RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 TATP17735 454 aaPredicted RBP31.89■■■□□ 2.7
ECHDC3-201ENST00000379215 TOM1L2Q6ZVM7 507 aa31.89■■■□□ 2.7
ECHDC3-201ENST00000379215 FANCIQ9NVI1 1328 aa31.89■■■□□ 2.7
ECHDC3-201ENST00000379215 CT47B1P0C2W7 299 aaPredicted RBP31.89■■■□□ 2.7
ECHDC3-201ENST00000379215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.89■■■□□ 2.7
ECHDC3-201ENST00000379215 CARD10Q9BWT7 1032 aa31.88■■■□□ 2.69
ECHDC3-201ENST00000379215 CFAP44Q96MT7 982 aa31.87■■■□□ 2.69
ECHDC3-201ENST00000379215 RNF123Q5XPI4 1314 aa31.87■■■□□ 2.69
ECHDC3-201ENST00000379215 BTG4Q9NY30 223 aa31.86■■■□□ 2.69
ECHDC3-201ENST00000379215 CRB1P82279 1406 aa31.85■■■□□ 2.69
ECHDC3-201ENST00000379215 AKAP4Q5JQC9 854 aa31.85■■■□□ 2.69
ECHDC3-201ENST00000379215 THUMPD2Q9BTF0 503 aaKnown RBP31.85■■■□□ 2.69
ECHDC3-201ENST00000379215 ZNF853P0CG23 659 aa31.84■■■□□ 2.69
ECHDC3-201ENST00000379215 ZNF530Q6P9A1 599 aaPredicted RBP31.84■■■□□ 2.69
ECHDC3-201ENST00000379215 STRN4Q9NRL3 753 aa31.84■■■□□ 2.69
ECHDC3-201ENST00000379215 SPG7Q9UQ90 795 aa31.84■■■□□ 2.69
ECHDC3-201ENST00000379215 SPATA31A6Q5VVP1 1343 aa31.84■■■□□ 2.69
ECHDC3-201ENST00000379215 C1orf141Q5JVX7 400 aa31.83■■■□□ 2.69
ECHDC3-201ENST00000379215 MCM10Q7L590 875 aa31.82■■■□□ 2.69
ECHDC3-201ENST00000379215 DCTN1Q14203 1278 aa31.82■■■□□ 2.68
ECHDC3-201ENST00000379215 MEGF6O75095 1541 aa31.82■■■□□ 2.68
ECHDC3-201ENST00000379215 LRRC37A3O60309 1634 aa31.81■■■□□ 2.68
ECHDC3-201ENST00000379215 OVOS2A0A0G2JMS6 1433 aa31.81■■■□□ 2.68
ECHDC3-201ENST00000379215 TSR2Q969E8 191 aaKnown RBP31.81■■■□□ 2.68
ECHDC3-201ENST00000379215 LARP1Q6PKG0 1096 aaKnown RBP31.8■■■□□ 2.68
ECHDC3-201ENST00000379215 LAS1LQ9Y4W2 734 aaKnown RBP31.8■■■□□ 2.68
ECHDC3-201ENST00000379215 PARP4Q9UKK3 1724 aaKnown RBP31.8■■■□□ 2.68
ECHDC3-201ENST00000379215 ADAMTS2O95450 1211 aa31.79■■■□□ 2.68
ECHDC3-201ENST00000379215 NUTM2BA6NNL0 878 aaPredicted RBP31.78■■■□□ 2.68
ECHDC3-201ENST00000379215 NUTM2EB1AL46 878 aaPredicted RBP31.78■■■□□ 2.68
ECHDC3-201ENST00000379215 NUTM2AQ8IVF1 878 aaPredicted RBP31.78■■■□□ 2.68
ECHDC3-201ENST00000379215 PLCH1Q4KWH8 1693 aa31.78■■■□□ 2.68
ECHDC3-201ENST00000379215 BABAM1Q9NWV8 329 aa31.78■■■□□ 2.68
ECHDC3-201ENST00000379215 PKD1L3Q7Z443 1732 aa31.76■■■□□ 2.68
ECHDC3-201ENST00000379215 RRP1P56182 461 aaKnown RBP31.76■■■□□ 2.67
ECHDC3-201ENST00000379215 MBIPQ9NS73 344 aa31.76■■■□□ 2.67
ECHDC3-201ENST00000379215 CEMIPQ8WUJ3 1361 aa31.76■■■□□ 2.67
ECHDC3-201ENST00000379215 CHL1O00533 1208 aa31.75■■■□□ 2.67
ECHDC3-201ENST00000379215 IL2RBP14784 551 aa31.75■■■□□ 2.67
ECHDC3-201ENST00000379215 NWD2Q9ULI1 1742 aa31.75■■■□□ 2.67
ECHDC3-201ENST00000379215 EXOSC9Q06265 439 aaKnown RBP31.75■■■□□ 2.67
ECHDC3-201ENST00000379215 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.75■■■□□ 2.67
ECHDC3-201ENST00000379215 ZNF428Q96B54 188 aa31.75■■■□□ 2.67
ECHDC3-201ENST00000379215 IL17REQ8NFR9 667 aa31.73■■■□□ 2.67
ECHDC3-201ENST00000379215 ERICH6BQ5W0A0 696 aa31.72■■■□□ 2.67
ECHDC3-201ENST00000379215 SLIT2O94813 1529 aa31.72■■■□□ 2.67
ECHDC3-201ENST00000379215 HSP90AB1P08238 724 aaKnown RBP31.71■■■□□ 2.67
ECHDC3-201ENST00000379215 HSPA1LP34931 641 aa31.71■■■□□ 2.67
ECHDC3-201ENST00000379215 FKBP8Q14318 412 aa31.71■■■□□ 2.67
ECHDC3-201ENST00000379215 IFNL2Q8IZJ0 200 aa31.71■■■□□ 2.67
ECHDC3-201ENST00000379215 NRAPQ86VF7 1730 aa31.71■■■□□ 2.67
ECHDC3-201ENST00000379215 TAF7Q15545 349 aaPredicted RBP31.69■■■□□ 2.66
ECHDC3-201ENST00000379215 PCDH11XQ9BZA7 1347 aa31.69■■■□□ 2.66
ECHDC3-201ENST00000379215 PCDH11YQ9BZA8 1340 aa31.69■■■□□ 2.66
ECHDC3-201ENST00000379215 PHKG2P15735 406 aa31.68■■■□□ 2.66
ECHDC3-201ENST00000379215 TSPYL4Q9UJ04 414 aa31.68■■■□□ 2.66
ECHDC3-201ENST00000379215 RARSP54136 660 aaKnown RBP31.67■■■□□ 2.66
ECHDC3-201ENST00000379215 ZCRB1Q8TBF4 217 aaKnown RBP31.67■■■□□ 2.66
ECHDC3-201ENST00000379215 ADAMTS7Q9UKP4 1686 aa31.67■■■□□ 2.66
ECHDC3-201ENST00000379215 RNMTO43148 476 aaKnown RBP31.67■■■□□ 2.66
ECHDC3-201ENST00000379215 TEFQ10587 303 aa31.67■■■□□ 2.66
ECHDC3-201ENST00000379215 THRAP3Q9Y2W1 955 aaKnown RBP31.67■■■□□ 2.66
ECHDC3-201ENST00000379215 CDCA7Q9BWT1 371 aaPredicted RBP31.65■■■□□ 2.66
ECHDC3-201ENST00000379215 MPRIPQ6WCQ1 1025 aa31.64■■■□□ 2.66
ECHDC3-201ENST00000379215 DCAF5Q96JK2 942 aa31.64■■■□□ 2.65
ECHDC3-201ENST00000379215 ALDH1L2Q3SY69 923 aa31.63■■■□□ 2.65
ECHDC3-201ENST00000379215 DISP2A7MBM2 1401 aa31.63■■■□□ 2.65
ECHDC3-201ENST00000379215 LGR6Q9HBX8 967 aa31.62■■■□□ 2.65
ECHDC3-201ENST00000379215 USP35Q9P2H5 1018 aa31.62■■■□□ 2.65
ECHDC3-201ENST00000379215 SOS1Q07889 1333 aaPredicted RBP31.61■■■□□ 2.65
ECHDC3-201ENST00000379215 NGLY1Q96IV0 654 aa31.61■■■□□ 2.65
ECHDC3-201ENST00000379215 CYP27B1O15528 508 aa31.6■■■□□ 2.65
ECHDC3-201ENST00000379215 TWISTNBQ3B726 338 aaPredicted RBP31.6■■■□□ 2.65
ECHDC3-201ENST00000379215 UNC5CLQ8IV45 518 aa31.6■■■□□ 2.65
ECHDC3-201ENST00000379215 C8orf37Q96NL8 207 aa31.6■■■□□ 2.65
ECHDC3-201ENST00000379215 LRP6O75581 1613 aa31.6■■■□□ 2.65
ECHDC3-201ENST00000379215 SPATA31A1Q5TZJ5 1347 aa31.6■■■□□ 2.65
ECHDC3-201ENST00000379215 FNBP4Q8N3X1 1017 aaPredicted RBP31.59■■■□□ 2.65
ECHDC3-201ENST00000379215 VAMP4O75379 141 aa31.58■■■□□ 2.65
ECHDC3-201ENST00000379215 BCAR3O75815 825 aa31.58■■■□□ 2.65
ECHDC3-201ENST00000379215 KDM6AO15550 1401 aaPredicted RBP31.58■■■□□ 2.65
ECHDC3-201ENST00000379215 SPATA31A5Q5VU36 1347 aa31.57■■■□□ 2.64
ECHDC3-201ENST00000379215 SPATA31A7Q8IWB4 1347 aa31.57■■■□□ 2.64
ECHDC3-201ENST00000379215 IRX6P78412 446 aaPredicted RBP31.57■■■□□ 2.64
ECHDC3-201ENST00000379215 SMC4Q9NTJ3 1288 aa31.57■■■□□ 2.64
ECHDC3-201ENST00000379215 MRC1P22897 1456 aa31.56■■■□□ 2.64
ECHDC3-201ENST00000379215 SCN11AQ9UI33 1791 aa31.56■■■□□ 2.64
ECHDC3-201ENST00000379215 CANXP27824 592 aaKnown RBP31.56■■■□□ 2.64
ECHDC3-201ENST00000379215 C8orf58Q8NAV2 365 aa31.56■■■□□ 2.64
ECHDC3-201ENST00000379215 WNK3Q9BYP7 1800 aa31.55■■■□□ 2.64
ECHDC3-201ENST00000379215 NKX1-1Q15270 411 aaPredicted RBP31.55■■■□□ 2.64
ECHDC3-201ENST00000379215 MEX3CQ5U5Q3 659 aaKnown RBP31.55■■■□□ 2.64
ECHDC3-201ENST00000379215 BTBD11A6QL63 1104 aa31.54■■■□□ 2.64
ECHDC3-201ENST00000379215 MIS18AQ9NYP9 233 aa31.54■■■□□ 2.64
ECHDC3-201ENST00000379215 KIF16BQ96L93 1317 aa31.54■■■□□ 2.64
ECHDC3-201ENST00000379215 VIRMAQ69YN4 1812 aaKnown RBP31.54■■■□□ 2.64
ECHDC3-201ENST00000379215 BRPF1P55201 1214 aaPredicted RBP31.53■■■□□ 2.64
ECHDC3-201ENST00000379215 VPS72Q15906 364 aa31.53■■■□□ 2.64
ECHDC3-201ENST00000379215 BARGINQ6ZT62 677 aa31.53■■■□□ 2.64
ECHDC3-201ENST00000379215 TSPYL6Q8N831 410 aa31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms