RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 C20orf194Q5TEA3 1177 aa17.77■□□□□ 0.43
TNFSF13-203ENST00000380535 LMOD2Q6P5Q4 547 aa17.77■□□□□ 0.43
TNFSF13-203ENST00000380535 NCAPD2Q15021 1401 aa17.76■□□□□ 0.43
TNFSF13-203ENST00000380535 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
TNFSF13-203ENST00000380535 ALDH1L2Q3SY69 923 aa17.76■□□□□ 0.43
TNFSF13-203ENST00000380535 BRINP3Q76B58 766 aa17.76■□□□□ 0.43
TNFSF13-203ENST00000380535 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
TNFSF13-203ENST00000380535 NHSL1Q5SYE7 1610 aa17.75■□□□□ 0.43
TNFSF13-203ENST00000380535 EXOSC9Q06265 439 aaKnown RBP17.74■□□□□ 0.43
TNFSF13-203ENST00000380535 RTF1Q92541 710 aaKnown RBP17.74■□□□□ 0.43
TNFSF13-203ENST00000380535 SOS2Q07890 1332 aaPredicted RBP17.73■□□□□ 0.43
TNFSF13-203ENST00000380535 BCAR3O75815 825 aa17.73■□□□□ 0.43
TNFSF13-203ENST00000380535 TSR2Q969E8 191 aaKnown RBP17.73■□□□□ 0.43
TNFSF13-203ENST00000380535 CPDO75976 1380 aa17.73■□□□□ 0.43
TNFSF13-203ENST00000380535 TPRNQ4KMQ1 711 aa17.73■□□□□ 0.43
TNFSF13-203ENST00000380535 LRRC37A3O60309 1634 aa17.72■□□□□ 0.43
TNFSF13-203ENST00000380535 BRPF1P55201 1214 aaPredicted RBP17.72■□□□□ 0.43
TNFSF13-203ENST00000380535 BABAM1Q9NWV8 329 aa17.72■□□□□ 0.43
TNFSF13-203ENST00000380535 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
TNFSF13-203ENST00000380535 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
TNFSF13-203ENST00000380535 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
TNFSF13-203ENST00000380535 LMO7Q8WWI1 1683 aa17.7■□□□□ 0.42
TNFSF13-203ENST00000380535 KIAA0232Q92628 1395 aa17.7■□□□□ 0.42
TNFSF13-203ENST00000380535 COL18A1P39060 1754 aa17.7■□□□□ 0.42
TNFSF13-203ENST00000380535 AMOTQ4VCS5 1084 aa17.7■□□□□ 0.42
TNFSF13-203ENST00000380535 LTV1Q96GA3 475 aaPredicted RBP17.7■□□□□ 0.42
TNFSF13-203ENST00000380535 MAP3K5Q99683 1374 aa17.69■□□□□ 0.42
TNFSF13-203ENST00000380535 GNAT3A8MTJ3 354 aa17.69■□□□□ 0.42
TNFSF13-203ENST00000380535 ZKSCAN2Q63HK3 967 aa17.69■□□□□ 0.42
TNFSF13-203ENST00000380535 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
TNFSF13-203ENST00000380535 CHL1O00533 1208 aa17.69■□□□□ 0.42
TNFSF13-203ENST00000380535 MBIPQ9NS73 344 aa17.69■□□□□ 0.42
TNFSF13-203ENST00000380535 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
TNFSF13-203ENST00000380535 SOS1Q07889 1333 aaPredicted RBP17.68■□□□□ 0.42
TNFSF13-203ENST00000380535 CRB1P82279 1406 aa17.68■□□□□ 0.42
TNFSF13-203ENST00000380535 SMC4Q9NTJ3 1288 aa17.68■□□□□ 0.42
TNFSF13-203ENST00000380535 PLEKHO1Q53GL0 409 aaPredicted RBP17.67■□□□□ 0.42
TNFSF13-203ENST00000380535 RGPD2P0DJD1 1756 aa17.67■□□□□ 0.42
TNFSF13-203ENST00000380535 OVOS2A0A0G2JMS6 1433 aa17.67■□□□□ 0.42
TNFSF13-203ENST00000380535 ZBTB7CA1YPR0 619 aa17.67■□□□□ 0.42
TNFSF13-203ENST00000380535 NBPF6Q5VWK0 638 aa17.67■□□□□ 0.42
TNFSF13-203ENST00000380535 NBPF4Q96M43 638 aa17.67■□□□□ 0.42
TNFSF13-203ENST00000380535 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
TNFSF13-203ENST00000380535 ERBB3P21860 1342 aa17.66■□□□□ 0.42
TNFSF13-203ENST00000380535 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
TNFSF13-203ENST00000380535 FAM83GA6ND36 823 aa17.65■□□□□ 0.42
TNFSF13-203ENST00000380535 THUMPD2Q9BTF0 503 aaKnown RBP17.65■□□□□ 0.42
TNFSF13-203ENST00000380535 ABCA3Q99758 1704 aa17.65■□□□□ 0.42
TNFSF13-203ENST00000380535 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.42
TNFSF13-203ENST00000380535 ARHGAP45Q92619 1136 aa17.64■□□□□ 0.42
TNFSF13-203ENST00000380535 FRAT1Q92837 279 aaPredicted RBP17.64■□□□□ 0.42
TNFSF13-203ENST00000380535 VAMP4O75379 141 aa17.64■□□□□ 0.41
TNFSF13-203ENST00000380535 TWISTNBQ3B726 338 aaPredicted RBP17.64■□□□□ 0.41
TNFSF13-203ENST00000380535 SSH1Q8WYL5 1049 aa17.64■□□□□ 0.41
TNFSF13-203ENST00000380535 DDX17Q92841 729 aaKnown RBP17.64■□□□□ 0.41
TNFSF13-203ENST00000380535 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
TNFSF13-203ENST00000380535 AHDC1Q5TGY3 1603 aaPredicted RBP17.63■□□□□ 0.41
TNFSF13-203ENST00000380535 ZC3H6P61129 1189 aaKnown RBP17.63■□□□□ 0.41
TNFSF13-203ENST00000380535 MCM10Q7L590 875 aa17.63■□□□□ 0.41
TNFSF13-203ENST00000380535 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
TNFSF13-203ENST00000380535 FTSJ3Q8IY81 847 aaKnown RBP17.62■□□□□ 0.41
TNFSF13-203ENST00000380535 DZIP1LQ8IYY4 767 aaKnown RBP17.62■□□□□ 0.41
TNFSF13-203ENST00000380535 KDM2BQ8NHM5 1336 aa17.62■□□□□ 0.41
TNFSF13-203ENST00000380535 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
TNFSF13-203ENST00000380535 ATF7IPQ6VMQ6 1270 aa17.62■□□□□ 0.41
TNFSF13-203ENST00000380535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.41
TNFSF13-203ENST00000380535 CENPQQ7L2Z9 268 aaPredicted RBP17.6■□□□□ 0.41
TNFSF13-203ENST00000380535 CEMIPQ8WUJ3 1361 aa17.6■□□□□ 0.41
TNFSF13-203ENST00000380535 DHX37Q8IY37 1157 aaKnown RBP17.6■□□□□ 0.41
TNFSF13-203ENST00000380535 TSPYL4Q9UJ04 414 aa17.6■□□□□ 0.41
TNFSF13-203ENST00000380535 AXIN2Q9Y2T1 843 aa17.6■□□□□ 0.41
TNFSF13-203ENST00000380535 TAF7Q15545 349 aaPredicted RBP17.59■□□□□ 0.41
TNFSF13-203ENST00000380535 C1orf141Q5JVX7 400 aa17.59■□□□□ 0.41
TNFSF13-203ENST00000380535 USHBP1Q8N6Y0 703 aa17.59■□□□□ 0.41
TNFSF13-203ENST00000380535 LRRC59Q96AG4 307 aaKnown RBP17.59■□□□□ 0.41
TNFSF13-203ENST00000380535 ROBO1Q9Y6N7 1651 aa17.59■□□□□ 0.41
TNFSF13-203ENST00000380535 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
TNFSF13-203ENST00000380535 RAPGEF4Q8WZA2 1011 aa17.59■□□□□ 0.41
TNFSF13-203ENST00000380535 BCL2L13Q9BXK5 485 aa17.59■□□□□ 0.41
TNFSF13-203ENST00000380535 DDX19BQ9UMR2 479 aa17.59■□□□□ 0.41
TNFSF13-203ENST00000380535 COL22A1Q8NFW1 1626 aaPredicted RBP17.58■□□□□ 0.41
TNFSF13-203ENST00000380535 TCERG1O14776 1098 aaKnown RBP17.58■□□□□ 0.4
TNFSF13-203ENST00000380535 MRPL50Q8N5N7 158 aaKnown RBP17.58■□□□□ 0.4
TNFSF13-203ENST00000380535 CLUAP1Q96AJ1 413 aa17.58■□□□□ 0.4
TNFSF13-203ENST00000380535 ADAMTS7Q9UKP4 1686 aa17.58■□□□□ 0.4
TNFSF13-203ENST00000380535 CACNA1FO60840 1977 aa17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 ZNF530Q6P9A1 599 aaPredicted RBP17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 PANK1Q8TE04 598 aa17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 TATP17735 454 aaPredicted RBP17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 GLIPR1L2Q4G1C9 344 aa17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 C8orf58Q8NAV2 365 aa17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 NOB1Q9ULX3 412 aaKnown RBP17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 VIRMAQ69YN4 1812 aaKnown RBP17.57■□□□□ 0.4
TNFSF13-203ENST00000380535 CSB-PGBD3P0DP91 1061 aa17.56■□□□□ 0.4
TNFSF13-203ENST00000380535 TRIM27P14373 513 aa17.56■□□□□ 0.4
TNFSF13-203ENST00000380535 PRDM11Q9NQV5 511 aa17.56■□□□□ 0.4
TNFSF13-203ENST00000380535 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
TNFSF13-203ENST00000380535 COG6Q9Y2V7 657 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms