RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
SNAPC3-202ENST00000380821 NUTM2GQ5VZR2 741 aa20.09■□□□□ 0.81
SNAPC3-202ENST00000380821 FILIP1Q7Z7B0 1213 aa20.09■□□□□ 0.81
SNAPC3-202ENST00000380821 CWC27Q6UX04 472 aaKnown RBP20.08■□□□□ 0.81
SNAPC3-202ENST00000380821 MCM3P25205 808 aa20.08■□□□□ 0.81
SNAPC3-202ENST00000380821 PRAM1Q96QH2 718 aa20.08■□□□□ 0.8
SNAPC3-202ENST00000380821 INCENPQ9NQS7 918 aa20.08■□□□□ 0.8
SNAPC3-202ENST00000380821 NKTRP30414 1462 aaKnown RBP20.08■□□□□ 0.8
SNAPC3-202ENST00000380821 ATF3P18847 181 aa20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 SULT6B1Q6IMI4 303 aa20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 ABTB2Q8N961 1025 aa20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 FCHSD2O94868 740 aa20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 CASTP20810 708 aaKnown RBP20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 ARHGAP29Q52LW3 1261 aa20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 KIAA1328Q86T90 577 aa20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 MCM5P33992 734 aa20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 CNKSR2Q8WXI2 1034 aa20.07■□□□□ 0.8
SNAPC3-202ENST00000380821 ANO10Q9NW15 660 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 CASQ1P31415 396 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 TMEM57Q8N5G2 664 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 SIL1Q9H173 461 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 CDK19Q9BWU1 502 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 SHTN1A0MZ66 631 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 MAP9Q49MG5 647 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 SOGA3Q5TF21 947 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 KIF18AQ8NI77 898 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 CENPHQ9H3R5 247 aa20.06■□□□□ 0.8
SNAPC3-202ENST00000380821 RAB11FIP3O75154 756 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 SFPQP23246 707 aaKnown RBP eCLIP20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 TAF4BQ92750 862 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 DAPK1P53355 1430 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 PDCL3Q9H2J4 239 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 SLC12A5Q9H2X9 1139 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 SRGAP3O43295 1099 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 CCDC184Q52MB2 194 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 NEMFO60524 1076 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 CFAP100Q494V2 611 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 JAKMIP3Q5VZ66 844 aa20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 ZNF397Q8NF99 534 aaPredicted RBP20.05■□□□□ 0.8
SNAPC3-202ENST00000380821 ALDH1L2Q3SY69 923 aa20.04■□□□□ 0.8
SNAPC3-202ENST00000380821 SCAND2PQ9GZW5 306 aaPredicted RBP20.04■□□□□ 0.8
SNAPC3-202ENST00000380821 SH2B1Q9NRF2 756 aaPredicted RBP20.04■□□□□ 0.8
SNAPC3-202ENST00000380821 ATAD2Q6PL18 1390 aa20.04■□□□□ 0.8
SNAPC3-202ENST00000380821 TATP17735 454 aaPredicted RBP20.04■□□□□ 0.8
SNAPC3-202ENST00000380821 NUP133Q8WUM0 1156 aa20.04■□□□□ 0.8
SNAPC3-202ENST00000380821 CRACR2AQ9BSW2 395 aa20.03■□□□□ 0.8
SNAPC3-202ENST00000380821 CAMK4Q16566 473 aa20.03■□□□□ 0.8
SNAPC3-202ENST00000380821 LRRFIP2Q9Y608 721 aaKnown RBP20.03■□□□□ 0.8
SNAPC3-202ENST00000380821 CTAGE5O15320 804 aa20.03■□□□□ 0.8
SNAPC3-202ENST00000380821 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
SNAPC3-202ENST00000380821 WWC2Q6AWC2 1192 aa20.02■□□□□ 0.8
SNAPC3-202ENST00000380821 BMP2KQ9NSY1 1161 aaPredicted RBP20.02■□□□□ 0.8
SNAPC3-202ENST00000380821 TMEM132AQ24JP5 1023 aa20.02■□□□□ 0.8
SNAPC3-202ENST00000380821 MX1P20591 662 aa20.02■□□□□ 0.8
SNAPC3-202ENST00000380821 GBP2P32456 591 aaPredicted RBP20.02■□□□□ 0.8
SNAPC3-202ENST00000380821 TAX1BP1Q86VP1 789 aa20.02■□□□□ 0.8
SNAPC3-202ENST00000380821 CALCOCO1Q9P1Z2 691 aa20.02■□□□□ 0.8
SNAPC3-202ENST00000380821 EIF5P55010 431 aaKnown RBP20.02■□□□□ 0.79
SNAPC3-202ENST00000380821 KIF5CO60282 957 aa20.01■□□□□ 0.79
SNAPC3-202ENST00000380821 CBX1P83916 185 aa20.01■□□□□ 0.79
SNAPC3-202ENST00000380821 STK11IPQ8N1F8 1099 aa20.01■□□□□ 0.79
SNAPC3-202ENST00000380821 ABCC11Q96J66 1382 aa20.01■□□□□ 0.79
SNAPC3-202ENST00000380821 IMMTQ16891 758 aaKnown RBP20.01■□□□□ 0.79
SNAPC3-202ENST00000380821 RPGRIP1LQ68CZ1 1315 aa20.01■□□□□ 0.79
SNAPC3-202ENST00000380821 CLIP2Q9UDT6 1046 aa20.01■□□□□ 0.79
SNAPC3-202ENST00000380821 DHX29Q7Z478 1369 aaKnown RBP20■□□□□ 0.79
SNAPC3-202ENST00000380821 POTEB2H3BUK9 544 aa20■□□□□ 0.79
SNAPC3-202ENST00000380821 EZRP15311 586 aaKnown RBP20■□□□□ 0.79
SNAPC3-202ENST00000380821 BBXQ8WY36 941 aaPredicted RBP20■□□□□ 0.79
SNAPC3-202ENST00000380821 TNPO1Q92973 898 aaKnown RBP20■□□□□ 0.79
SNAPC3-202ENST00000380821 UBAC1Q9BSL1 405 aa20■□□□□ 0.79
SNAPC3-202ENST00000380821 ANKRD62A6NC57 917 aa20■□□□□ 0.79
SNAPC3-202ENST00000380821 CABP1Q9NZU7 370 aa20■□□□□ 0.79
SNAPC3-202ENST00000380821 RTEL1-TNFRSF6BF6WH68 1400 aa20■□□□□ 0.79
SNAPC3-202ENST00000380821 NSD3Q9BZ95 1437 aa20■□□□□ 0.79
SNAPC3-202ENST00000380821 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
SNAPC3-202ENST00000380821 CCDC83Q8IWF9 413 aa20■□□□□ 0.79
SNAPC3-202ENST00000380821 GIMAP7Q8NHV1 300 aa20■□□□□ 0.79
SNAPC3-202ENST00000380821 SYNJ1O43426 1573 aa19.99■□□□□ 0.79
SNAPC3-202ENST00000380821 FAM107BQ9H098 131 aa19.99■□□□□ 0.79
SNAPC3-202ENST00000380821 KIF1BPQ96EK5 621 aa19.99■□□□□ 0.79
SNAPC3-202ENST00000380821 ZHX3Q9H4I2 956 aa19.99■□□□□ 0.79
SNAPC3-202ENST00000380821 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
SNAPC3-202ENST00000380821 SPG7Q9UQ90 795 aa19.98■□□□□ 0.79
SNAPC3-202ENST00000380821 SLC26A8Q96RN1 970 aa19.98■□□□□ 0.79
SNAPC3-202ENST00000380821 CABP4P57796 275 aa19.98■□□□□ 0.79
SNAPC3-202ENST00000380821 XPCQ01831 940 aaPredicted RBP19.98■□□□□ 0.79
SNAPC3-202ENST00000380821 SPA17Q15506 151 aa19.98■□□□□ 0.79
SNAPC3-202ENST00000380821 TBC1D2Q9BYX2 928 aa19.98■□□□□ 0.79
SNAPC3-202ENST00000380821 IL1RAPL2Q9NP60 686 aa19.98■□□□□ 0.79
SNAPC3-202ENST00000380821 GLRX3O76003 335 aaKnown RBP19.98■□□□□ 0.79
SNAPC3-202ENST00000380821 FKBP4Q02790 459 aaKnown RBP eCLIP19.98■□□□□ 0.797e-6■■■■□ 25.4
SNAPC3-202ENST00000380821 UVSSAQ2YD98 709 aa19.98■□□□□ 0.79
SNAPC3-202ENST00000380821 LRPPRCP42704 1394 aaKnown RBP19.97■□□□□ 0.79
SNAPC3-202ENST00000380821 GSDMDP57764 484 aa19.97■□□□□ 0.79
SNAPC3-202ENST00000380821 SSFA2P28290 1259 aa19.97■□□□□ 0.79
SNAPC3-202ENST00000380821 RARSP54136 660 aaKnown RBP19.97■□□□□ 0.79
SNAPC3-202ENST00000380821 ZNF530Q6P9A1 599 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms