RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 KDRP35968 1356 aa18.82■□□□□ 0.6
PRNP-201ENST00000379440 ADGRL3Q9HAR2 1447 aa18.81■□□□□ 0.6
PRNP-201ENST00000379440 ZBTB7BO15156 539 aaPredicted RBP18.81■□□□□ 0.6
PRNP-201ENST00000379440 PSME1Q06323 249 aa18.81■□□□□ 0.6
PRNP-201ENST00000379440 SEC24BO95487 1268 aa18.8■□□□□ 0.6
PRNP-201ENST00000379440 CRB1P82279 1406 aa18.8■□□□□ 0.6
PRNP-201ENST00000379440 RTF1Q92541 710 aaKnown RBP18.79■□□□□ 0.6
PRNP-201ENST00000379440 ORAI2Q96SN7 254 aa18.79■□□□□ 0.6
PRNP-201ENST00000379440 C1orf115Q9H7X2 142 aa18.79■□□□□ 0.6
PRNP-201ENST00000379440 ABCC4O15439 1325 aa18.78■□□□□ 0.6
PRNP-201ENST00000379440 XPCQ01831 940 aaPredicted RBP18.77■□□□□ 0.6
PRNP-201ENST00000379440 SMC5Q8IY18 1101 aa18.77■□□□□ 0.6
PRNP-201ENST00000379440 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
PRNP-201ENST00000379440 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.59
PRNP-201ENST00000379440 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
PRNP-201ENST00000379440 GAS2L2Q8NHY3 880 aa18.76■□□□□ 0.59
PRNP-201ENST00000379440 API5Q9BZZ5 524 aaKnown RBP18.76■□□□□ 0.59
PRNP-201ENST00000379440 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
PRNP-201ENST00000379440 ZBTB7CA1YPR0 619 aa18.76■□□□□ 0.59
PRNP-201ENST00000379440 SLC4A3P48751 1232 aa18.75■□□□□ 0.59
PRNP-201ENST00000379440 NBR1Q14596 966 aa18.75■□□□□ 0.59
PRNP-201ENST00000379440 GLIPR1L2Q4G1C9 344 aa18.75■□□□□ 0.59
PRNP-201ENST00000379440 TSPYL4Q9UJ04 414 aa18.75■□□□□ 0.59
PRNP-201ENST00000379440 NWD1Q149M9 1564 aa18.75■□□□□ 0.59
PRNP-201ENST00000379440 USP19O94966 1318 aa18.75■□□□□ 0.59
PRNP-201ENST00000379440 KIAA0232Q92628 1395 aa18.74■□□□□ 0.59
PRNP-201ENST00000379440 KLHL34Q8N239 644 aa18.74■□□□□ 0.59
PRNP-201ENST00000379440 VIRMAQ69YN4 1812 aaKnown RBP18.73■□□□□ 0.59
PRNP-201ENST00000379440 PROSER2Q86WR7 435 aaPredicted RBP18.73■□□□□ 0.59
PRNP-201ENST00000379440 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
PRNP-201ENST00000379440 IP6K1Q92551 441 aa18.72■□□□□ 0.59
PRNP-201ENST00000379440 GNAT3A8MTJ3 354 aa18.72■□□□□ 0.59
PRNP-201ENST00000379440 HAP1P54257 671 aaPredicted RBP18.71■□□□□ 0.59
PRNP-201ENST00000379440 SIRT2Q8IXJ6 389 aa18.71■□□□□ 0.59
PRNP-201ENST00000379440 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
PRNP-201ENST00000379440 LTN1O94822 1766 aa18.71■□□□□ 0.59
PRNP-201ENST00000379440 SLC4A2P04920 1241 aa18.7■□□□□ 0.58
PRNP-201ENST00000379440 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
PRNP-201ENST00000379440 LNPKQ9C0E8 428 aa18.7■□□□□ 0.58
PRNP-201ENST00000379440 NFAT5O94916 1531 aa18.7■□□□□ 0.58
PRNP-201ENST00000379440 RTL1A6NKG5 1358 aa18.7■□□□□ 0.58
PRNP-201ENST00000379440 NUCB1Q02818 461 aa18.7■□□□□ 0.58
PRNP-201ENST00000379440 NBPF6Q5VWK0 638 aa18.7■□□□□ 0.58
PRNP-201ENST00000379440 IL17REQ8NFR9 667 aa18.7■□□□□ 0.58
PRNP-201ENST00000379440 NBPF4Q96M43 638 aa18.7■□□□□ 0.58
PRNP-201ENST00000379440 HTATSF1O43719 755 aaKnown RBP18.69■□□□□ 0.58
PRNP-201ENST00000379440 RGS12O14924 1447 aa18.69■□□□□ 0.58
PRNP-201ENST00000379440 KCNH5Q8NCM2 988 aa18.68■□□□□ 0.58
PRNP-201ENST00000379440 INTS3Q68E01 1043 aaKnown RBP18.68■□□□□ 0.58
PRNP-201ENST00000379440 CHD1LQ86WJ1 897 aa18.67■□□□□ 0.58
PRNP-201ENST00000379440 MSH6P52701 1360 aa18.67■□□□□ 0.58
PRNP-201ENST00000379440 G2E3Q7L622 706 aa18.67■□□□□ 0.58
PRNP-201ENST00000379440 LRRC59Q96AG4 307 aaKnown RBP18.67■□□□□ 0.58
PRNP-201ENST00000379440 GCP02774 474 aa18.67■□□□□ 0.58
PRNP-201ENST00000379440 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
PRNP-201ENST00000379440 MAP3K5Q99683 1374 aa18.66■□□□□ 0.58
PRNP-201ENST00000379440 PTPRCP08575 1304 aa18.65■□□□□ 0.58
PRNP-201ENST00000379440 KRT28Q7Z3Y7 464 aa18.65■□□□□ 0.58
PRNP-201ENST00000379440 GCC1Q96CN9 775 aa18.65■□□□□ 0.58
PRNP-201ENST00000379440 NECTIN2Q92692 538 aa18.64■□□□□ 0.57
PRNP-201ENST00000379440 C19orf44Q9H6X5 657 aa18.64■□□□□ 0.57
PRNP-201ENST00000379440 ZMYND15Q9H091 742 aa18.64■□□□□ 0.57
PRNP-201ENST00000379440 TAF7Q15545 349 aaPredicted RBP18.63■□□□□ 0.57
PRNP-201ENST00000379440 ARHGEF25Q86VW2 580 aa18.63■□□□□ 0.57
PRNP-201ENST00000379440 LRRC37A3O60309 1634 aa18.63■□□□□ 0.57
PRNP-201ENST00000379440 F6X3S4 739 aa18.63■□□□□ 0.57
PRNP-201ENST00000379440 ARXQ96QS3 562 aa18.63■□□□□ 0.57
PRNP-201ENST00000379440 C1orf167Q5SNV9 1468 aa18.62■□□□□ 0.57
PRNP-201ENST00000379440 RTL5Q5HYW3 569 aaPredicted RBP18.62■□□□□ 0.57
PRNP-201ENST00000379440 SLC4A10Q6U841 1118 aa18.61■□□□□ 0.57
PRNP-201ENST00000379440 MEIS3Q99687 375 aa18.61■□□□□ 0.57
PRNP-201ENST00000379440 RGPD2P0DJD1 1756 aa18.61■□□□□ 0.57
PRNP-201ENST00000379440 UPF2Q9HAU5 1272 aaKnown RBP18.61■□□□□ 0.57
PRNP-201ENST00000379440 LGR6Q9HBX8 967 aa18.61■□□□□ 0.57
PRNP-201ENST00000379440 DDX17Q92841 729 aaKnown RBP18.6■□□□□ 0.57
PRNP-201ENST00000379440 TBC1D32Q96NH3 1257 aa18.6■□□□□ 0.57
PRNP-201ENST00000379440 STK31Q9BXU1 1019 aa18.6■□□□□ 0.57
PRNP-201ENST00000379440 AXIN2Q9Y2T1 843 aa18.6■□□□□ 0.57
PRNP-201ENST00000379440 TMEM94Q12767 1356 aa18.58■□□□□ 0.57
PRNP-201ENST00000379440 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.57
PRNP-201ENST00000379440 SLIT3O75094 1523 aa18.58■□□□□ 0.57
PRNP-201ENST00000379440 HSPA2P54652 639 aa18.58■□□□□ 0.56
PRNP-201ENST00000379440 CCDC30Q5VVM6 783 aa18.58■□□□□ 0.56
PRNP-201ENST00000379440 ANKRD24Q8TF21 1146 aa18.58■□□□□ 0.56
PRNP-201ENST00000379440 ATP10DQ9P241 1426 aa18.58■□□□□ 0.56
PRNP-201ENST00000379440 ANKRD44Q8N8A2 993 aa18.57■□□□□ 0.56
PRNP-201ENST00000379440 TRPM3Q9HCF6 1732 aaPredicted RBP18.57■□□□□ 0.56
PRNP-201ENST00000379440 ATF3P18847 181 aa18.57■□□□□ 0.56
PRNP-201ENST00000379440 CEP85Q6P2H3 762 aa18.57■□□□□ 0.56
PRNP-201ENST00000379440 DCTPP1Q9H773 170 aa18.57■□□□□ 0.56
PRNP-201ENST00000379440 ZC3H6P61129 1189 aaKnown RBP18.57■□□□□ 0.56
PRNP-201ENST00000379440 PHRF1Q9P1Y6 1649 aaKnown RBP18.56■□□□□ 0.56
PRNP-201ENST00000379440 CEMIPQ8WUJ3 1361 aa18.56■□□□□ 0.56
PRNP-201ENST00000379440 FLIIQ13045 1269 aa18.56■□□□□ 0.56
PRNP-201ENST00000379440 ZNF530Q6P9A1 599 aaPredicted RBP18.56■□□□□ 0.56
PRNP-201ENST00000379440 MPRIPQ6WCQ1 1025 aa18.56■□□□□ 0.56
PRNP-201ENST00000379440 BABAM1Q9NWV8 329 aa18.56■□□□□ 0.56
PRNP-201ENST00000379440 FKBP5Q13451 457 aaPredicted RBP18.55■□□□□ 0.56
PRNP-201ENST00000379440 RPAP2Q8IXW5 612 aaPredicted RBP18.55■□□□□ 0.56
PRNP-201ENST00000379440 STRCP1A6NGW2 1772 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms