RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
SGCB-201ENST00000381431 CCDC192P0DO97 292 aa20.42■□□□□ 0.86
SGCB-201ENST00000381431 KIF1BPQ96EK5 621 aa20.42■□□□□ 0.86
SGCB-201ENST00000381431 LRRFIP2Q9Y608 721 aaKnown RBP20.42■□□□□ 0.86
SGCB-201ENST00000381431 SMC2O95347 1197 aa20.42■□□□□ 0.86
SGCB-201ENST00000381431 MNS1Q8NEH6 495 aa20.42■□□□□ 0.86
SGCB-201ENST00000381431 TNMDQ9H2S6 317 aa20.42■□□□□ 0.86
SGCB-201ENST00000381431 CCDC158Q5M9N0 1113 aa20.41■□□□□ 0.86
SGCB-201ENST00000381431 PARD3Q8TEW0 1356 aa20.41■□□□□ 0.86
SGCB-201ENST00000381431 PRKCSHP14314 528 aaPredicted RBP20.41■□□□□ 0.86
SGCB-201ENST00000381431 TPM2P07951 284 aa20.41■□□□□ 0.86
SGCB-201ENST00000381431 DDX11Q96FC9 970 aa20.41■□□□□ 0.86
SGCB-201ENST00000381431 PER1O15534 1290 aaPredicted RBP20.4■□□□□ 0.86
SGCB-201ENST00000381431 CEBPAP49715 358 aaPredicted RBP20.4■□□□□ 0.86
SGCB-201ENST00000381431 AEBP1Q8IUX7 1158 aa20.4■□□□□ 0.86
SGCB-201ENST00000381431 BOLA2Q9H3K6 86 aa20.4■□□□□ 0.86
SGCB-201ENST00000381431 RLBP1P12271 317 aa20.4■□□□□ 0.86
SGCB-201ENST00000381431 ANKRD1Q15327 319 aa20.4■□□□□ 0.86
SGCB-201ENST00000381431 OLFM4Q6UX06 510 aa20.4■□□□□ 0.86
SGCB-201ENST00000381431 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
SGCB-201ENST00000381431 CCDC83Q8IWF9 413 aa20.4■□□□□ 0.86
SGCB-201ENST00000381431 BMP2KLQ5H9B9 411 aa20.39■□□□□ 0.85
SGCB-201ENST00000381431 TTC39AQ5SRH9 613 aa20.39■□□□□ 0.85
SGCB-201ENST00000381431 PRDM11Q9NQV5 511 aa20.39■□□□□ 0.85
SGCB-201ENST00000381431 ATP10BO94823 1461 aa20.39■□□□□ 0.85
SGCB-201ENST00000381431 PRPF40BQ6NWY9 871 aaKnown RBP20.39■□□□□ 0.85
SGCB-201ENST00000381431 NUP153P49790 1475 aaKnown RBP20.39■□□□□ 0.85
SGCB-201ENST00000381431 FOXO3O43524 673 aa20.39■□□□□ 0.85
SGCB-201ENST00000381431 MPRIPQ6WCQ1 1025 aa20.39■□□□□ 0.85
SGCB-201ENST00000381431 CCDC47Q96A33 483 aaKnown RBP20.39■□□□□ 0.85
SGCB-201ENST00000381431 PLEKHH1Q9ULM0 1364 aa20.38■□□□□ 0.85
SGCB-201ENST00000381431 SPINK5Q9NQ38 1064 aaPredicted RBP20.38■□□□□ 0.85
SGCB-201ENST00000381431 CEP126Q9P2H0 1117 aa20.38■□□□□ 0.85
SGCB-201ENST00000381431 RALGAPBQ86X10 1494 aa20.38■□□□□ 0.85
SGCB-201ENST00000381431 PTCD1O75127 700 aaKnown RBP20.38■□□□□ 0.85
SGCB-201ENST00000381431 GLRX3O76003 335 aaKnown RBP20.38■□□□□ 0.85
SGCB-201ENST00000381431 FLIIQ13045 1269 aa20.38■□□□□ 0.85
SGCB-201ENST00000381431 SART3Q15020 963 aaKnown RBP20.38■□□□□ 0.85
SGCB-201ENST00000381431 KIF6Q6ZMV9 814 aa20.38■□□□□ 0.85
SGCB-201ENST00000381431 GDPD2Q9HCC8 539 aa20.38■□□□□ 0.85
SGCB-201ENST00000381431 CCDC57Q2TAC2 916 aa20.37■□□□□ 0.85
SGCB-201ENST00000381431 SPG7Q9UQ90 795 aa20.37■□□□□ 0.85
SGCB-201ENST00000381431 DHX29Q7Z478 1369 aaKnown RBP20.37■□□□□ 0.85
SGCB-201ENST00000381431 PRAG1Q86YV5 1406 aa20.37■□□□□ 0.85
SGCB-201ENST00000381431 SPATA32Q96LK8 384 aa20.37■□□□□ 0.85
SGCB-201ENST00000381431 ZNF396Q96N95 335 aaPredicted RBP20.37■□□□□ 0.85
SGCB-201ENST00000381431 CEP89Q96ST8 783 aa20.37■□□□□ 0.85
SGCB-201ENST00000381431 CARD14Q9BXL6 1004 aa20.37■□□□□ 0.85
SGCB-201ENST00000381431 AMOTL2Q9Y2J4 779 aa20.37■□□□□ 0.85
SGCB-201ENST00000381431 TTLL5Q6EMB2 1281 aa20.37■□□□□ 0.85
SGCB-201ENST00000381431 CCDC8Q9H0W5 538 aaPredicted RBP20.37■□□□□ 0.85
SGCB-201ENST00000381431 C8orf34Q49A92 452 aa20.36■□□□□ 0.85
SGCB-201ENST00000381431 ANXA1P04083 346 aa20.36■□□□□ 0.85
SGCB-201ENST00000381431 SAMD1Q6SPF0 538 aaPredicted RBP20.36■□□□□ 0.85
SGCB-201ENST00000381431 HSP90AB2PQ58FF8 381 aa20.35■□□□□ 0.85
SGCB-201ENST00000381431 GPS2Q13227 327 aa20.35■□□□□ 0.85
SGCB-201ENST00000381431 XBP1P17861 261 aa20.35■□□□□ 0.85
SGCB-201ENST00000381431 FILIP1Q7Z7B0 1213 aa20.34■□□□□ 0.85
SGCB-201ENST00000381431 ZSCAN31Q96LW9 406 aaPredicted RBP20.34■□□□□ 0.85
SGCB-201ENST00000381431 FANCAO15360 1455 aa20.34■□□□□ 0.85
SGCB-201ENST00000381431 BRPF1P55201 1214 aaPredicted RBP20.34■□□□□ 0.85
SGCB-201ENST00000381431 MEIS3Q99687 375 aa20.34■□□□□ 0.85
SGCB-201ENST00000381431 HMGN5P82970 282 aaKnown RBP20.33■□□□□ 0.85
SGCB-201ENST00000381431 NUP62CLQ9H1M0 184 aa20.33■□□□□ 0.85
SGCB-201ENST00000381431 CAMK4Q16566 473 aa20.33■□□□□ 0.84
SGCB-201ENST00000381431 DNAAF4Q8WXU2 420 aa20.33■□□□□ 0.84
SGCB-201ENST00000381431 FAM135AQ9P2D6 1515 aa20.33■□□□□ 0.84
SGCB-201ENST00000381431 ZSCAN30Q86W11 494 aa20.32■□□□□ 0.84
SGCB-201ENST00000381431 PPP6R1Q9UPN7 881 aa20.32■□□□□ 0.84
SGCB-201ENST00000381431 RAB11FIP3O75154 756 aa20.32■□□□□ 0.84
SGCB-201ENST00000381431 TRIM34Q9BYJ4 488 aa20.32■□□□□ 0.84
SGCB-201ENST00000381431 BRMS1Q9HCU9 246 aa20.32■□□□□ 0.84
SGCB-201ENST00000381431 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
SGCB-201ENST00000381431 HDAC1Q13547 482 aaPredicted RBP20.31■□□□□ 0.84
SGCB-201ENST00000381431 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
SGCB-201ENST00000381431 SEC24BO95487 1268 aa20.31■□□□□ 0.84
SGCB-201ENST00000381431 CCDC70Q6NSX1 233 aa20.31■□□□□ 0.84
SGCB-201ENST00000381431 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.84
SGCB-201ENST00000381431 NUCB1Q02818 461 aa20.3■□□□□ 0.84
SGCB-201ENST00000381431 KCNH5Q8NCM2 988 aa20.3■□□□□ 0.84
SGCB-201ENST00000381431 PHF8Q9UPP1 1060 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 NSD2O96028 1365 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 PI4KAP2A4QPH2 592 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 IDH1O75874 414 aaKnown RBP20.29■□□□□ 0.84
SGCB-201ENST00000381431 PI4KAP1Q8N8J0 262 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 NUP133Q8WUM0 1156 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 MPHOSPH8Q99549 860 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 MYD88Q99836 296 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 ACEP12821 1306 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 MAP7D2Q96T17 732 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 ARGLU1Q9NWB6 273 aaPredicted RBP20.29■□□□□ 0.84
SGCB-201ENST00000381431 IL16Q14005 1332 aa20.29■□□□□ 0.84
SGCB-201ENST00000381431 SERPINC1P01008 464 aa20.28■□□□□ 0.84
SGCB-201ENST00000381431 KRT32Q14532 448 aa20.28■□□□□ 0.84
SGCB-201ENST00000381431 TSPYL6Q8N831 410 aa20.28■□□□□ 0.84
SGCB-201ENST00000381431 JMYQ8N9B5 988 aa20.28■□□□□ 0.84
SGCB-201ENST00000381431 BAG4O95429 457 aaKnown RBP20.28■□□□□ 0.84
SGCB-201ENST00000381431 NAP1L1P55209 391 aaKnown RBP20.28■□□□□ 0.84
SGCB-201ENST00000381431 LARP1Q6PKG0 1096 aaKnown RBP20.28■□□□□ 0.84
SGCB-201ENST00000381431 C16orf71Q8IYS4 520 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms