RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 CHD1LQ86WJ1 897 aa18.23■□□□□ 0.51
ALK-201ENST00000389048 CCDC83Q8IWF9 413 aa18.23■□□□□ 0.51
ALK-201ENST00000389048 CPLX3Q8WVH0 158 aa18.23■□□□□ 0.51
ALK-201ENST00000389048 UBA5Q9GZZ9 404 aa18.23■□□□□ 0.51
ALK-201ENST00000389048 LUC7LQ9NQ29 371 aaKnown RBP18.23■□□□□ 0.51
ALK-201ENST00000389048 CCDC82Q8N4S0 544 aa18.23■□□□□ 0.51
ALK-201ENST00000389048 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
ALK-201ENST00000389048 TAF4BQ92750 862 aa18.23■□□□□ 0.51
ALK-201ENST00000389048 BLOC1S2Q6QNY1 142 aa18.22■□□□□ 0.51
ALK-201ENST00000389048 TMCO3Q6UWJ1 677 aa18.22■□□□□ 0.51
ALK-201ENST00000389048 GIMAP7Q8NHV1 300 aa18.22■□□□□ 0.51
ALK-201ENST00000389048 NACAP1Q9BZK3 213 aa18.22■□□□□ 0.51
ALK-201ENST00000389048 NOL7Q9UMY1 257 aaKnown RBP18.22■□□□□ 0.51
ALK-201ENST00000389048 ARHGAP29Q52LW3 1261 aa18.22■□□□□ 0.51
ALK-201ENST00000389048 MPHOSPH8Q99549 860 aa18.22■□□□□ 0.51
ALK-201ENST00000389048 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
ALK-201ENST00000389048 CASQ1P31415 396 aa18.22■□□□□ 0.51
ALK-201ENST00000389048 PLEKHO1Q53GL0 409 aaPredicted RBP18.22■□□□□ 0.51
ALK-201ENST00000389048 PPFIA3O75145 1194 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.21■□□□□ 0.51
ALK-201ENST00000389048 MIA2Q96PC5 1412 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 IDH1O75874 414 aaKnown RBP18.21■□□□□ 0.51
ALK-201ENST00000389048 XPCQ01831 940 aaPredicted RBP18.21■□□□□ 0.51
ALK-201ENST00000389048 CFAP70Q5T0N1 1121 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 RNF187Q5TA31 235 aaPredicted RBP18.21■□□□□ 0.51
ALK-201ENST00000389048 GAS2L2Q8NHY3 880 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 UBAC1Q9BSL1 405 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 SRGAP3O43295 1099 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 LIG1P18858 919 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 NF2P35240 595 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 CCDC57Q2TAC2 916 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 TXNDC2Q86VQ3 553 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 CTNNBL1Q8WYA6 563 aaPredicted RBP18.21■□□□□ 0.51
ALK-201ENST00000389048 ANKRD1Q15327 319 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
ALK-201ENST00000389048 RRS1Q15050 365 aaKnown RBP18.2■□□□□ 0.5
ALK-201ENST00000389048 SLC4A8Q2Y0W8 1093 aa18.2■□□□□ 0.5
ALK-201ENST00000389048 RRP9O43818 475 aaKnown RBP18.2■□□□□ 0.5
ALK-201ENST00000389048 CCDC148Q8NFR7 591 aa18.2■□□□□ 0.5
ALK-201ENST00000389048 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
ALK-201ENST00000389048 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
ALK-201ENST00000389048 JAKMIP3Q5VZ66 844 aa18.19■□□□□ 0.5
ALK-201ENST00000389048 IPO4Q8TEX9 1081 aaKnown RBP18.19■□□□□ 0.5
ALK-201ENST00000389048 MACROD2A1Z1Q3 448 aa18.19■□□□□ 0.5
ALK-201ENST00000389048 SPDYE4A6NLX3 237 aa18.19■□□□□ 0.5
ALK-201ENST00000389048 UBXN4Q92575 508 aa18.19■□□□□ 0.5
ALK-201ENST00000389048 PUS7Q96PZ0 661 aaKnown RBP18.19■□□□□ 0.5
ALK-201ENST00000389048 MYCNP04198 464 aaPredicted RBP18.19■□□□□ 0.5
ALK-201ENST00000389048 URI1O94763 535 aaPredicted RBP18.18■□□□□ 0.5
ALK-201ENST00000389048 ISM2Q6H9L7 571 aa18.18■□□□□ 0.5
ALK-201ENST00000389048 CGNQ9P2M7 1197 aaKnown RBP18.18■□□□□ 0.5
ALK-201ENST00000389048 LRP2BPQ9P2M1 347 aa18.18■□□□□ 0.5
ALK-201ENST00000389048 ESPNB1AK53 854 aa18.18■□□□□ 0.5
ALK-201ENST00000389048 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
ALK-201ENST00000389048 BACH2Q9BYV9 841 aa18.18■□□□□ 0.5
ALK-201ENST00000389048 IQCEQ6IPM2 695 aa18.17■□□□□ 0.5
ALK-201ENST00000389048 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.17■□□□□ 0.5
ALK-201ENST00000389048 ABCF2Q9UG63 623 aa18.17■□□□□ 0.5
ALK-201ENST00000389048 CRACR2AQ9BSW2 395 aa18.17■□□□□ 0.5
ALK-201ENST00000389048 SRCIN1Q9C0H9 1055 aa18.17■□□□□ 0.5
ALK-201ENST00000389048 EXOC6BQ9Y2D4 811 aa18.17■□□□□ 0.5
ALK-201ENST00000389048 MCM4P33991 863 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 SLC12A5Q9H2X9 1139 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 INCENPQ9NQS7 918 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 MINDY4BA8MYZ0 360 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 MAP3K11Q16584 847 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 NBPF1Q3BBV0 1214 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 TATP17735 454 aaPredicted RBP18.16■□□□□ 0.5
ALK-201ENST00000389048 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
ALK-201ENST00000389048 ANAPC15P60006 121 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 CKAP2LQ8IYA6 745 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 NACADO15069 1562 aa18.16■□□□□ 0.5
ALK-201ENST00000389048 PRPF40BQ6NWY9 871 aaKnown RBP18.15■□□□□ 0.5
ALK-201ENST00000389048 WIZO95785 1651 aa18.15■□□□□ 0.5
ALK-201ENST00000389048 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
ALK-201ENST00000389048 ZNF530Q6P9A1 599 aaPredicted RBP18.15■□□□□ 0.5
ALK-201ENST00000389048 IFFO1Q0D2I5 559 aa18.14■□□□□ 0.5
ALK-201ENST00000389048 PTPN14Q15678 1187 aa18.14■□□□□ 0.5
ALK-201ENST00000389048 SCLT1Q96NL6 688 aa18.14■□□□□ 0.5
ALK-201ENST00000389048 SHTN1A0MZ66 631 aa18.14■□□□□ 0.49
ALK-201ENST00000389048 CCT4P50991 539 aaKnown RBP18.14■□□□□ 0.49
ALK-201ENST00000389048 MVPQ14764 893 aaKnown RBP18.14■□□□□ 0.49
ALK-201ENST00000389048 ZNF397Q8NF99 534 aaPredicted RBP18.14■□□□□ 0.49
ALK-201ENST00000389048 SMTNL1A8MU46 457 aa18.14■□□□□ 0.49
ALK-201ENST00000389048 BRD4O60885 1362 aaPredicted RBP18.14■□□□□ 0.49
ALK-201ENST00000389048 CCDC144CPQ8IYA2 1237 aa18.14■□□□□ 0.49
ALK-201ENST00000389048 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
ALK-201ENST00000389048 GDPD2Q9HCC8 539 aa18.14■□□□□ 0.49
ALK-201ENST00000389048 SPA17Q15506 151 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 C16orf45Q96MC5 204 aaPredicted RBP18.13■□□□□ 0.49
ALK-201ENST00000389048 GSTTP1A0A1W2PQM5 241 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 ATP2C2O75185 946 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 RAB11FIP4Q86YS3 637 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 GTF2F1P35269 517 aaKnown RBP eCLIP18.13■□□□□ 0.49
ALK-201ENST00000389048 FAM69CQ0P6D2 419 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 KIF4BQ2VIQ3 1234 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 SPTY2D1Q68D10 685 aaPredicted RBP18.13■□□□□ 0.49
ALK-201ENST00000389048 CABP1Q9NZU7 370 aa18.13■□□□□ 0.49
ALK-201ENST00000389048 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms