RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 MTHFSP49914 203 aa10.52□□□□□ -0.73
FAM49A-201ENST00000381323 KCNQ4P56696 695 aa10.52□□□□□ -0.73
FAM49A-201ENST00000381323 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.51□□□□□ -0.73
FAM49A-201ENST00000381323 RTL1A6NKG5 1358 aa10.51□□□□□ -0.73
FAM49A-201ENST00000381323 SLC16A10Q8TF71 515 aa10.51□□□□□ -0.73
FAM49A-201ENST00000381323 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
FAM49A-201ENST00000381323 MSL1Q68DK7 614 aa10.5□□□□□ -0.73
FAM49A-201ENST00000381323 ALS2Q96Q42 1657 aa10.5□□□□□ -0.73
FAM49A-201ENST00000381323 AMOTQ4VCS5 1084 aa10.5□□□□□ -0.73
FAM49A-201ENST00000381323 TTC5Q8N0Z6 440 aa10.5□□□□□ -0.73
FAM49A-201ENST00000381323 TNS2Q63HR2 1409 aa10.5□□□□□ -0.73
FAM49A-201ENST00000381323 SULT6B1Q6IMI4 303 aa10.49□□□□□ -0.73
FAM49A-201ENST00000381323 TRPM3Q9HCF6 1732 aaPredicted RBP10.49□□□□□ -0.73
FAM49A-201ENST00000381323 PTF1AQ7RTS3 328 aa10.49□□□□□ -0.73
FAM49A-201ENST00000381323 ANO8Q9HCE9 1232 aaPredicted RBP10.49□□□□□ -0.73
FAM49A-201ENST00000381323 NRKQ7Z2Y5 1582 aa10.49□□□□□ -0.73
FAM49A-201ENST00000381323 INSRP06213 1382 aa10.49□□□□□ -0.73
FAM49A-201ENST00000381323 TEFQ10587 303 aa10.49□□□□□ -0.73
FAM49A-201ENST00000381323 RTF1Q92541 710 aaKnown RBP10.49□□□□□ -0.73
FAM49A-201ENST00000381323 PTCD1O75127 700 aaKnown RBP10.48□□□□□ -0.73
FAM49A-201ENST00000381323 GNPATO15228 680 aa10.48□□□□□ -0.73
FAM49A-201ENST00000381323 DIAPH1O60610 1272 aaKnown RBP10.48□□□□□ -0.73
FAM49A-201ENST00000381323 WWC3Q9ULE0 1092 aa10.48□□□□□ -0.73
FAM49A-201ENST00000381323 EYA1Q99502 592 aa10.48□□□□□ -0.73
FAM49A-201ENST00000381323 RFC4P35249 363 aa10.47□□□□□ -0.73
FAM49A-201ENST00000381323 FHDC1Q9C0D6 1143 aaPredicted RBP10.47□□□□□ -0.73
FAM49A-201ENST00000381323 RTCBQ9Y3I0 505 aaKnown RBP10.47□□□□□ -0.73
FAM49A-201ENST00000381323 HMOX1P09601 288 aa10.47□□□□□ -0.73
FAM49A-201ENST00000381323 CARD14Q9BXL6 1004 aa10.46□□□□□ -0.73
FAM49A-201ENST00000381323 PHRF1Q9P1Y6 1649 aaKnown RBP10.46□□□□□ -0.73
FAM49A-201ENST00000381323 SLIT3O75094 1523 aa10.46□□□□□ -0.73
FAM49A-201ENST00000381323 POLKQ9UBT6 870 aa10.46□□□□□ -0.73
FAM49A-201ENST00000381323 WASHC2AQ641Q2 1341 aa10.46□□□□□ -0.73
FAM49A-201ENST00000381323 EIF4A2Q14240 407 aaKnown RBP10.45□□□□□ -0.74
FAM49A-201ENST00000381323 KIF24Q5T7B8 1368 aa10.45□□□□□ -0.74
FAM49A-201ENST00000381323 PALLDQ8WX93 1383 aa10.45□□□□□ -0.74
FAM49A-201ENST00000381323 TRAPPC3LQ5T215 181 aa10.45□□□□□ -0.74
FAM49A-201ENST00000381323 DISP2A7MBM2 1401 aa10.45□□□□□ -0.74
FAM49A-201ENST00000381323 U2AF1L5P0DN76 240 aaPredicted RBP10.44□□□□□ -0.74
FAM49A-201ENST00000381323 U2AF1Q01081 240 aaKnown RBP eCLIP10.44□□□□□ -0.74
FAM49A-201ENST00000381323 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
FAM49A-201ENST00000381323 GRIN3BO60391 1043 aa10.44□□□□□ -0.74
FAM49A-201ENST00000381323 ZPR1O75312 459 aa10.44□□□□□ -0.74
FAM49A-201ENST00000381323 LOC102724428A0A0B4J2F2 783 aa10.44□□□□□ -0.74
FAM49A-201ENST00000381323 SIK1P57059 783 aa10.44□□□□□ -0.74
FAM49A-201ENST00000381323 SYT17Q9BSW7 474 aa10.44□□□□□ -0.74
FAM49A-201ENST00000381323 NSD2O96028 1365 aa10.44□□□□□ -0.74
FAM49A-201ENST00000381323 RGPD1P0DJD0 1748 aa10.44□□□□□ -0.74
FAM49A-201ENST00000381323 BRWD3Q6RI45 1802 aa10.43□□□□□ -0.74
FAM49A-201ENST00000381323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.43□□□□□ -0.74
FAM49A-201ENST00000381323 PARP3Q9Y6F1 533 aa10.43□□□□□ -0.74
FAM49A-201ENST00000381323 TOPAZ1Q8N9V7 1692 aa10.43□□□□□ -0.74
FAM49A-201ENST00000381323 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.43□□□□□ -0.74
FAM49A-201ENST00000381323 MAPK8IP3Q9UPT6 1336 aa10.42□□□□□ -0.74
FAM49A-201ENST00000381323 ABCA3Q99758 1704 aa10.42□□□□□ -0.74
FAM49A-201ENST00000381323 CYP27B1O15528 508 aa10.42□□□□□ -0.74
FAM49A-201ENST00000381323 CENPBP07199 599 aaPredicted RBP10.42□□□□□ -0.74
FAM49A-201ENST00000381323 PROM2Q8N271 834 aa10.42□□□□□ -0.74
FAM49A-201ENST00000381323 PHKG2P15735 406 aa10.41□□□□□ -0.74
FAM49A-201ENST00000381323 PIK3C2AO00443 1686 aa10.41□□□□□ -0.74
FAM49A-201ENST00000381323 GTF2E1P29083 439 aaPredicted RBP10.41□□□□□ -0.74
FAM49A-201ENST00000381323 ZNF827Q17R98 1081 aa10.41□□□□□ -0.74
FAM49A-201ENST00000381323 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
FAM49A-201ENST00000381323 PIGBQ92521 554 aa10.41□□□□□ -0.74
FAM49A-201ENST00000381323 NRAPQ86VF7 1730 aa10.41□□□□□ -0.74
FAM49A-201ENST00000381323 PDGFDQ9GZP0 370 aaPredicted RBP10.41□□□□□ -0.74
FAM49A-201ENST00000381323 PNNQ9H307 717 aaKnown RBP10.41□□□□□ -0.74
FAM49A-201ENST00000381323 KIF7Q2M1P5 1343 aa10.4□□□□□ -0.74
FAM49A-201ENST00000381323 CCDC87Q9NVE4 849 aa10.4□□□□□ -0.74
FAM49A-201ENST00000381323 ERVV-2B6SEH9 535 aa10.4□□□□□ -0.74
FAM49A-201ENST00000381323 ASAP1Q9ULH1 1129 aa10.4□□□□□ -0.74
FAM49A-201ENST00000381323 NLGN1Q8N2Q7 840 aa10.4□□□□□ -0.75
FAM49A-201ENST00000381323 LRRC4BQ9NT99 713 aa10.4□□□□□ -0.75
FAM49A-201ENST00000381323 STARD3NLO95772 234 aa10.39□□□□□ -0.75
FAM49A-201ENST00000381323 NFATC2IPQ8NCF5 419 aa10.39□□□□□ -0.75
FAM49A-201ENST00000381323 ZNF526Q8TF50 670 aaPredicted RBP10.39□□□□□ -0.75
FAM49A-201ENST00000381323 BCS1LQ9Y276 419 aa10.39□□□□□ -0.75
FAM49A-201ENST00000381323 CD163L1Q9NR16 1453 aa10.38□□□□□ -0.75
FAM49A-201ENST00000381323 NFAT5O94916 1531 aa10.38□□□□□ -0.75
FAM49A-201ENST00000381323 COL23A1Q86Y22 540 aaPredicted RBP10.38□□□□□ -0.75
FAM49A-201ENST00000381323 AEBP1Q8IUX7 1158 aa10.38□□□□□ -0.75
FAM49A-201ENST00000381323 THSD7AQ9UPZ6 1657 aa10.38□□□□□ -0.75
FAM49A-201ENST00000381323 C16orf71Q8IYS4 520 aaPredicted RBP10.38□□□□□ -0.75
FAM49A-201ENST00000381323 CANXP27824 592 aaKnown RBP10.37□□□□□ -0.75
FAM49A-201ENST00000381323 BICDL1Q6ZP65 573 aa10.37□□□□□ -0.75
FAM49A-201ENST00000381323 SSFA2P28290 1259 aa10.37□□□□□ -0.75
FAM49A-201ENST00000381323 AKAP4Q5JQC9 854 aa10.37□□□□□ -0.75
FAM49A-201ENST00000381323 WDR43Q15061 677 aaKnown RBP eCLIP10.37□□□□□ -0.75
FAM49A-201ENST00000381323 TMX4Q9H1E5 349 aaPredicted RBP10.37□□□□□ -0.75
FAM49A-201ENST00000381323 ABCC6O95255 1503 aa10.37□□□□□ -0.75
FAM49A-201ENST00000381323 MEGF6O75095 1541 aa10.37□□□□□ -0.75
FAM49A-201ENST00000381323 MMP10P09238 476 aa10.36□□□□□ -0.75
FAM49A-201ENST00000381323 FCHSD2O94868 740 aa10.36□□□□□ -0.75
FAM49A-201ENST00000381323 PNPLA7Q6ZV29 1317 aa10.36□□□□□ -0.75
FAM49A-201ENST00000381323 ARHGAP27Q6ZUM4 889 aa10.36□□□□□ -0.75
FAM49A-201ENST00000381323 LMO7Q8WWI1 1683 aa10.36□□□□□ -0.75
FAM49A-201ENST00000381323 BCL9O00512 1426 aa10.35□□□□□ -0.75
FAM49A-201ENST00000381323 GIGYF1O75420 1035 aaPredicted RBP10.35□□□□□ -0.75
FAM49A-201ENST00000381323 GPBP1L1Q9HC44 474 aaPredicted RBP10.35□□□□□ -0.75
FAM49A-201ENST00000381323 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms