-202ENST00000389301 GTF2F1P35269 517 aaKnown RBP eCLIP14.67□□□□□ -0.068e-7■□□□□ 10.3
FANCA-202ENST00000389301 KRT32Q14532 448 aa14.67□□□□□ -0.06
FANCA-202ENST00000389301 ZHX3Q9H4I2 956 aa14.67□□□□□ -0.06
FANCA-202ENST00000389301 IBSPP21815 317 aaPredicted RBP14.67□□□□□ -0.06
FANCA-202ENST00000389301 TRMT1Q9NXH9 659 aaKnown RBP14.67□□□□□ -0.06
FANCA-202ENST00000389301 CFTRP13569 1480 aa14.67□□□□□ -0.06
FANCA-202ENST00000389301 ANO10Q9NW15 660 aa14.67□□□□□ -0.06
FANCA-202ENST00000389301 ARAP1Q96P48 1450 aa14.67□□□□□ -0.06
FANCA-202ENST00000389301 FANCD2Q9BXW9 1451 aa14.67□□□□□ -0.06
FANCA-202ENST00000389301 EIF5P55010 431 aaKnown RBP14.67□□□□□ -0.06
FANCA-202ENST00000389301 INCENPQ9NQS7 918 aa14.66□□□□□ -0.06
FANCA-202ENST00000389301 CNNM1Q9NRU3 951 aa14.66□□□□□ -0.06
FANCA-202ENST00000389301 DYNC1I1O14576 645 aa14.66□□□□□ -0.06
FANCA-202ENST00000389301 SMARCA5O60264 1052 aaPredicted RBP14.66□□□□□ -0.06
FANCA-202ENST00000389301 MCM5P33992 734 aa14.66□□□□□ -0.06
FANCA-202ENST00000389301 FAM177BA6PVY3 158 aa14.66□□□□□ -0.06
FANCA-202ENST00000389301 PLEKHO1Q53GL0 409 aaPredicted RBP14.66□□□□□ -0.06
FANCA-202ENST00000389301 EXOC6BQ9Y2D4 811 aa14.66□□□□□ -0.06
FANCA-202ENST00000389301 FGD5Q6ZNL6 1462 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 KIF5CO60282 957 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 ADCY5O95622 1261 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 TAF4BQ92750 862 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 PRDM2Q13029 1718 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 JAKMIP3Q5VZ66 844 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 HFM1A2PYH4 1435 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 KIF4BQ2VIQ3 1234 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 CKAP2LQ8IYA6 745 aa14.65□□□□□ -0.06
FANCA-202ENST00000389301 SCAND2PQ9GZW5 306 aaPredicted RBP14.65□□□□□ -0.06
FANCA-202ENST00000389301 ANKRD18AQ8IVF6 992 aa14.64□□□□□ -0.07
FANCA-202ENST00000389301 PRAM1Q96QH2 718 aa14.64□□□□□ -0.07
FANCA-202ENST00000389301 MAP9Q49MG5 647 aa14.64□□□□□ -0.07
FANCA-202ENST00000389301 PRPF40BQ6NWY9 871 aaKnown RBP14.64□□□□□ -0.07
FANCA-202ENST00000389301 MX1P20591 662 aa14.64□□□□□ -0.07
FANCA-202ENST00000389301 FKBP4Q02790 459 aaKnown RBP eCLIP14.64□□□□□ -0.07
FANCA-202ENST00000389301 SEPT11Q9NVA2 429 aaKnown RBP14.64□□□□□ -0.07
FANCA-202ENST00000389301 RBM27Q9P2N5 1060 aaKnown RBP14.64□□□□□ -0.07
FANCA-202ENST00000389301 TOP1P11387 765 aaKnown RBP14.64□□□□□ -0.07
FANCA-202ENST00000389301 RARSP54136 660 aaKnown RBP14.64□□□□□ -0.07
FANCA-202ENST00000389301 KIF6Q6ZMV9 814 aa14.64□□□□□ -0.07
FANCA-202ENST00000389301 TMX1Q9H3N1 280 aa14.64□□□□□ -0.07
FANCA-202ENST00000389301 PLEKHH1Q9ULM0 1364 aa14.63□□□□□ -0.07
FANCA-202ENST00000389301 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
FANCA-202ENST00000389301 GDPD2Q9HCC8 539 aa14.63□□□□□ -0.07
FANCA-202ENST00000389301 CTNNA3Q9UI47 895 aa14.63□□□□□ -0.07
FANCA-202ENST00000389301 NKTRP30414 1462 aaKnown RBP14.62□□□□□ -0.07
FANCA-202ENST00000389301 BAG4O95429 457 aaKnown RBP14.62□□□□□ -0.07
FANCA-202ENST00000389301 TMPOP42166 694 aaKnown RBP14.62□□□□□ -0.07
FANCA-202ENST00000389301 ANKRD30BQ9BXX2 1392 aa14.62□□□□□ -0.07
FANCA-202ENST00000389301 GAPVD1Q14C86 1478 aa14.62□□□□□ -0.07
FANCA-202ENST00000389301 CLCN1P35523 988 aa14.62□□□□□ -0.07
FANCA-202ENST00000389301 ABTB2Q8N961 1025 aa14.62□□□□□ -0.07
FANCA-202ENST00000389301 CCDC57Q2TAC2 916 aa14.62□□□□□ -0.07
FANCA-202ENST00000389301 DYDC1Q8WWB3 177 aa14.61□□□□□ -0.07
FANCA-202ENST00000389301 PRIMPOLQ96LW4 560 aa14.61□□□□□ -0.07
FANCA-202ENST00000389301 CABP1Q9NZU7 370 aa14.61□□□□□ -0.07
FANCA-202ENST00000389301 NEMFO60524 1076 aa14.61□□□□□ -0.07
FANCA-202ENST00000389301 ZSCAN25Q6NSZ9 544 aa14.61□□□□□ -0.07
FANCA-202ENST00000389301 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
FANCA-202ENST00000389301 MCM3P25205 808 aa14.61□□□□□ -0.07
FANCA-202ENST00000389301 ZSCAN23Q3MJ62 389 aa14.61□□□□□ -0.07
FANCA-202ENST00000389301 GPATCH11Q8N954 259 aa14.61□□□□□ -0.07
FANCA-202ENST00000389301 ZNF397Q8NF99 534 aaPredicted RBP14.61□□□□□ -0.07
FANCA-202ENST00000389301 SSH1Q8WYL5 1049 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 SH2B1Q9NRF2 756 aaPredicted RBP14.6□□□□□ -0.07
FANCA-202ENST00000389301 RAD54L2Q9Y4B4 1467 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 SSBP05455 408 aaKnown RBP eCLIP14.6□□□□□ -0.07
FANCA-202ENST00000389301 SPA17Q15506 151 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 SOGA3Q5TF21 947 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 WASF1Q92558 559 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 CDK19Q9BWU1 502 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 RAI14Q9P0K7 980 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 MYL6BP14649 208 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 TMEM132AQ24JP5 1023 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 KLHL40Q2TBA0 621 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 RNF187Q5TA31 235 aaPredicted RBP14.6□□□□□ -0.07
FANCA-202ENST00000389301 MAP2K1Q02750 393 aaPredicted RBP14.6□□□□□ -0.07
FANCA-202ENST00000389301 KLHL10Q6JEL2 608 aa14.6□□□□□ -0.07
FANCA-202ENST00000389301 PLEKHH2Q8IVE3 1493 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 FCHSD2O94868 740 aa14.59□□□□□ -0.07
FANCA-202ENST00000389301 IMMTQ16891 758 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms