RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 LRP6O75581 1613 aa26.74■■□□□ 1.87
TSSC4-203ENST00000380996 CALD1Q05682 793 aaKnown RBP26.74■■□□□ 1.87
TSSC4-203ENST00000380996 PLCH1Q4KWH8 1693 aa26.73■■□□□ 1.87
TSSC4-203ENST00000380996 UNC5CLQ8IV45 518 aa26.73■■□□□ 1.87
TSSC4-203ENST00000380996 FNBP4Q8N3X1 1017 aaPredicted RBP26.73■■□□□ 1.87
TSSC4-203ENST00000380996 RTF1Q92541 710 aaKnown RBP26.73■■□□□ 1.87
TSSC4-203ENST00000380996 E9PSI1 815 aa26.72■■□□□ 1.87
TSSC4-203ENST00000380996 HTATSF1O43719 755 aaKnown RBP26.72■■□□□ 1.87
TSSC4-203ENST00000380996 SPG7Q9UQ90 795 aa26.72■■□□□ 1.87
TSSC4-203ENST00000380996 IL2RBP14784 551 aa26.71■■□□□ 1.87
TSSC4-203ENST00000380996 NWD2Q9ULI1 1742 aa26.71■■□□□ 1.87
TSSC4-203ENST00000380996 GNAT3A8MTJ3 354 aa26.7■■□□□ 1.87
TSSC4-203ENST00000380996 CDCA7LQ96GN5 454 aa26.7■■□□□ 1.87
TSSC4-203ENST00000380996 USP35Q9P2H5 1018 aa26.7■■□□□ 1.87
TSSC4-203ENST00000380996 IL16Q14005 1332 aa26.7■■□□□ 1.87
TSSC4-203ENST00000380996 ZNF530Q6P9A1 599 aaPredicted RBP26.7■■□□□ 1.86
TSSC4-203ENST00000380996 MEGF6O75095 1541 aa26.69■■□□□ 1.86
TSSC4-203ENST00000380996 SLFN5Q08AF3 891 aa26.69■■□□□ 1.86
TSSC4-203ENST00000380996 C1orf141Q5JVX7 400 aa26.69■■□□□ 1.86
TSSC4-203ENST00000380996 MAP3K5Q99683 1374 aa26.68■■□□□ 1.86
TSSC4-203ENST00000380996 AKAP4Q5JQC9 854 aa26.68■■□□□ 1.86
TSSC4-203ENST00000380996 THRAP3Q9Y2W1 955 aaKnown RBP26.68■■□□□ 1.86
TSSC4-203ENST00000380996 OVOS2A0A0G2JMS6 1433 aa26.67■■□□□ 1.86
TSSC4-203ENST00000380996 USP21Q9UK80 565 aa26.66■■□□□ 1.86
TSSC4-203ENST00000380996 NRAPQ86VF7 1730 aa26.66■■□□□ 1.86
TSSC4-203ENST00000380996 MYH16Q9H6N6 1097 aa26.65■■□□□ 1.86
TSSC4-203ENST00000380996 CCDC9Q9Y3X0 531 aaKnown RBP26.65■■□□□ 1.86
TSSC4-203ENST00000380996 SPATA31A1Q5TZJ5 1347 aa26.65■■□□□ 1.86
TSSC4-203ENST00000380996 BCL9LQ86UU0 1499 aa26.65■■□□□ 1.86
TSSC4-203ENST00000380996 SPATA31A5Q5VU36 1347 aa26.65■■□□□ 1.86
TSSC4-203ENST00000380996 SPATA31A7Q8IWB4 1347 aa26.65■■□□□ 1.86
TSSC4-203ENST00000380996 VPS72Q15906 364 aa26.65■■□□□ 1.86
TSSC4-203ENST00000380996 CDCA7Q9BWT1 371 aaPredicted RBP26.65■■□□□ 1.86
TSSC4-203ENST00000380996 MCM10Q7L590 875 aa26.64■■□□□ 1.85
TSSC4-203ENST00000380996 TRMT2AQ8IZ69 625 aaKnown RBP26.64■■□□□ 1.85
TSSC4-203ENST00000380996 ZCRB1Q8TBF4 217 aaKnown RBP26.64■■□□□ 1.85
TSSC4-203ENST00000380996 DCTN1Q14203 1278 aa26.63■■□□□ 1.85
TSSC4-203ENST00000380996 SPINK5Q9NQ38 1064 aaPredicted RBP26.63■■□□□ 1.85
TSSC4-203ENST00000380996 DUSP27Q5VZP5 1158 aa26.62■■□□□ 1.85
TSSC4-203ENST00000380996 IFNL2Q8IZJ0 200 aa26.62■■□□□ 1.85
TSSC4-203ENST00000380996 THUMPD2Q9BTF0 503 aaKnown RBP26.62■■□□□ 1.85
TSSC4-203ENST00000380996 AFF2P51816 1311 aa26.61■■□□□ 1.85
TSSC4-203ENST00000380996 GNAI1P63096 354 aa26.6■■□□□ 1.85
TSSC4-203ENST00000380996 IFT57Q9NWB7 429 aa26.6■■□□□ 1.85
TSSC4-203ENST00000380996 PARP4Q9UKK3 1724 aaKnown RBP26.6■■□□□ 1.85
TSSC4-203ENST00000380996 DLG5Q8TDM6 1919 aa26.6■■□□□ 1.85
TSSC4-203ENST00000380996 PCDH11XQ9BZA7 1347 aa26.6■■□□□ 1.85
TSSC4-203ENST00000380996 PCDH11YQ9BZA8 1340 aa26.6■■□□□ 1.85
TSSC4-203ENST00000380996 HSP90AB1P08238 724 aaKnown RBP26.6■■□□□ 1.85
TSSC4-203ENST00000380996 PHKG2P15735 406 aa26.59■■□□□ 1.85
TSSC4-203ENST00000380996 BARGINQ6ZT62 677 aa26.59■■□□□ 1.85
TSSC4-203ENST00000380996 DISP2A7MBM2 1401 aa26.59■■□□□ 1.85
TSSC4-203ENST00000380996 IL17REQ8NFR9 667 aa26.58■■□□□ 1.85
TSSC4-203ENST00000380996 CFAP44Q96MT7 982 aa26.58■■□□□ 1.85
TSSC4-203ENST00000380996 LAS1LQ9Y4W2 734 aaKnown RBP26.57■■□□□ 1.84
TSSC4-203ENST00000380996 CYP27B1O15528 508 aa26.56■■□□□ 1.84
TSSC4-203ENST00000380996 PKD1L3Q7Z443 1732 aa26.56■■□□□ 1.84
TSSC4-203ENST00000380996 ZNF853P0CG23 659 aa26.55■■□□□ 1.84
TSSC4-203ENST00000380996 MPRIPQ6WCQ1 1025 aa26.55■■□□□ 1.84
TSSC4-203ENST00000380996 CEMIPQ8WUJ3 1361 aa26.55■■□□□ 1.84
TSSC4-203ENST00000380996 EXOC5O00471 708 aa26.55■■□□□ 1.84
TSSC4-203ENST00000380996 RNMTO43148 476 aaKnown RBP26.55■■□□□ 1.84
TSSC4-203ENST00000380996 TRPC5Q9UL62 973 aaPredicted RBP26.55■■□□□ 1.84
TSSC4-203ENST00000380996 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.54■■□□□ 1.84
TSSC4-203ENST00000380996 DCAF5Q96JK2 942 aa26.54■■□□□ 1.84
TSSC4-203ENST00000380996 LGR6Q9HBX8 967 aa26.54■■□□□ 1.84
TSSC4-203ENST00000380996 FANCIQ9NVI1 1328 aa26.53■■□□□ 1.84
TSSC4-203ENST00000380996 TEFQ10587 303 aa26.52■■□□□ 1.84
TSSC4-203ENST00000380996 TAF7Q15545 349 aaPredicted RBP26.52■■□□□ 1.84
TSSC4-203ENST00000380996 DDX54Q8TDD1 881 aaKnown RBP26.52■■□□□ 1.84
TSSC4-203ENST00000380996 TSR2Q969E8 191 aaKnown RBP26.52■■□□□ 1.84
TSSC4-203ENST00000380996 BABAM1Q9NWV8 329 aa26.52■■□□□ 1.84
TSSC4-203ENST00000380996 CHL1O00533 1208 aa26.51■■□□□ 1.83
TSSC4-203ENST00000380996 NKX1-1Q15270 411 aaPredicted RBP26.49■■□□□ 1.83
TSSC4-203ENST00000380996 DDB1Q16531 1140 aa26.49■■□□□ 1.83
TSSC4-203ENST00000380996 GJD4Q96KN9 370 aaPredicted RBP26.49■■□□□ 1.83
TSSC4-203ENST00000380996 MBIPQ9NS73 344 aa26.49■■□□□ 1.83
TSSC4-203ENST00000380996 ATRNO75882 1429 aa26.49■■□□□ 1.83
TSSC4-203ENST00000380996 FAM98CQ17RN3 349 aaKnown RBP26.49■■□□□ 1.83
TSSC4-203ENST00000380996 ILDR2Q71H61 639 aa26.49■■□□□ 1.83
TSSC4-203ENST00000380996 TSPYL4Q9UJ04 414 aa26.48■■□□□ 1.83
TSSC4-203ENST00000380996 TNS2Q63HR2 1409 aa26.47■■□□□ 1.83
TSSC4-203ENST00000380996 CT47B1P0C2W7 299 aaPredicted RBP26.47■■□□□ 1.83
TSSC4-203ENST00000380996 QTRT2Q9H974 415 aaKnown RBP26.47■■□□□ 1.83
TSSC4-203ENST00000380996 LRRC37A3O60309 1634 aa26.46■■□□□ 1.83
TSSC4-203ENST00000380996 ZNF772Q68DY9 489 aaPredicted RBP26.46■■□□□ 1.83
TSSC4-203ENST00000380996 RCAN3Q9UKA8 241 aa26.46■■□□□ 1.83
TSSC4-203ENST00000380996 KDM6AO15550 1401 aaPredicted RBP26.46■■□□□ 1.83
TSSC4-203ENST00000380996 EXOSC9Q06265 439 aaKnown RBP26.44■■□□□ 1.82
TSSC4-203ENST00000380996 WNK3Q9BYP7 1800 aa26.44■■□□□ 1.82
TSSC4-203ENST00000380996 SLC52A2Q9HAB3 445 aa26.44■■□□□ 1.82
TSSC4-203ENST00000380996 ADAMTS7Q9UKP4 1686 aa26.43■■□□□ 1.82
TSSC4-203ENST00000380996 ERVV-2B6SEH9 535 aa26.43■■□□□ 1.82
TSSC4-203ENST00000380996 A0A0G2JS52 829 aa26.42■■□□□ 1.82
TSSC4-203ENST00000380996 BTBD11A6QL63 1104 aa26.42■■□□□ 1.82
TSSC4-203ENST00000380996 MYT1Q01538 1121 aa26.42■■□□□ 1.82
TSSC4-203ENST00000380996 MIS18AQ9NYP9 233 aa26.42■■□□□ 1.82
TSSC4-203ENST00000380996 CABP4P57796 275 aa26.41■■□□□ 1.82
TSSC4-203ENST00000380996 RGS17Q9UGC6 210 aaPredicted RBP26.4■■□□□ 1.82
TSSC4-203ENST00000380996 ONECUT3O60422 494 aaPredicted RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms