RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 FKBP4Q02790 459 aaKnown RBP eCLIP21.36■■□□□ 1.01
CLSTN1-202ENST00000377298 ADAMTS2O95450 1211 aa21.35■■□□□ 1.01
CLSTN1-202ENST00000377298 MPRIPQ6WCQ1 1025 aa21.35■■□□□ 1.01
CLSTN1-202ENST00000377298 IL1RAPL2Q9NP60 686 aa21.35■■□□□ 1.01
CLSTN1-202ENST00000377298 KIF1BPQ96EK5 621 aa21.35■■□□□ 1.01
CLSTN1-202ENST00000377298 TTC21AQ8NDW8 1320 aa21.35■■□□□ 1.01
CLSTN1-202ENST00000377298 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
CLSTN1-202ENST00000377298 CTNNA3Q9UI47 895 aa21.34■■□□□ 1.01
CLSTN1-202ENST00000377298 RAB11FIP3O75154 756 aa21.34■■□□□ 1.01
CLSTN1-202ENST00000377298 SDF4Q9BRK5 362 aa21.34■■□□□ 1.01
CLSTN1-202ENST00000377298 EXOC5O00471 708 aa21.33■■□□□ 1.01
CLSTN1-202ENST00000377298 DBF4Q9UBU7 674 aaPredicted RBP21.33■■□□□ 1.01
CLSTN1-202ENST00000377298 HSP90AB3PQ58FF7 597 aa21.33■■□□□ 1
CLSTN1-202ENST00000377298 FMNL2Q96PY5 1086 aa21.33■■□□□ 1
CLSTN1-202ENST00000377298 HYPKQ9NX55 129 aa21.33■■□□□ 1
CLSTN1-202ENST00000377298 BICDL1Q6ZP65 573 aa21.32■■□□□ 1
CLSTN1-202ENST00000377298 RIMS2Q9UQ26 1411 aa21.32■■□□□ 1
CLSTN1-202ENST00000377298 IFNL2Q8IZJ0 200 aa21.32■■□□□ 1
CLSTN1-202ENST00000377298 GOLGA6L1Q8N7Z2 621 aa21.32■■□□□ 1
CLSTN1-202ENST00000377298 WDR62O43379 1518 aa21.32■■□□□ 1
CLSTN1-202ENST00000377298 MBD3O95983 291 aa21.32■■□□□ 1
CLSTN1-202ENST00000377298 NAT10Q9H0A0 1025 aaKnown RBP21.32■■□□□ 1
CLSTN1-202ENST00000377298 AKAP2Q9Y2D5 859 aa21.32■■□□□ 1
CLSTN1-202ENST00000377298 TCOF1Q13428 1488 aaKnown RBP21.32■■□□□ 1
CLSTN1-202ENST00000377298 MSH6P52701 1360 aa21.31■■□□□ 1
CLSTN1-202ENST00000377298 MAP4K4O95819 1239 aaPredicted RBP21.31■■□□□ 1
CLSTN1-202ENST00000377298 NGLY1Q96IV0 654 aa21.31■■□□□ 1
CLSTN1-202ENST00000377298 ZNF396Q96N95 335 aaPredicted RBP21.31■■□□□ 1
CLSTN1-202ENST00000377298 BACH2Q9BYV9 841 aa21.31■■□□□ 1
CLSTN1-202ENST00000377298 RALGAPBQ86X10 1494 aa21.3■■□□□ 1
CLSTN1-202ENST00000377298 A0A0U1RQG5 324 aaPredicted RBP21.3■■□□□ 1
CLSTN1-202ENST00000377298 OLFM4Q6UX06 510 aa21.3■■□□□ 1
CLSTN1-202ENST00000377298 CCAR1Q8IX12 1150 aaKnown RBP21.3■■□□□ 1
CLSTN1-202ENST00000377298 TRIM22Q8IYM9 498 aa21.3■■□□□ 1
CLSTN1-202ENST00000377298 EXOC6BQ9Y2D4 811 aa21.3■■□□□ 1
CLSTN1-202ENST00000377298 ZPR1O75312 459 aa21.3■■□□□ 1
CLSTN1-202ENST00000377298 DNAAF4Q8WXU2 420 aa21.3■■□□□ 1
CLSTN1-202ENST00000377298 MYD88Q99836 296 aa21.3■■□□□ 1
CLSTN1-202ENST00000377298 KRT32Q14532 448 aa21.3■■□□□ 1
CLSTN1-202ENST00000377298 AEBP1Q8IUX7 1158 aa21.29■■□□□ 1
CLSTN1-202ENST00000377298 METTL24Q5JXM2 366 aa21.29■■□□□ 1
CLSTN1-202ENST00000377298 BLOC1S2Q6QNY1 142 aa21.29■■□□□ 1
CLSTN1-202ENST00000377298 TEX13AQ9BXU3 409 aaPredicted RBP21.29■■□□□ 1
CLSTN1-202ENST00000377298 PTPRCP08575 1304 aa21.29■■□□□ 1
CLSTN1-202ENST00000377298 GLRX3O76003 335 aaKnown RBP21.29■■□□□ 1
CLSTN1-202ENST00000377298 CNKSR2Q8WXI2 1034 aa21.28■■□□□ 1
CLSTN1-202ENST00000377298 LETM1O95202 739 aaPredicted RBP21.28■■□□□ 1
CLSTN1-202ENST00000377298 ANKRD24Q8TF21 1146 aa21.28■■□□□ 1
CLSTN1-202ENST00000377298 RAI14Q9P0K7 980 aa21.28■■□□□ 1
CLSTN1-202ENST00000377298 ABCC2Q92887 1545 aa21.28■■□□□ 1
CLSTN1-202ENST00000377298 CCDC85AQ96PX6 553 aaPredicted RBP21.28■■□□□ 1
CLSTN1-202ENST00000377298 LRP2BPQ9P2M1 347 aa21.28■■□□□ 1
