RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 SLC15A2Q16348 729 aa6.46□□□□□ -1.38
C9orf72-203ENST00000380003 AMIGO3Q86WK7 504 aa6.46□□□□□ -1.38
C9orf72-203ENST00000380003 ZCRB1Q8TBF4 217 aaKnown RBP6.46□□□□□ -1.38
C9orf72-203ENST00000380003 RGPD1P0DJD0 1748 aa6.46□□□□□ -1.38
C9orf72-203ENST00000380003 EIF4G2P78344 907 aaKnown RBP eCLIP6.46□□□□□ -1.38
C9orf72-203ENST00000380003 PELP1Q8IZL8 1130 aaKnown RBP6.46□□□□□ -1.38
C9orf72-203ENST00000380003 RAPGEF4Q8WZA2 1011 aa6.46□□□□□ -1.38
C9orf72-203ENST00000380003 SPON1Q9HCB6 807 aa6.46□□□□□ -1.38
C9orf72-203ENST00000380003 CYP27B1O15528 508 aa6.45□□□□□ -1.38
C9orf72-203ENST00000380003 BRD4O60885 1362 aaPredicted RBP6.45□□□□□ -1.38
C9orf72-203ENST00000380003 FHDC1Q9C0D6 1143 aaPredicted RBP6.45□□□□□ -1.38
C9orf72-203ENST00000380003 TFCP2L1Q9NZI6 479 aa6.45□□□□□ -1.38
C9orf72-203ENST00000380003 PARP4Q9UKK3 1724 aaKnown RBP6.45□□□□□ -1.38
C9orf72-203ENST00000380003 CCDC7Q96M83 1385 aa6.45□□□□□ -1.38
C9orf72-203ENST00000380003 PHF14O94880 888 aa6.45□□□□□ -1.38
C9orf72-203ENST00000380003 CC2D1BQ5T0F9 858 aaKnown RBP6.45□□□□□ -1.38
C9orf72-203ENST00000380003 AEBP1Q8IUX7 1158 aa6.45□□□□□ -1.38
C9orf72-203ENST00000380003 POLKQ9UBT6 870 aa6.45□□□□□ -1.38
C9orf72-203ENST00000380003 TNS2Q63HR2 1409 aa6.45□□□□□ -1.38
C9orf72-203ENST00000380003 EYA1Q99502 592 aa6.44□□□□□ -1.38
C9orf72-203ENST00000380003 CDCA7Q9BWT1 371 aaPredicted RBP6.44□□□□□ -1.38
C9orf72-203ENST00000380003 STK32BQ9NY57 414 aa6.44□□□□□ -1.38
C9orf72-203ENST00000380003 PEAK1Q9H792 1746 aa6.44□□□□□ -1.38
C9orf72-203ENST00000380003 SBF2Q86WG5 1849 aa6.44□□□□□ -1.38
C9orf72-203ENST00000380003 PTGER2P43116 358 aa6.44□□□□□ -1.38
C9orf72-203ENST00000380003 NUP188Q5SRE5 1749 aa6.43□□□□□ -1.38
C9orf72-203ENST00000380003 CCNL1Q9UK58 526 aaPredicted RBP6.43□□□□□ -1.38
C9orf72-203ENST00000380003 TATP17735 454 aaPredicted RBP6.42□□□□□ -1.38
C9orf72-203ENST00000380003 EIF4A2Q14240 407 aaKnown RBP6.42□□□□□ -1.38
C9orf72-203ENST00000380003 SYT17Q9BSW7 474 aa6.42□□□□□ -1.38
C9orf72-203ENST00000380003 ASAP1Q9ULH1 1129 aa6.42□□□□□ -1.38
C9orf72-203ENST00000380003 CGNL1Q0VF96 1302 aa6.42□□□□□ -1.38
C9orf72-203ENST00000380003 HMOX1P09601 288 aa6.42□□□□□ -1.38
C9orf72-203ENST00000380003 CDCA8Q53HL2 280 aa6.42□□□□□ -1.38
C9orf72-203ENST00000380003 YY1P25490 414 aa6.42□□□□□ -1.38
C9orf72-203ENST00000380003 NLGN2Q8NFZ4 835 aa6.42□□□□□ -1.38
C9orf72-203ENST00000380003 PIGBQ92521 554 aa6.42□□□□□ -1.38
C9orf72-203ENST00000380003 FLT4P35916 1363 aa6.42□□□□□ -1.38
C9orf72-203ENST00000380003 PUS7Q96PZ0 661 aaKnown RBP6.41□□□□□ -1.38
C9orf72-203ENST00000380003 KIF7Q2M1P5 1343 aa6.41□□□□□ -1.38
C9orf72-203ENST00000380003 PNPLA7Q6ZV29 1317 aa6.41□□□□□ -1.38
C9orf72-203ENST00000380003 MORC1Q86VD1 984 aa6.41□□□□□ -1.38
C9orf72-203ENST00000380003 COL23A1Q86Y22 540 aaPredicted RBP6.41□□□□□ -1.38
C9orf72-203ENST00000380003 BTAF1O14981 1849 aa6.41□□□□□ -1.38
C9orf72-203ENST00000380003 PTCD1O75127 700 aaKnown RBP6.4□□□□□ -1.38
C9orf72-203ENST00000380003 NSD2O96028 1365 aa6.4□□□□□ -1.38
C9orf72-203ENST00000380003 INSRP06213 1382 aa6.4□□□□□ -1.38
C9orf72-203ENST00000380003 PARD3Q8TEW0 1356 aa6.4□□□□□ -1.38
C9orf72-203ENST00000380003 MYOM1P52179 1685 aa6.4□□□□□ -1.38
C9orf72-203ENST00000380003 NINLQ9Y2I6 1382 aa6.4□□□□□ -1.38
C9orf72-203ENST00000380003 SULT6B1Q6IMI4 303 aa6.4□□□□□ -1.38
C9orf72-203ENST00000380003 KNSTRNQ9Y448 316 aa6.4□□□□□ -1.38
C9orf72-203ENST00000380003 RREB1Q92766 1687 aa6.4□□□□□ -1.39
C9orf72-203ENST00000380003 AKT1S1Q96B36 256 aa6.4□□□□□ -1.39
C9orf72-203ENST00000380003 ARXQ96QS3 562 aa6.4□□□□□ -1.39
C9orf72-203ENST00000380003 RBM42Q9BTD8 480 aaKnown RBP6.4□□□□□ -1.39
C9orf72-203ENST00000380003 MTFR1LQ9H019 292 aa6.4□□□□□ -1.39
C9orf72-203ENST00000380003 SMG6Q86US8 1419 aaKnown RBP6.4□□□□□ -1.39
C9orf72-203ENST00000380003 WNK3Q9BYP7 1800 aa6.39□□□□□ -1.39
C9orf72-203ENST00000380003 WASHC2AQ641Q2 1341 aa6.39□□□□□ -1.39
C9orf72-203ENST00000380003 MTHFSP49914 203 aa6.39□□□□□ -1.39
C9orf72-203ENST00000380003 SGIP1Q9BQI5 828 aa6.39□□□□□ -1.39
C9orf72-203ENST00000380003 PALLDQ8WX93 1383 aa6.39□□□□□ -1.39
C9orf72-203ENST00000380003 FAM208AQ9UK61 1670 aaKnown RBP6.39□□□□□ -1.39
C9orf72-203ENST00000380003 MAP2P11137 1827 aaKnown RBP6.39□□□□□ -1.39
C9orf72-203ENST00000380003 SLC24A1O60721 1099 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 DSG3P32926 999 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 ITPK1Q13572 414 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 GPR162Q16538 588 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 DOT1LQ8TEK3 1739 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 PCDH11XQ9BZA7 1347 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 PCDH11YQ9BZA8 1340 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 ABCC6O95255 1503 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 ATP6V1AP38606 617 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 NFATC2IPQ8NCF5 419 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 SLC4A9Q96Q91 983 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.38□□□□□ -1.39
C9orf72-203ENST00000380003 PHKG2P15735 406 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 SLC39A6Q13433 755 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 LINC00116Q8NCU8 138 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 TMOD3Q9NYL9 352 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 TIMELESSQ9UNS1 1208 aa6.38□□□□□ -1.39
C9orf72-203ENST00000380003 SENP3-EIF4A1A0A087X0R7 540 aa6.37□□□□□ -1.39
C9orf72-203ENST00000380003 ZNF526Q8TF50 670 aaPredicted RBP6.37□□□□□ -1.39
C9orf72-203ENST00000380003 LGR6Q9HBX8 967 aa6.37□□□□□ -1.39
C9orf72-203ENST00000380003 LOC102724428A0A0B4J2F2 783 aa6.37□□□□□ -1.39
C9orf72-203ENST00000380003 U2SURPO15042 1029 aaKnown RBP6.37□□□□□ -1.39
C9orf72-203ENST00000380003 GNPATO15228 680 aa6.37□□□□□ -1.39
C9orf72-203ENST00000380003 SIK1P57059 783 aa6.37□□□□□ -1.39
C9orf72-203ENST00000380003 AMER1Q5JTC6 1135 aaPredicted RBP6.37□□□□□ -1.39
C9orf72-203ENST00000380003 ZNF530Q6P9A1 599 aaPredicted RBP6.37□□□□□ -1.39
C9orf72-203ENST00000380003 ATG3Q9NT62 314 aa6.37□□□□□ -1.39
C9orf72-203ENST00000380003 LRP5O75197 1615 aa6.37□□□□□ -1.39
C9orf72-203ENST00000380003 SPG7Q9UQ90 795 aa6.37□□□□□ -1.39
C9orf72-203ENST00000380003 NHSQ6T4R5 1651 aa6.36□□□□□ -1.39
C9orf72-203ENST00000380003 CLSPNQ9HAW4 1339 aa6.36□□□□□ -1.39
C9orf72-203ENST00000380003 SHANK3Q9BYB0 1731 aa6.36□□□□□ -1.39
C9orf72-203ENST00000380003 KIF20BQ96Q89 1820 aa6.36□□□□□ -1.39
C9orf72-203ENST00000380003 BCL9O00512 1426 aa6.36□□□□□ -1.39
C9orf72-203ENST00000380003 YBX3P16989 372 aaKnown RBP eCLIP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms