RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 RRP12Q5JTH9 1297 aaKnown RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 ODF2Q5BJF6 829 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 MUM1L1Q5H9M0 696 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 DONSONQ9NYP3 566 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 VIRMAQ69YN4 1812 aaKnown RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC175P0C221 793 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 RGS22Q8NE09 1264 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 ENOX2Q16206 610 aaKnown RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 GOLGA5Q8TBA6 731 aa4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 RRP1P56182 461 aaKnown RBP4.04□□□□□ -1.76
PKHD1L1-201ENST00000378402 KIAA0753Q2KHM9 967 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 PLPPR3Q6T4P5 718 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 MYBBP1AQ9BQG0 1328 aaKnown RBP4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 RWDD2BP57060 319 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 PDCD7Q8N8D1 485 aaKnown RBP4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 SCAF11Q99590 1463 aaKnown RBP4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCT6AP40227 531 aaKnown RBP4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 ARFGAP2Q8N6H7 521 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 RUBCNQ92622 972 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 SMC2O95347 1197 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 TAF7Q15545 349 aaPredicted RBP4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 VCXQ9H320 206 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC152Q4G0S7 254 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 ICE2Q659A1 982 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 VCX3BQ9H321 246 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 VCX3AQ9NNX9 186 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 DHX57Q6P158 1386 aaKnown RBP4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 FHOD3Q2V2M9 1422 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 DBN1Q16643 649 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 WWC2Q6AWC2 1192 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 EHBP1Q8NDI1 1231 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 CEP126Q9P2H0 1117 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 ARHGAP35Q9NRY4 1499 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 CCDC192P0DO97 292 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 PLCD3Q8N3E9 789 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 SEPT2Q15019 361 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 JADE2Q9NQC1 790 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 POLE3Q9NRF9 147 aa4.03□□□□□ -1.76
PKHD1L1-201ENST00000378402 SMIM24O75264 130 aa4.03□□□□□ -1.77
PKHD1L1-201ENST00000378402 MCM4P33991 863 aa4.03□□□□□ -1.77
PKHD1L1-201ENST00000378402 DRP2Q13474 957 aa4.03□□□□□ -1.77
PKHD1L1-201ENST00000378402 BRAPQ7Z569 592 aa4.03□□□□□ -1.77
PKHD1L1-201ENST00000378402 DRC7Q8IY82 874 aa4.03□□□□□ -1.77
PKHD1L1-201ENST00000378402 DYNC1I2Q13409 638 aaKnown RBP4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 SNX21Q969T3 373 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 PSD3Q9NYI0 1048 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 PTPRGP23470 1445 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 TMEM232C9JQI7 657 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 EXOC4Q96A65 974 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 ABCA5Q8WWZ7 1642 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 ICA1Q05084 483 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 DZIP1Q86YF9 867 aaKnown RBP4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 TRIM6Q9C030 488 aaPredicted RBP4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 NBPF10Q6P3W6 841 aaKnown RBP4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 LMOD2Q6P5Q4 547 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 RPUSD2Q8IZ73 545 aaKnown RBP4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 TRIM5Q9C035 493 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 LARSQ9P2J5 1176 aaKnown RBP4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 SMTNL1A8MU46 457 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 CHCHD3Q9NX63 227 aaKnown RBP4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 THEGQ9P2T0 379 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 E9PSI1 815 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 CRYMQ14894 314 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 ARHGAP18Q8N392 663 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 FRMD4BQ9Y2L6 1034 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 TMF1P82094 1093 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 PIBF1Q8WXW3 757 aa4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 CWC25Q9NXE8 425 aaPredicted RBP4.02□□□□□ -1.77
PKHD1L1-201ENST00000378402 PEG3Q9GZU2 1588 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 ARFGAP3Q9NP61 516 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 RAD54L2Q9Y4B4 1467 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 EBAG9O00559 213 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 TSR1Q2NL82 804 aaKnown RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 GIGYF2Q6Y7W6 1299 aaKnown RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 UBXN4Q92575 508 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 MIS18AQ9NYP9 233 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 SGSM2O43147 1006 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 ZFXP17010 805 aaPredicted RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 THOC2Q8NI27 1593 aaKnown RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 HSP90AA5PQ58FG0 334 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 CBFA2T2O43439 604 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 PPP1R15AO75807 674 aaPredicted RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 FBLN2P98095 1184 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 AIMP1Q12904 312 aaKnown RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 TSC22D1Q15714 1073 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 ANKS4BQ8N8V4 417 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 CRACR2AQ9BSW2 395 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 ZNF445P59923 1031 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 MAPK8IP2Q13387 824 aaPredicted RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 CLUL1Q15846 466 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 SWT1Q5T5J6 900 aaKnown RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 DDX46Q7L014 1031 aaKnown RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 RRP7AQ9Y3A4 280 aaKnown RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 SNW1Q13573 536 aaKnown RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 SEC62Q99442 399 aaKnown RBP4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 MAGEA9P43362 315 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 CCDC80Q76M96 950 aa4.01□□□□□ -1.77
PKHD1L1-201ENST00000378402 CCDC150Q8NCX0 1101 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 176.4 ms