CLSTN1-202ENST00000377298 IL16Q14005 1332 aa21.27■■□□□ 1
CLSTN1-202ENST00000377298 PUS7Q96PZ0 661 aaKnown RBP21.27■■□□□ 1
CLSTN1-202ENST00000377298 CCDC69A6NI79 296 aa21.27■■□□□ 1
CLSTN1-202ENST00000377298 ATP2B1P20020 1258 aa21.27■■□□□ 1
CLSTN1-202ENST00000377298 EIF4G3O43432 1585 aaKnown RBP21.27■■□□□ 1
CLSTN1-202ENST00000377298 KINO60870 393 aaKnown RBP21.27■■□□□ 1
CLSTN1-202ENST00000377298 CCDC70Q6NSX1 233 aa21.27■■□□□ 1
CLSTN1-202ENST00000377298 CWC27Q6UX04 472 aaKnown RBP21.27■□□□□ 0.99
CLSTN1-202ENST00000377298 JMYQ8N9B5 988 aa21.27■□□□□ 0.99
CLSTN1-202ENST00000377298 SHANK2Q9UPX8 1470 aa21.27■□□□□ 0.99
CLSTN1-202ENST00000377298 NPHP3Q7Z494 1330 aa21.26■□□□□ 0.99
CLSTN1-202ENST00000377298 TXLNAP40222 546 aa21.26■□□□□ 0.99
CLSTN1-202ENST00000377298 PRAG1Q86YV5 1406 aa21.26■□□□□ 0.99
CLSTN1-202ENST00000377298 KDM4AO75164 1064 aa21.26■□□□□ 0.99
CLSTN1-202ENST00000377298 TDO2P48775 406 aa21.26■□□□□ 0.99
CLSTN1-202ENST00000377298 K7ELQ4 463 aaPredicted RBP21.25■□□□□ 0.99
CLSTN1-202ENST00000377298 MX1P20591 662 aa21.25■□□□□ 0.99
CLSTN1-202ENST00000377298 IFIT1P09914 478 aaKnown RBP21.25■□□□□ 0.99
CLSTN1-202ENST00000377298 STK38Q15208 465 aa21.25■□□□□ 0.99
CLSTN1-202ENST00000377298 ZSCAN31Q96LW9 406 aaPredicted RBP21.25■□□□□ 0.99
CLSTN1-202ENST00000377298 NUTM1Q86Y26 1132 aa21.25■□□□□ 0.99
CLSTN1-202ENST00000377298 IDH1O75874 414 aaKnown RBP21.24■□□□□ 0.99
CLSTN1-202ENST00000377298 FLIIQ13045 1269 aa21.24■□□□□ 0.99
CLSTN1-202ENST00000377298 ATP2B2Q01814 1243 aa21.24■□□□□ 0.99
CLSTN1-202ENST00000377298 RBM5P52756 815 aaKnown RBP eCLIP21.24■□□□□ 0.991e-6■■■■■ 30
CLSTN1-202ENST00000377298 CCAR2Q8N163 923 aaKnown RBP21.24■□□□□ 0.99
CLSTN1-202ENST00000377298 IFIT5Q13325 482 aaKnown RBP21.23■□□□□ 0.99
CLSTN1-202ENST00000377298 CDKL5O76039 1030 aa21.23■□□□□ 0.99
CLSTN1-202ENST00000377298 WDR33Q9C0J8 1336 aaKnown RBP21.23■□□□□ 0.99
CLSTN1-202ENST00000377298 PPIP5K1Q6PFW1 1433 aa21.23■□□□□ 0.99
CLSTN1-202ENST00000377298 F6X3S4 739 aa21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 UBAC1Q9BSL1 405 aa21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 AIDAQ96BJ3 306 aa21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 CAVIN4Q5BKX8 364 aa21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 PDRG1Q9NUG6 133 aa21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 TRMT112Q9UI30 125 aaKnown RBP21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 R3HCC1Q9Y3T6 440 aaKnown RBP21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 CDK5RAP3Q96JB5 506 aa21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 JAKMIP1Q96N16 626 aaKnown RBP21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 STK3Q13188 491 aa21.22■□□□□ 0.99
CLSTN1-202ENST00000377298 TRAK2O60296 914 aa21.21■□□□□ 0.99
CLSTN1-202ENST00000377298 HOMER1Q86YM7 354 aa21.21■□□□□ 0.99
CLSTN1-202ENST00000377298 FIBPO43427 364 aa21.21■□□□□ 0.99
CLSTN1-202ENST00000377298 KIF21AQ7Z4S6 1674 aa21.2■□□□□ 0.98
CLSTN1-202ENST00000377298 IMMTQ16891 758 aaKnown RBP21.2■□□□□ 0.98
CLSTN1-202ENST00000377298 PDIA4P13667 645 aaKnown RBP21.2■□□□□ 0.98
CLSTN1-202ENST00000377298 A0A087WZG4 1122 aa21.2■□□□□ 0.98
CLSTN1-202ENST00000377298 CHRNA2Q15822 529 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms